Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbm4.2

Gene Name Gene ID Reads Annotation
rbm4.2 ENSDARG00000055080 5241 RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]










Genes with expression patterns similar to rbm4.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm4.2 ENSDARG00000055080 5241 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
2. QPCT ENSDARG00000089717 1383 2.733 0.841 - - - - 0.982 0.910 - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
3. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 2.721 - - - - 0.877 - 0.942 0.902 - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
4. srsf11 ENSDARG00000098574 12801 2.714 0.898 - - - - 0.983 - - 0.833 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
5. cyb5r3 ENSDARG00000005891 4440 2.649 0.858 - - - - 0.876 0.915 - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
6. rbm8a ENSDARG00000016516 8789 2.616 0.896 - - - 0.857 - - 0.863 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
7. sdr16c5a ENSDARG00000016233 2413 2.612 0.915 0.721 - - - 0.976 - - - short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
8. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.499 0.903 - - 0.701 - - - 0.895 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
9. igf2bp3 ENSDARG00000010266 5789 2.464 - - - - 0.896 - - 0.788 0.780 insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
10. SRGAP3 ENSDARG00000060309 5353 2.444 - - 0.731 - 0.904 - 0.809 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
11. znf865 ENSDARG00000036698 15532 2.435 - - - 0.705 0.908 - - - 0.822 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
12. eif5b ENSDARG00000016548 3972 2.373 - - 0.716 - 0.895 - - - 0.762 eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
13. MAP4K4 ENSDARG00000098670 4665 2.363 - - 0.707 0.745 - - 0.911 - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
14. SMAD4 SMAD4 3233 2.291 - - - 0.710 - - - 0.737 0.844
15. smarcd1 ENSDARG00000019004 6028 2.139 - 0.714 - 0.714 - - - - 0.711 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
16. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 1.954 - - - - - 0.977 0.977 - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
17. crb3b ENSDARG00000068182 683 1.946 - - - - - 0.985 0.961 - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
18. egfra ENSDARG00000013847 2912 1.943 0.958 - - - - 0.985 - - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
19. tomm7 ENSDARG00000067717 4452 1.938 - - - - - 0.980 0.958 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
20. map1lc3b ENSDARG00000101127 3958 1.931 0.950 - - - - 0.981 - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
21. tex2 ENSDARG00000078186 2467 1.928 - - - - - 0.985 0.943 - - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
22. CDCA4 ENSDARG00000042319 7918 1.908 - - - - - - 0.969 0.939 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
23. gclc ENSDARG00000013095 2146 1.906 - - - - 0.912 0.994 - - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
24. cplx4b ENSDARG00000059486 3192 1.899 0.919 - - - - - 0.980 - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
25. elmo1 ENSDARG00000098753 6966 1.897 - - - - - 0.983 - 0.914 - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
26. slc16a12b ENSDARG00000089885 3744 1.895 0.913 - - - - 0.982 - - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
27. pfdn1 ENSDARG00000014536 6969 1.89 - - - - - 0.974 0.916 - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
28. clint1a ENSDARG00000025535 4965 1.886 0.895 - - - - 0.991 - - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
29. nlk1 ENSDARG00000006566 1123 1.884 - - - - - - 0.960 0.924 - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
30. b2ml ENSDARG00000015887 1060 1.881 - - - - - - 0.973 0.908 - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
31. cd99 ENSDARG00000051975 3824 1.88 - - - - 0.893 0.987 - - - CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]
32. zgc:77439 ENSDARG00000039211 1492 1.871 - - - - - 0.976 0.895 - - zgc:77439 [Source:ZFIN;Acc:ZDB-GENE-031010-24]
33. arrb2b ENSDARG00000011545 3126 1.869 - - - - - - 0.938 0.931 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
34. med14 ENSDARG00000009953 1383 1.868 - - - - 0.898 - 0.970 - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
35. lsm4 ENSDARG00000023852 6083 1.867 0.898 - - - - - 0.969 - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
36. agpat4 ENSDARG00000069044 4487 1.863 0.974 - - - - - - 0.889 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
37. chpt1 ENSDARG00000014572 2926 1.858 0.888 - - - - 0.970 - - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
38. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.85 0.951 - - - - - 0.899 - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
39. CPEB4 CPEB4 3249 1.849 - - - - - 0.981 - 0.868 -
40. C2H6orf52 C2H6orf52 2847 1.848 - - - - - - 0.966 0.882 -
41. CU633999.1 ENSDARG00000098197 2880 1.844 - - - - 0.871 - 0.973 - -
42. tet2 ENSDARG00000076928 2190 1.843 0.965 - - - - - - 0.878 - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
43. brms1la ENSDARG00000006235 2011 1.84 - - - - 0.910 - - 0.930 - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
44. cul3a ENSDARG00000038967 6155 1.838 - - - - - 0.989 - 0.849 - cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
45. nefma ENSDARG00000021351 790 1.834 - - - - 0.871 - 0.963 - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
46. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.834 - - - - - - 0.916 0.918 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
47. cox14 ENSDARG00000092124 2229 1.832 0.962 - - - - - - 0.870 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
48. casc4 ENSDARG00000074490 2019 1.829 - - - - - - 0.973 0.856 - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
49. farsa ENSDARG00000098825 2813 1.826 0.943 - - - - - - 0.883 - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
50. loxl2b ENSDARG00000044074 1919 1.825 - - - - 0.865 - 0.960 - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
51. ralbp1 ENSDARG00000078653 2440 1.814 - - - - - - 0.973 0.841 - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
52. dhx15 ENSDARG00000015392 7496 1.814 - - - - - - 0.961 - 0.853 DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
53. dpp9 ENSDARG00000052606 2279 1.813 - - - - 0.866 - 0.947 - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
54. setbp1 ENSDARG00000093799 4499 1.811 - - - - - - 0.974 0.837 - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
55. rab10 ENSDARG00000046106 15618 1.806 - - - - 0.921 - 0.885 - - RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
56. eif4ebp3l ENSDARG00000041607 5257 1.804 - - - - - 0.975 0.829 - - eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
57. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.802 0.958 0.844 - - - - - - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
58. gpt2l ENSDARG00000019541 3397 1.802 0.959 0.843 - - - - - - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
59. tubb5 ENSDARG00000037997 18691 1.792 - - - - - 0.893 - 0.899 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
60. dars ENSDARG00000070043 6854 1.781 - - - - 0.810 0.971 - - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
61. fam3c ENSDARG00000056152 3833 1.779 - - - - - - 0.964 0.815 - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
62. tp53inp1 ENSDARG00000028017 2184 1.769 - - - - - 0.985 - - 0.784 tumor protein p53 inducible nuclear protein 1 [Source:ZFIN;Acc:ZDB-GENE-031018-3]
63. cp ENSDARG00000010312 1245 1.762 0.960 0.802 - - - - - - - ceruloplasmin [Source:ZFIN;Acc:ZDB-GENE-010522-1]
64. rrm1 ENSDARG00000014017 7296 1.761 - - - - - 0.992 - 0.769 - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
65. atp6v1d ENSDARG00000011175 8331 1.761 - - - - - - 0.843 0.918 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
66. cenpe ENSDARG00000063385 4428 1.76 0.855 - - - 0.905 - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
67. ube2i ube2i 13024 1.758 0.874 - - - - - - 0.884 -
68. pias4a ENSDARG00000007081 4264 1.752 - - - - 0.904 - - - 0.848 protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
69. HNRNPA2B1 HNRNPA2B1 14997 1.75 - - - 0.782 - 0.968 - - -
70. prdm16 prdm16 1346 1.747 - - - - 0.877 - - 0.870 -
71. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 1.745 - - - - - 0.998 - - 0.747 ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
72. wu:fc51f04 wu:fc51f04 7074 1.736 0.871 - - - 0.865 - - - -
73. zgc:110239 ENSDARG00000077664 7015 1.735 - - - - 0.873 0.862 - - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
74. cdc42bpb ENSDARG00000019383 5976 1.73 - - - - 0.843 - 0.887 - - CDC42 binding protein kinase beta (DMPK-like) [Source:ZFIN;Acc:ZDB-GENE-030131-3647]
75. tjp1a ENSDARG00000077506 2658 1.728 - - - - - 0.982 - - 0.746 tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
76. CR387996.1 ENSDARG00000097774 3037 1.725 - - - - - - - 0.923 0.802
77. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.723 - - - - 0.819 - - 0.904 - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
78. gnb4b ENSDARG00000115383 7457 1.721 - - - - - 0.990 - - 0.731 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
79. snrpb ENSDARG00000011125 11729 1.72 0.800 - - - - - - 0.920 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
80. kif22 ENSDARG00000102624 3694 1.715 - - - - 0.872 - - 0.843 - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
81. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.711 - - - - 0.895 - - - 0.816 heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
82. nuf2 ENSDARG00000034624 2252 1.703 - - - - 0.909 - - - 0.794 NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
83. pgrmc1 ENSDARG00000054172 5423 1.7 0.966 0.734 - - - - - - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
84. ddi2 ENSDARG00000006477 4190 1.696 - 0.781 - - 0.915 - - - - DNA-damage inducible protein 2 [Source:ZFIN;Acc:ZDB-GENE-031030-15]
85. atf4b2 atf4b2 4734 1.695 - - - - - - - 0.919 0.776
86. cry2a cry2a 2728 1.692 - - - - - 0.983 - - 0.709
87. epn2 ENSDARG00000008377 5458 1.69 0.978 - - - - - - - 0.712 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
88. lrrc40 ENSDARG00000017708 1156 1.69 0.905 - - - 0.785 - - - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
89. zgc:65772 zgc:65772 2092 1.682 - - - - - - - 0.923 0.759
90. smad3a ENSDARG00000036096, ENSDARG00000117146 2668 1.681 - - - - - - - 0.869 0.812 SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]
91. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 1.68 - 0.731 - - - 0.949 - - - succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
92. kmt2bb ENSDARG00000060697 5230 1.678 - - 0.704 - - - 0.974 - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
93. minos1 ENSDARG00000101619 5273 1.675 - - - - - 0.973 - 0.702 - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
94. hmgb3a ENSDARG00000056725 15668 1.674 - - - - - - - 0.907 0.767 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
95. perp ENSDARG00000063572 6423 1.671 - - - - - 0.965 - 0.706 - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
96. gstp1 ENSDARG00000104068 12698 1.671 0.814 - - - - - 0.857 - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
97. nup50 ENSDARG00000017454 4425 1.667 - - 0.747 - 0.920 - - - - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
98. h1fx ENSDARG00000054058 4075 1.663 - 0.777 - - 0.886 - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
99. cnbpa ENSDARG00000045776 8648 1.66 - - - - - - 0.926 - 0.734 CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
100. ptp4a1 ENSDARG00000006242 10267 1.66 - - - - - 0.949 - - 0.711 protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]

There are 1440 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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