Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbm4.3

Gene Name Gene ID Reads Annotation
rbm4.3 ENSDARG00000022129 28571 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]










Genes with expression patterns similar to rbm4.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm4.3 ENSDARG00000022129 28571 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
2. ctnnb1 ENSDARG00000014571 12004 3.268 - - - - 0.880 0.731 0.945 0.712 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
3. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.994 0.736 - - - 0.742 0.807 - 0.709 - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
4. h3f3d ENSDARG00000045248 43757 2.618 - - - - - 0.815 0.963 0.840 - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
5. SERBP1 SERBP1 9276 2.616 - - - 0.931 0.800 0.885 - - -
6. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.543 0.786 - - - - - 0.975 0.782 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
7. hnrnpa0a ENSDARG00000089302 45675 2.505 0.767 - 0.883 - 0.855 - - - - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
8. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.494 - - - 0.920 0.827 - - 0.747 - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
9. h2afvb ENSDARG00000116491 35692 2.484 0.740 - - - - 0.864 - 0.880 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
10. hnrnpab hnrnpab 72354 2.472 - - - - - 0.887 0.848 0.737 -
11. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.425 - 0.812 - - - 0.788 - 0.825 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
12. si:ch211-51e12.7 ENSDARG00000045914 9598 2.416 0.738 - - - - 0.783 - - 0.895 si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
13. tuba1c ENSDARG00000055216 8384 2.415 - - - 0.932 - 0.707 - 0.776 - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. tmpoa ENSDARG00000007315 3638 2.412 - - - - 0.829 0.738 - - 0.845 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
15. rcor2 ENSDARG00000008278 1678 2.372 - - - - - 0.742 - 0.770 0.860 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
16. prpf40a ENSDARG00000058467 6565 2.364 - - - 0.920 - 0.738 - 0.706 - PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
17. gap43 ENSDARG00000099744 4114 2.357 - - - 0.903 - 0.737 - 0.717 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
18. hes6 ENSDARG00000019335 4754 2.353 0.713 - - - - 0.726 - - 0.914 hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
19. akirin2 ENSDARG00000058729 13245 2.314 - - 0.714 - - 0.779 - 0.821 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
20. ilf3b ENSDARG00000105177 9473 2.286 - - 0.706 - - - - 0.823 0.757 interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
21. ubr5 ENSDARG00000018192 9267 2.284 - - - - 0.842 0.701 - 0.741 - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
22. hp1bp3 ENSDARG00000044669 23708 2.273 - - 0.706 - 0.812 0.755 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
23. pcna ENSDARG00000054155 89521 2.21 - - 0.724 - - 0.726 - 0.760 - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
24. elmo1 ENSDARG00000098753 6966 1.8 - - - - - - 0.952 - 0.848 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
25. rerea ENSDARG00000077353 4162 1.75 - - - 0.926 - 0.824 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
26. seta ENSDARG00000031495 39977 1.747 - - - - 0.887 0.860 - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
27. hnrnpk ENSDARG00000018914 8841 1.728 - - - - 0.859 - - - 0.869 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
28. snrnp27 ENSDARG00000035625 9080 1.724 - - - - 0.773 - 0.951 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
29. sub1a ENSDARG00000053446 13383 1.704 - 0.761 - - - - 0.943 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
30. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.701 - - - 0.932 - - 0.769 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
31. TNRC6C_1 TNRC6C_1 6574 1.697 - - - - - 0.744 0.953 - -
32. fubp1 ENSDARG00000029248 15259 1.696 - - - - - - 0.950 0.746 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
33. mapre1b ENSDARG00000002659 9119 1.691 - - - - - - 0.954 0.737 - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
34. arf6b ENSDARG00000052928 4585 1.689 - - - - 0.736 - 0.953 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
35. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.686 - - - - - - - 0.788 0.898 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
36. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.682 - - - - - - 0.953 - 0.729 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
37. sf1 ENSDARG00000008188 5142 1.681 - - - - 0.825 0.856 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
38. smc1al ENSDARG00000058203 8838 1.67 - - - 0.941 - 0.729 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
39. blcap ENSDARG00000052073 8646 1.669 - - - 0.911 - 0.758 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
40. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.668 - - - - - 0.705 0.963 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
41. hnrnpm ENSDARG00000061735 19428 1.667 - - - - - - 0.967 0.700 - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
42. zbtb18 ENSDARG00000028228 3653 1.664 - - - - - 0.709 0.955 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
43. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.66 - - - 0.908 - 0.752 - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
44. tox ENSDARG00000032317 9126 1.66 - - - 0.949 - 0.711 - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
45. ppa1b ENSDARG00000030441 9027 1.659 - - - - - - 0.950 - 0.709 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
46. tra2a ENSDARG00000007863 4449 1.656 - - - - 0.801 0.855 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
47. meis1 meis1 6937 1.652 0.702 - - - - - 0.950 - -
48. khsrp ENSDARG00000026489 15738 1.651 - - 0.783 - - 0.868 - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
49. si:rp71-45k5.4 ENSDARG00000035679 10411 1.649 - - - - - 0.704 0.945 - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
50. IM:7163548 IM:7163548 6540 1.642 - - - - 0.817 0.825 - - -
51. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.638 0.833 - - - - - - 0.805 -
52. magi1b ENSDARG00000003169 2056 1.634 - - - - - 0.836 - - 0.798 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
53. cul4b ENSDARG00000060510 6053 1.63 - - - 0.926 - 0.704 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
54. zgc:112425 zgc:112425 293873 1.628 - - - - - 0.763 - 0.865 -
55. h3f3a 66671 1.616 0.767 - - - - - - 0.849 - H3 histone, family 3A, transcript variant X1
56. ccnd1 ENSDARG00000101637 34762 1.608 - 0.832 - 0.776 - - - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
57. MAP4K4 ENSDARG00000098670 4665 1.607 - - - - 0.850 0.757 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
58. mab21l1 ENSDARG00000102047 4665 1.607 - - - - 0.783 - - 0.824 - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
59. chd4b ENSDARG00000025789 14299 1.602 - - - 0.831 0.771 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
60. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.598 - - - - - - - 0.816 0.782
61. sncb ENSDARG00000104945 8197 1.593 - - - - - - - 0.757 0.836 synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
62. id2a ENSDARG00000055283 7428 1.592 - 0.779 - - - 0.813 - - - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
63. snrpe ENSDARG00000033175 7462 1.589 - - - - - 0.764 - - 0.825 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
64. hdac1 ENSDARG00000015427 19804 1.583 0.715 - - - - 0.868 - - - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
65. prmt1 ENSDARG00000010246 11311 1.579 - - - - - - - 0.700 0.879 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
66. pbx4 ENSDARG00000052150 35676 1.576 0.761 - - - - - - 0.815 - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
67. eif4a3 ENSDARG00000102978 16162 1.573 - - - - 0.796 0.777 - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
68. KANSL1_1 KANSL1_1 1809 1.57 - - - - - 0.764 - - 0.806
69. anp32a ENSDARG00000006487 28249 1.565 0.814 - 0.751 - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
70. ptmab ENSDARG00000101766 182812 1.565 0.738 - - - - - - 0.827 - prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
71. sumo3a ENSDARG00000028119 13447 1.563 - - - - - 0.821 - 0.742 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
72. si:dkey-42i9.4 ENSDARG00000008049 4752 1.562 - - - - 0.841 - - 0.721 - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
73. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.558 - - - - - 0.782 - 0.776 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
74. smarce1 ENSDARG00000016871 9628 1.548 - - - - - 0.767 - 0.781 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
75. nucks1a ENSDARG00000078473 28285 1.546 - - - - - 0.774 - 0.772 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
76. wasf3 wasf3 3287 1.545 - - - - - 0.736 - - 0.809
77. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.544 - - 0.783 - 0.761 - - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
78. cpsf3 ENSDARG00000027649 6897 1.543 - - - - - 0.723 - - 0.820 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
79. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.543 - - - - 0.824 0.719 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
80. psmd14 ENSDARG00000063100 15711 1.535 - - - - - 0.752 - - 0.783 proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
81. id4 ENSDARG00000045131 2916 1.533 - - - - - 0.769 - 0.764 - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
82. fscn1a ENSDARG00000059680 3999 1.533 - - - - - 0.750 - 0.783 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
83. tubb4b ENSDARG00000002344 30333 1.53 0.763 - - - - - - 0.767 - tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
84. ssbp3b ENSDARG00000030155 7163 1.528 - - - - 0.771 0.757 - - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
85. ubap2 ubap2 4167 1.527 - - - - - 0.769 - 0.758 -
86. ptenb ENSDARG00000056623 5783 1.526 - - - - - 0.753 - - 0.773 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
87. si:ch211-22i13.2 ENSDARG00000043485 4719 1.525 - - - - - - - 0.719 0.806 si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
88. CT955967.1 ENSDARG00000099956 2885 1.517 - - - - 0.766 - - 0.751 -
89. hug 4100 1.512 0.724 - - - - 0.788 - - - HuG, transcript variant X2
90. notch3 ENSDARG00000052139 15033 1.511 0.786 - - - - 0.725 - - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
91. elof1 ENSDARG00000099453 6176 1.51 0.709 - - - - 0.801 - - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
92. hnrnpub ENSDARG00000004735 16496 1.509 0.764 - - - - 0.745 - - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
93. tceb1b 14935 1.507 - - - 0.798 0.709 - - - - transcription elongation factor B (SIII), polypeptide 1b
94. tma7 ENSDARG00000071670 13372 1.507 - - - - - 0.732 - 0.775 - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
95. clasp1a ENSDARG00000010280 1158 1.505 - - - - 0.741 0.764 - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
96. ckap5 ENSDARG00000102674 5068 1.504 - - - - 0.790 0.714 - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
97. igf2bp1 ENSDARG00000061478 22924 1.501 - - - - 0.769 - - - 0.732 insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
98. zgc:123194 zgc:123194 69174 1.5 0.735 - - - - - - 0.765 -
99. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 1.495 - - - - 0.758 - - 0.737 - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
100. marcksb ENSDARG00000008803 42949 1.49 - - - - - 0.701 - - 0.789 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]

There are 945 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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