Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbm18

Gene Name Gene ID Reads Annotation
rbm18 ENSDARG00000044255, ENSDARG00000111311 589 RNA binding motif protein 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1764]










Genes with expression patterns similar to rbm18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm18 ENSDARG00000044255, ENSDARG00000111311 589 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1764]
2. sema3fa ENSDARG00000011163 759 1.617 0.870 - - - - - - 0.747 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
3. vti1b ENSDARG00000039270 295 1.572 0.756 0.816 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
4. zgc:92664 ENSDARG00000015161 1651 1.522 - 0.803 - - - 0.719 - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
5. rad54l2 ENSDARG00000063031 821 1.448 0.726 - - - - - - 0.722 - RAD54 like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3097]
6. uggt2 ENSDARG00000062089 661 1.439 - 0.733 - - - - - 0.706 - UDP-glucose glycoprotein glucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050517-21]
7. fryb ENSDARG00000056001, ENSDARG00000110169 307 1.426 0.722 0.704 - - - - - - - furry homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-080215-5]
8. b9d2 ENSDARG00000017385 424 1.412 - 0.701 - - - 0.711 - - - B9 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-90]
9. CCDC30 ENSDARG00000056961 178 0.966 0.966 - - - - - - - - coiled-coil domain containing 30 [Source:ZFIN;Acc:ZDB-GENE-130530-667]
10. myh14 ENSDARG00000073732 502 0.957 0.957 - - - - - - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
11. adamtsl7 ENSDARG00000055439 575 0.956 0.956 - - - - - - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
12. slc16a6a ENSDARG00000102793 60 0.956 0.956 - - - - - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
13. NAV1_1 NAV1_1 35 0.95 0.950 - - - - - - - -
14. si:dkey-242h9.3 ENSDARG00000069189 83 0.948 0.948 - - - - - - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
15. CABZ01073654.1 CABZ01073654.1 16 0.947 0.947 - - - - - - - -
16. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.945 0.945 - - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
17. cyb5r2 ENSDARG00000051925 304 0.942 0.942 - - - - - - - - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
18. si:ch211-15j21.2 si:ch211-15j21.2 13 0.941 0.941 - - - - - - - -
19. gnsa ENSDARG00000023766 545 0.94 0.940 - - - - - - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
20. si:ch211-67e16.11 ENSDARG00000095580 635 0.939 0.939 - - - - - - - - si:ch211-67e16.11 [Source:ZFIN;Acc:ZDB-GENE-030131-7044]
21. si:rp71-80o10.4 ENSDARG00000094316 279 0.937 0.937 - - - - - - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
22. DLEU7 DLEU7 91 0.935 0.935 - - - - - - - -
23. si:dkey-56e5.2 si:dkey-56e5.2 14 0.934 0.934 - - - - - - - -
24. si:dkey-27p18.3 ENSDARG00000092228 38 0.934 0.934 - - - - - - - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
25. PATL2 PATL2 10 0.934 0.934 - - - - - - - -
26. zgc:114037_3 17 0.934 0.934 - - - - - - - - zgc:114037
27. PPP1R16A ENSDARG00000076980 40 0.934 0.934 - - - - - - - - protein phosphatase 1, regulatory subunit 16A [Source:ZFIN;Acc:ZDB-GENE-121214-252]
28. si:dkey-4c15.13 ENSDARG00000095704 13 0.934 0.934 - - - - - - - - si:dkey-4c15.13 [Source:ZFIN;Acc:ZDB-GENE-030131-2023]
29. si:dkey-4c15.5 si:dkey-4c15.5 36 0.934 0.934 - - - - - - - -
30. OVOL1 75 0.934 0.934 - - - - - - - - ovo-like zinc finger 1, transcript variant X1
31. sstr3 ENSDARG00000014477 14 0.934 0.934 - - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
32. foxi1 ENSDARG00000104566 176 0.934 0.934 - - - - - - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
33. racgap1 ENSDARG00000015460 38 0.934 0.934 - - - - - - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
34. si:ch211-162i8.4 ENSDARG00000087168, ENSDARG00000094484 69 0.934 0.934 - - - - - - - - si:ch211-162i8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-48]
35. pag1 ENSDARG00000055875 21 0.934 0.934 - - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
36. si:dkey-176g1.6 si:dkey-176g1.6 5 0.934 0.934 - - - - - - - -
37. si:ch211-212i14.2 si:ch211-212i14.2 9 0.934 0.934 - - - - - - - -
38. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 0.934 0.934 - - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
39. CU019646.1 ENSDARG00000117632 223 0.934 0.934 - - - - - - - - uncharacterized LOC110439932 [Source:NCBI gene;Acc:110439932]
40. lin7b ENSDARG00000037932 150 0.932 0.932 - - - - - - - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
41. flt3 ENSDARG00000058503 32 0.932 0.932 - - - - - - - - fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4]
42. ldb2a ENSDARG00000019579 26 0.932 0.932 - - - - - - - - LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136]
43. si:ch211-241j12.3 ENSDARG00000043963 128 0.931 0.931 - - - - - - - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
44. lrrc31 ENSDARG00000057392 61 0.929 0.929 - - - - - - - - leucine rich repeat containing 31 [Source:ZFIN;Acc:ZDB-GENE-091204-286]
45. crp1 ENSDARG00000071454 31 0.929 0.929 - - - - - - - - C-reactive protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-314]
46. tmem144a ENSDARG00000037409, ENSDARG00000110998, ENSDARG00000112588, ENSDARG00000116960 64 0.929 0.929 - - - - - - - - transmembrane protein 144a [Source:ZFIN;Acc:ZDB-GENE-040822-12]
47. C7 C7 81 0.928 0.928 - - - - - - - -
48. CT573389.1 CT573389.1 26 0.928 0.928 - - - - - - - -
49. CABZ01060813.1 CABZ01060813.1 12 0.927 0.927 - - - - - - - -
50. LAMB3 LAMB3 31 0.927 0.927 - - - - - - - -
51. h2afy ENSDARG00000099329 286 0.927 0.927 - - - - - - - - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
52. ikbke ENSDARG00000070606, ENSDARG00000111682, ENSDARG00000111787 54 0.926 0.926 - - - - - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon [Source:ZFIN;Acc:ZDB-GENE-040718-251]
53. THSD7A THSD7A 69 0.924 0.924 - - - - - - - -
54. tbl2 ENSDARG00000043357 125 0.923 0.923 - - - - - - - - transducin (beta)-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9012]
55. grhl2a ENSDARG00000058342 153 0.922 0.922 - - - - - - - - grainyhead-like transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-050913-123]
56. akr7a3 ENSDARG00000016649 314 0.922 0.922 - - - - - - - - aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040718-62]
57. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 0.921 0.921 - - - - - - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
58. crlf1a ENSDARG00000024365 222 0.92 0.920 - - - - - - - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]
59. plod3 ENSDARG00000076317 46 0.915 0.915 - - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-021031-4]
60. C13H4orf32 C13H4orf32 174 0.914 0.914 - - - - - - - -
61. CPNE8_1 CPNE8_1 140 0.913 0.913 - - - - - - - -
62. si:dkey-250k15.4 ENSDARG00000092169 19 0.912 0.912 - - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
63. LENG9 ENSDARG00000062374, ENSDARG00000111560 182 0.912 0.912 - - - - - - - - leukocyte receptor cluster (LRC) member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-607]
64. LPL_1 LPL_1 1150 0.91 0.910 - - - - - - - -
65. PGBD4_2 PGBD4_2 184 0.909 0.909 - - - - - - - -
66. C24H8orf44 C24H8orf44 405 0.905 0.905 - - - - - - - -
67. arpc5la ENSDARG00000041720 143 0.902 0.902 - - - - - - - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
68. si:ch211-117n7.8 si:ch211-117n7.8 83 0.902 0.902 - - - - - - - -
69. rwdd3 ENSDARG00000057315 289 0.902 0.902 - - - - - - - - RWD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1723]
70. gb:bc139653 gb:bc139653 239 0.901 0.901 - - - - - - - -
71. METTL15 ENSDARG00000089236 39 0.9 0.900 - - - - - - - - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
72. syne2a 63 0.9 0.900 - - - - - - - - spectrin repeat containing, nuclear envelope 2a
73. wu:fd14a06 wu:fd14a06 243 0.899 0.899 - - - - - - - -
74. baiap2a ENSDARG00000062799 231 0.898 0.898 - - - - - - - - BAI1-associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-060421-2756]
75. gng12a ENSDARG00000003375 1250 0.897 0.897 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
76. armc5 ENSDARG00000078083 114 0.897 0.897 - - - - - - - - armadillo repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7382]
77. SNORD14 SNORD14 31 0.896 0.896 - - - - - - - -
78. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.896 0.896 - - - - - - - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
79. lysmd1 ENSDARG00000054789 277 0.895 0.895 - - - - - - - - LysM, putative peptidoglycan-binding, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1094]
80. si:ch211-134c9.2 ENSDARG00000095593 86 0.893 0.893 - - - - - - - - si:ch211-134c9.2 [Source:ZFIN;Acc:ZDB-GENE-090312-73]
81. zgc:162183 ENSDARG00000074663, ENSDARG00000116229 403 0.891 0.891 - - - - - - - - zgc:162183 [Source:ZFIN;Acc:ZDB-GENE-070410-30]
82. SLC27A3 SLC27A3 240 0.891 0.891 - - - - - - - -
83. smg8 ENSDARG00000061378 1164 0.89 0.890 - - - - - - - - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
84. ripply1 ENSDARG00000054103 367 0.888 0.888 - - - - - - - - ripply transcriptional repressor 1 [Source:ZFIN;Acc:ZDB-GENE-060113-1]
85. slc9a8 ENSDARG00000020699 206 0.888 0.888 - - - - - - - - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
86. amy2a ENSDARG00000013856 13 0.887 0.887 - - - - - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
87. si:ch211-149b19.3 ENSDARG00000076011 306 0.886 0.886 - - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
88. TMEM216 ENSDARG00000091576 357 0.886 0.886 - - - - - - - - transmembrane protein 216 [Source:HGNC Symbol;Acc:HGNC:25018]
89. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 0.886 0.886 - - - - - - - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
90. TJP1 TJP1 153 0.884 0.884 - - - - - - - -
91. emid1 ENSDARG00000076119 862 0.883 0.883 - - - - - - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
92. rapgef5a ENSDARG00000075271 282 0.883 0.883 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
93. fbxo32 ENSDARG00000040277 93 0.883 0.883 - - - - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
94. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.883 0.883 - - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
95. snx25 ENSDARG00000099545 84 0.882 0.882 - - - - - - - - sorting nexin 25 [Source:ZFIN;Acc:ZDB-GENE-121105-11]
96. cenpo ENSDARG00000075619, ENSDARG00000111160 378 0.881 0.881 - - - - - - - - centromere protein O [Source:ZFIN;Acc:ZDB-GENE-070928-16]
97. cutc ENSDARG00000077306, ENSDARG00000113409 238 0.881 - 0.881 - - - - - - - cutC copper transporter homolog (E. coli) [Source:ZFIN;Acc:ZDB-GENE-041010-144]
98. brd1a ENSDARG00000013596, ENSDARG00000116694 547 0.881 0.881 - - - - - - - - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
99. morn2 ENSDARG00000071360 44 0.881 0.881 - - - - - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
100. gchfr ENSDARG00000098588 169 0.878 0.878 - - - - - - - - GTP cyclohydrolase I feedback regulator [Source:ZFIN;Acc:ZDB-GENE-040426-1731]

There are 475 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA