Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbm27

Gene Name Gene ID Reads Annotation
rbm27 ENSDARG00000060521 185 RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]










Genes with expression patterns similar to rbm27

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm27 ENSDARG00000060521 185 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
2. irf1b ENSDARG00000043249 30 1.725 0.734 - - - - 0.991 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
3. LPHN3 LPHN3 195 1.717 - - - - - - 0.761 0.956 -
4. C5H2orf42 C5H2orf42 65 1.704 0.809 - - - - 0.895 - - -
5. irak1 ENSDARG00000025949 19 1.691 0.700 - - - - 0.991 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
6. ripk4 ENSDARG00000043211 775 1.677 - 0.726 - - - - - 0.951 - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
7. znf277 ENSDARG00000025346, ENSDARG00000113592 288 1.668 - - 0.718 - - - - 0.950 - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
8. cdh10 cdh10 38 1.667 0.734 - - - - 0.933 - - -
9. CABZ01079251.1 ENSDARG00000100498 38 1.661 - - 0.798 - - 0.863 - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
10. CABZ01088061.1 CABZ01088061.1 695 1.652 - 0.710 - - - - - 0.942 -
11. spata2l ENSDARG00000068814 152 1.651 - - - - - - 0.700 0.951 - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
12. CU459160.1 CU459160.1 104 1.645 - 0.753 - - - - - 0.892 -
13. EPS8 78 1.641 - 0.729 - - - 0.912 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
14. med30 ENSDARG00000101115 133 1.629 - - 0.824 - - 0.805 - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
15. usp40 ENSDARG00000071197 825 1.589 - 0.703 - - - - - 0.886 - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
16. ppp1r11 ENSDARG00000036063 587 1.582 - - 0.734 - - 0.848 - - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
17. nfxl1 ENSDARG00000070127 392 1.558 - 0.789 - - - - - 0.769 - nuclear transcription factor, X-box binding-like 1 [Source:ZFIN;Acc:ZDB-GENE-110411-178]
18. CU302436.1_1 ENSDARG00000114500 18 1.547 0.734 - - - - 0.813 - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
19. psmc3ip ENSDARG00000037892 214 1.522 - - 0.783 - - 0.739 - - - PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]
20. NUP54 ENSDARG00000103296 433 1.519 - - 0.741 - - - - 0.778 - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
21. cox11 ENSDARG00000061004, ENSDARG00000115002 423 1.491 - - - - - 0.749 0.742 - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
22. cyp46a2 cyp46a2 38 1.489 0.734 - - - - 0.755 - - -
23. chfr ENSDARG00000075347 664 1.486 - - 0.780 - - - - 0.706 - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
24. sh3bp5a ENSDARG00000100529 642 1.469 0.760 0.709 - - - - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
25. WIZ WIZ 1188 1.451 - - 0.730 - - 0.721 - - -
26. hspb7 ENSDARG00000104441 1417 1.448 0.731 - - - - - - 0.717 - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
27. ROCK2_3 ROCK2_3 12 0.998 - - - - - 0.998 - - -
28. EVA1B EVA1B 22 0.998 - - - - - 0.998 - - -
29. CU855890.3 CU855890.3 307 0.993 - - - - - 0.993 - - -
30. trpm5 ENSDARG00000059792 3 0.991 - - - - - 0.991 - - - transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
31. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 0.991 - - - - - 0.991 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
32. NINJ1 ENSDARG00000103663 43 0.991 - - - - - 0.991 - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
33. fam166b ENSDARG00000100292 14 0.991 - - - - - 0.991 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
34. si:dkey-119g10.4 si:dkey-119g10.4 7 0.991 - - - - - 0.991 - - -
35. or115-12 ENSDARG00000044748 2 0.991 - - - - - 0.991 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
36. sox11a ENSDARG00000077811 25 0.991 - - - - - 0.991 - - - SRY (sex determining region Y)-box 11a [Source:ZFIN;Acc:ZDB-GENE-980526-395]
37. CABZ01084273.1 CABZ01084273.1 16 0.991 - - - - - 0.991 - - -
38. CR356223.1 ENSDARG00000093865 1 0.991 - - - - - 0.991 - - -
39. C1QTNF6 C1QTNF6 2 0.991 - - - - - 0.991 - - -
40. OTOS ENSDARG00000108475 180 0.991 - - - - - 0.991 - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
41. dok1a ENSDARG00000078108 9 0.991 - - - - - 0.991 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
42. FNDC3A ENSDARG00000105503 11 0.991 - - - - - 0.991 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
43. BX323854.4 BX323854.4 3 0.991 - - - - - 0.991 - - -
44. foxi1 ENSDARG00000104566 176 0.991 - - - - - 0.991 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
45. TSPAN1 ENSDARG00000052027 4 0.991 - - - - - 0.991 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
46. ZC2HC1C ENSDARG00000070526 14 0.991 - - - - - 0.991 - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
47. itga2.1 ENSDARG00000069390 6 0.991 - - - - - 0.991 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
48. thbs4a ENSDARG00000102777 625 0.991 - - - - - 0.991 - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
49. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 0.991 - - - - - 0.991 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
50. syt15 ENSDARG00000079926 8 0.991 - - - - - 0.991 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
51. GMEB2 ENSDARG00000093240 6 0.991 - - - - - 0.991 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
52. BX004880.2 BX004880.2 83 0.991 - - - - - 0.991 - - -
53. si:ch211-117l17.4 ENSDARG00000103534 24 0.991 - - - - - 0.991 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
54. kcnh3 ENSDARG00000069560 4 0.991 - - - - - 0.991 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
55. il12bb ENSDARG00000054542 6 0.991 - - - - - 0.991 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
56. CT573356.3 CT573356.3 2 0.991 - - - - - 0.991 - - -
57. si:dkey-112e17.1 ENSDARG00000093201 1 0.991 - - - - - 0.991 - - - si:dkey-112e17.1 [Source:ZFIN;Acc:ZDB-GENE-060526-193]
58. cldn10l2 ENSDARG00000105042 11 0.991 - - - - - 0.991 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
59. snR50 snR50 1 0.991 - - - - - 0.991 - - -
60. olfcg2 ENSDARG00000101083 8 0.991 - - - - - 0.991 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
61. uts1 ENSDARG00000014927 35 0.991 - - - - - 0.991 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
62. tbl2 ENSDARG00000043357 125 0.991 - - - - - 0.991 - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
63. ftr58 ENSDARG00000071238 10 0.991 - - - - - 0.991 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
64. PRTFDC1 ENSDARG00000011683 11 0.991 - - - - - 0.991 - - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
65. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 0.991 - - - - - 0.991 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
66. TMEM121_1 TMEM121_1 22 0.991 - - - - - 0.991 - - -
67. URB1 ENSDARG00000060308 78 0.991 - - - - - 0.991 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
68. CABZ01112210.1 CABZ01112210.1 48 0.991 - - - - - 0.991 - - -
69. oscp1a ENSDARG00000101222, ENSDARG00000104403 17 0.991 - - - - - 0.991 - - - organic solute carrier partner 1a [Source:ZFIN;Acc:ZDB-GENE-080204-2]
70. syt6a ENSDARG00000076730 4 0.991 - - - - - 0.991 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
71. rhobtb2b ENSDARG00000089340 4 0.991 - - - - - 0.991 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
72. ccdc14 ENSDARG00000098734 3 0.991 - - - - - 0.991 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
73. crybb1l2 ENSDARG00000016793 723 0.991 - - - - - 0.991 - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
74. ccdc41 ccdc41 97 0.991 - - - - - 0.991 - - -
75. si:ch211-219a15.3 ENSDARG00000087659 12 0.991 - - - - - 0.991 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
76. il17c ENSDARG00000057180, ENSDARG00000109701 3 0.991 - - - - - 0.991 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
77. si:ch211-125e6.12 ENSDARG00000092090 3 0.991 - - - - - 0.991 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
78. pdk3a ENSDARG00000014527 15 0.991 - - - - - 0.991 - - - pyruvate dehydrogenase kinase, isozyme 3a [Source:ZFIN;Acc:ZDB-GENE-061220-3]
79. pigf ENSDARG00000032780 7 0.991 - - - - - 0.991 - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
80. CABZ01060813.1 CABZ01060813.1 12 0.991 - - - - - 0.991 - - -
81. vtg3 ENSDARG00000016448 8 0.991 - - - - - 0.991 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
82. C12H16orf93 C12H16orf93 1 0.991 - - - - - 0.991 - - -
83. TESPA1 ENSDARG00000053311 29 0.991 - - - - - 0.991 - - - thymocyte expressed, positive selection associated 1 [Source:ZFIN;Acc:ZDB-GENE-120727-10]
84. TGFBR2 TGFBR2 2 0.991 - - - - - 0.991 - - -
85. NOX4 3 0.991 - - - - - 0.991 - - - NADPH oxidase 4
86. FAM196A 82 0.991 - - - - - 0.991 - - - family with sequence similarity 196 member A
87. themis ENSDARG00000010619 5 0.991 - - - - - 0.991 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
88. slc25a19 ENSDARG00000100385 2 0.991 - - - - - 0.991 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
89. v2rh11 ENSDARG00000115088 1 0.991 - - - - - 0.991 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
90. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 0.991 - - - - - 0.991 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
91. m17 ENSDARG00000035435 28 0.991 - - - - - 0.991 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
92. CMA1_8 CMA1_8 10 0.991 - - - - - 0.991 - - -
93. CELA1_2 CELA1_2 2 0.991 - - - - - 0.991 - - -
94. HMGXB3 ENSDARG00000077823 2 0.991 - - - - - 0.991 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
95. ripply2 ENSDARG00000070535 18 0.991 - - - - - 0.991 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
96. NAT14 ENSDARG00000115349 21 0.991 - - - - - 0.991 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
97. BICD1 BICD1 9 0.991 - - - - - 0.991 - - -
98. NMI 3 0.991 - - - - - 0.991 - - - N-myc (and STAT) interactor
99. BX284672.1 BX284672.1 11 0.991 - - - - - 0.991 - - -
100. gp1bb ENSDARG00000074441 116 0.991 - - - - - 0.991 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]

There are 991 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA