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Results for rbm39b

Gene Name Gene ID Reads Annotation
rbm39b ENSDARG00000041853 1421 RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]










Genes with expression patterns similar to rbm39b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm39b ENSDARG00000041853 1421 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
2. rtf1 ENSDARG00000008947 6596 2.612 - - 0.848 - 0.905 0.859 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
3. PCBP4 ENSDARG00000024276 3194 2.527 - - 0.984 - 0.751 - - 0.792 - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
4. dut ENSDARG00000106529 3120 2.413 - 0.753 0.913 - 0.747 - - - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
5. cwf19l2 ENSDARG00000091760 1372 2.359 - 0.737 - - 0.866 0.756 - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
6. mgaa ENSDARG00000078784 1344 1.889 - - 0.983 - 0.906 - - - - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
7. GTSE1 ENSDARG00000013719 1115 1.882 - - 0.984 - 0.898 - - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
8. ahi1 ENSDARG00000044056 951 1.876 - - 0.976 - - - - 0.900 - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
9. ttc3 ENSDARG00000086075 2157 1.874 - - 0.978 - 0.896 - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
10. ddx27 ENSDARG00000091831 1471 1.855 - - 0.972 - 0.883 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
11. TUBGCP6 1991 1.845 - - 0.981 - 0.864 - - - - tubulin, gamma complex associated protein 6
12. tfap4 ENSDARG00000103923 2203 1.843 - - 0.967 - 0.876 - - - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
13. lin54 ENSDARG00000063194 2583 1.842 - - 0.981 - - - - 0.861 - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
14. CABZ01087568.1 CABZ01087568.1 1487 1.836 - - 0.991 - 0.845 - - - -
15. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 1.804 - - 0.978 - - - - 0.826 - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
16. ubl3b ENSDARG00000021556 1210 1.796 - - 0.990 - - - - 0.806 - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
17. utp23 ENSDARG00000105012 1346 1.792 - - - - 0.909 - - 0.883 - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
18. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.784 - - - - 0.885 - - 0.899 - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
19. pou3f3a ENSDARG00000042032 2835 1.784 - - 0.929 - - - - 0.855 - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
20. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 1.775 - - - - 0.909 - - 0.866 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
21. ppp2r5eb ENSDARG00000069118 1902 1.766 - - 0.982 - - - - 0.784 - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
22. ctsf ENSDARG00000063095 4564 1.764 - - 0.937 - 0.827 - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
23. mycla ENSDARG00000006003 1866 1.763 - - - - 0.895 - - 0.868 - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
24. tnfaip3 ENSDARG00000027777 1066 1.763 - - 0.989 - - - 0.774 - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
25. PKN2 ENSDARG00000101293 358 1.756 - 0.766 0.990 - - - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
26. slc2a8 ENSDARG00000104278 764 1.754 - - - - 0.869 - - 0.885 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
27. kdm5c ENSDARG00000006124 4389 1.754 - - 0.857 - 0.897 - - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
28. mark2b ENSDARG00000032458 821 1.751 - - - - 0.893 - - 0.858 - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
29. xpo1b ENSDARG00000063229 2529 1.75 - - 0.970 - 0.780 - - - - exportin 1 (CRM1 homolog, yeast) b [Source:ZFIN;Acc:ZDB-GENE-070530-6]
30. zgc:113348 ENSDARG00000103795 1351 1.738 - - 0.989 - - - 0.749 - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
31. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.737 - - 0.974 - - - - 0.763 - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
32. ptpn1 ENSDARG00000007923 3647 1.731 - - 0.983 - - 0.748 - - - protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
33. BX323045.3 BX323045.3 1044 1.727 - - 0.988 - - - 0.739 - -
34. eng1a eng1a 484 1.716 - - - - 0.858 - - 0.858 -
35. reep5 ENSDARG00000100742 1470 1.712 - - 0.979 - - - 0.733 - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
36. chst13 chst13 669 1.71 - - 0.965 - - - 0.745 - -
37. dctd ENSDARG00000036990 2168 1.706 - - - - 0.852 - - 0.854 - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
38. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.705 - - 0.950 - 0.755 - - - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
39. sult6b1 ENSDARG00000086826 2070 1.704 - - - - 0.891 - - 0.813 - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
40. MSL1_1 MSL1_1 2365 1.699 - - 0.962 - 0.737 - - - -
41. prkcda ENSDARG00000009208 1508 1.696 - 0.721 0.975 - - - - - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
42. wtip ENSDARG00000103607 797 1.696 - - 0.986 - - - 0.710 - - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
43. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.694 - 0.760 0.934 - - - - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
44. ndc80 ENSDARG00000071694 1162 1.694 - - 0.971 - - - 0.723 - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
45. srrm2 ENSDARG00000037965 1967 1.69 - 0.733 0.957 - - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
46. sdc4 ENSDARG00000059906 10105 1.684 - 0.797 0.887 - - - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
47. sema6a ENSDARG00000102165 1401 1.682 - 0.707 0.975 - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
48. EEF1E1 ENSDARG00000071774 3806 1.673 - 0.709 0.964 - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
49. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.668 - - - - 0.871 0.797 - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
50. rspry1 ENSDARG00000062558 1424 1.665 - - - - 0.854 - - 0.811 - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
51. smg5 ENSDARG00000041481 1286 1.649 - - - - 0.867 0.782 - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
52. nudt2 ENSDARG00000058728 371 1.646 - - - - 0.872 - 0.774 - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
53. PEG3_38 PEG3_38 521 1.644 - - - - 0.904 0.740 - - -
54. nfs1 ENSDARG00000062237 2741 1.638 - - - - 0.869 - 0.769 - - NFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
55. phf16 phf16 1116 1.638 - - - - - 0.756 - 0.882 -
56. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.637 - - - - 0.867 - - 0.770 - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
57. fmnl3 ENSDARG00000004372 821 1.636 - - - - 0.896 - 0.740 - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
58. amer2 ENSDARG00000075222 594 1.634 - - - - 0.906 - 0.728 - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
59. rnf10 ENSDARG00000079687 6768 1.633 - - 0.916 - - 0.717 - - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
60. mapk3 ENSDARG00000070573 6842 1.619 - 0.784 - - 0.835 - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
61. wbscr16 wbscr16 791 1.615 - - - - 0.880 - 0.735 - -
62. FAM126B 588 1.613 - - - - - - 0.741 0.872 - family with sequence similarity 126 member B
63. lrp12 ENSDARG00000098845 999 1.61 - - - - 0.889 0.721 - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
64. CABZ01003022.1 CABZ01003022.1 507 1.6 - - - - - - 0.712 0.888 -
65. ZNF337_25 ZNF337_25 1713 1.593 - 0.743 - - 0.850 - - - -
66. si:dkey-226l10.6 ENSDARG00000087483 1651 1.588 - - - - 0.841 - - 0.747 - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
67. si:dkey-11f4.16 ENSDARG00000099799 121 1.588 - - - - - 0.722 - 0.866 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
68. wdr59 ENSDARG00000088817 1005 1.584 - 0.724 - - 0.860 - - - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
69. ppp2r2d ENSDARG00000102009 5710 1.582 - - 0.846 - - 0.736 - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
70. hey2 ENSDARG00000013441 540 1.578 - - - - - - 0.703 0.875 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
71. PLEKHG1 2100 1.575 - - 0.750 - 0.825 - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
72. mlec ENSDARG00000059630 2057 1.572 - 0.805 - - 0.767 - - - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
73. dbnla ENSDARG00000008170 2129 1.569 - - - - 0.796 - - 0.773 - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
74. tmem223 ENSDARG00000069494 1528 1.568 - - - - - - 0.705 0.863 - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
75. arhgef4 ENSDARG00000012914 1464 1.562 - - - - - 0.748 - 0.814 - Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
76. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.556 - 0.798 - - 0.758 - - - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
77. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.55 - 0.725 - - - - - 0.825 - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
78. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.548 - 0.720 - - - 0.828 - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
79. cand1 ENSDARG00000017841 8164 1.544 - 0.714 0.830 - - - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
80. ube2nb ENSDARG00000045877 4583 1.543 - 0.760 - - 0.783 - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
81. zgc:65772 zgc:65772 2092 1.541 - - - - 0.820 0.721 - - -
82. mtss1l mtss1l 2494 1.539 - 0.714 - - 0.825 - - - -
83. wdr3 ENSDARG00000011079 1403 1.537 - - - - 0.820 - 0.717 - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
84. mrpl40 ENSDARG00000043554 2198 1.533 - 0.702 - - 0.831 - - - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
85. strn3 ENSDARG00000001729 4608 1.53 - - - - 0.790 - - 0.740 - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
86. SHPRH ENSDARG00000075884 382 1.53 - - - 0.703 - - - 0.827 - SNF2 histone linker PHD RING helicase [Source:ZFIN;Acc:ZDB-GENE-110512-2]
87. slc25a12 ENSDARG00000102362 2773 1.527 - 0.737 - - - - - 0.790 - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
88. TTYH3 TTYH3 1841 1.523 - 0.713 - - 0.810 - - - -
89. cdc42 ENSDARG00000044573 11795 1.516 0.712 - 0.804 - - - - - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
90. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.506 - - - - 0.781 - - 0.725 - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
91. CDC42EP1_1 CDC42EP1_1 449 1.499 - - - - - 0.735 - 0.764 -
92. eif4e3 ENSDARG00000005078 1624 1.486 - 0.729 - - - 0.757 - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
93. nans nans 1365 1.484 - - - - - 0.739 0.745 - -
94. lrrc17 ENSDARG00000037960 1585 1.483 - 0.780 - - - 0.703 - - - leucine rich repeat containing 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9774]
95. tprb ENSDARG00000016630 274 1.483 0.703 - - - - - 0.780 - - translocated promoter region b, nuclear basket protein [Source:ZFIN;Acc:ZDB-GENE-030131-6410]
96. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.482 - - - - - - 0.750 0.732 - StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
97. ECI2 ENSDARG00000102412 848 1.481 - - - - - - 0.717 0.764 - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
98. eif3ba ENSDARG00000059654 22960 1.474 - - 0.773 - - 0.701 - - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
99. pip5k1ab ENSDARG00000024642 1988 1.465 - 0.715 - - - - - 0.750 - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
100. prpf3 ENSDARG00000086425, ENSDARG00000116776 513 1.465 - 0.701 - - - - 0.764 - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]

There are 1425 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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