Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbm17

Gene Name Gene ID Reads Annotation
rbm17 ENSDARG00000031346 2079 RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]










Genes with expression patterns similar to rbm17

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbm17 ENSDARG00000031346 2079 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
2. gon4l ENSDARG00000005867 982 2.425 - - - 0.714 0.973 - 0.738 - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
3. pias2 ENSDARG00000092979, ENSDARG00000115060 2317 2.149 - 0.711 - - - 0.716 - - 0.722 protein inhibitor of activated STAT, 2 [Source:ZFIN;Acc:ZDB-GENE-060424-1]
4. fibpa ENSDARG00000016058 2148 1.797 - - - - 0.928 - 0.869 - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
5. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.785 - - - - 0.964 0.821 - - -
6. acacb ENSDARG00000061994 1886 1.768 - - - - 0.956 - 0.812 - - acetyl-CoA carboxylase beta [Source:ZFIN;Acc:ZDB-GENE-060526-132]
7. arhgap29b ENSDARG00000017748 812 1.751 - - - - 0.967 0.784 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
8. tuft1b ENSDARG00000071010 909 1.744 - - - - 0.970 0.774 - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
9. CASKIN2_1 CASKIN2_1 2299 1.742 - - - 0.771 0.971 - - - -
10. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.741 - 0.779 - - 0.962 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
11. MTA1 ENSDARG00000007198 731 1.723 - - - 0.756 0.967 - - - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
12. commd8 ENSDARG00000028201 1318 1.713 - - - - 0.959 0.754 - - - COMM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-061103-124]
13. smurf2 ENSDARG00000038067 2057 1.708 - - - - 0.972 0.736 - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
14. arpc4 ENSDARG00000054063 6150 1.7 - - - - 0.889 0.811 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
15. phf16 phf16 1116 1.696 - - - 0.730 0.966 - - - -
16. MDC1 ENSDARG00000086764 1851 1.695 - - - - 0.957 - - - 0.738 mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
17. ccnb1 ENSDARG00000051923 3226 1.679 - - - - 0.975 0.704 - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
18. smg7 ENSDARG00000060767 2759 1.677 - - - - 0.947 0.730 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
19. mier1a ENSDARG00000041072 1690 1.664 - - - - 0.946 - 0.718 - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
20. med23 ENSDARG00000029157 4453 1.662 - - - - 0.952 - 0.710 - - mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
21. CABZ01055343.2 CABZ01055343.2 10312 1.629 - - - - - 0.830 0.799 - -
22. tmem101 ENSDARG00000114508 494 1.625 - - - - - 0.763 0.862 - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
23. stard3 ENSDARG00000017809 727 1.602 0.745 - - - - 0.857 - - - StAR-related lipid transfer (START) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-001120-2]
24. sri ENSDARG00000058593 13152 1.585 - - - - 0.791 0.794 - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
25. guk1a ENSDARG00000030340 517 1.584 - 0.714 - - - 0.870 - - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
26. C2H6orf52 C2H6orf52 2847 1.577 0.810 - - - - 0.767 - - -
27. txnl1 ENSDARG00000011921 692 1.57 - 0.711 - - - 0.859 - - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
28. eif2s1a ENSDARG00000005827 5992 1.563 - - - - - 0.754 0.809 - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
29. nfe2l3 ENSDARG00000019810 3682 1.558 - - - - - 0.728 0.830 - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
30. WDR83OS ENSDARG00000025554 7117 1.55 0.749 - - - 0.801 - - - - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
31. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.55 - - - - - - 0.766 - 0.784 transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
32. src ENSDARG00000008107 3643 1.549 - - - - 0.846 0.703 - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
33. CABZ01070579.1 ENSDARG00000117759 1046 1.547 - - - 0.773 - - 0.774 - -
34. zfand5b ENSDARG00000002271 4145 1.545 - - - - 0.833 - 0.712 - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
35. ubtd2 ENSDARG00000069184, ENSDARG00000109249 1658 1.532 - 0.709 - - - - 0.823 - - ubiquitin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-473]
36. fbl ENSDARG00000053912 5891 1.524 - - - - 0.779 0.745 - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
37. nus1 ENSDARG00000027813 1417 1.522 - - - - - 0.749 0.773 - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
38. HIPK1_1 HIPK1_1 8096 1.521 - - - - 0.775 0.746 - - -
39. rfx1b ENSDARG00000075904 1175 1.52 - - - 0.748 - 0.772 - - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
40. ccnd2b ENSDARG00000070408 411 1.519 - 0.748 - - - 0.771 - - - cyclin D2, b [Source:ZFIN;Acc:ZDB-GENE-050420-354]
41. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.518 - 0.739 - - - 0.779 - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
42. ogdha ENSDARG00000034270 10334 1.514 - 0.734 - - - - 0.780 - - oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
43. STARD4 ENSDARG00000102477 411 1.506 - - - - - 0.715 0.791 - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
44. CABZ01027552.1 CABZ01027552.1 760 1.505 - - - - - 0.755 0.750 - -
45. wdr37 ENSDARG00000074611 468 1.501 - - - 0.702 - - 0.799 - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
46. ZNF576 ZNF576 1447 1.501 - - - - - 0.779 0.722 - -
47. ttk ENSDARG00000041361 3911 1.5 0.724 - - - - 0.776 - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
48. ncoa3 ENSDARG00000077404 1957 1.495 - 0.763 - - - - 0.732 - - nuclear receptor coactivator 3 [Source:ZFIN;Acc:ZDB-GENE-051107-8]
49. selj 884 1.493 - - - - - 0.755 0.738 - - selenoprotein J
50. gtf2e1 ENSDARG00000000542, ENSDARG00000115244 899 1.48 0.778 - - - - 0.702 - - - general transcription factor IIE, polypeptide 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041210-221]
51. ube2j1 ENSDARG00000033489 497 1.479 - - - - - 0.746 0.733 - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
52. pagr1 ENSDARG00000076966 1430 1.479 0.743 0.736 - - - - - - - PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]
53. dync1li2 ENSDARG00000035924, ENSDARG00000110202 1429 1.476 - - - 0.760 - - - - 0.716 dynein, cytoplasmic 1, light intermediate chain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-156]
54. fam63a 381 1.474 0.732 - - - - - 0.742 - - family with sequence similarity 63, member A, transcript variant X1
55. nfkbiaa ENSDARG00000005481 948 1.474 - - - - - 0.722 0.752 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
56. sp4 ENSDARG00000005186 2904 1.467 - - - - 0.703 - 0.764 - - sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
57. TSPAN4 TSPAN4 941 1.466 - - - - - 0.736 0.730 - -
58. fam50a ENSDARG00000024895 3020 1.462 - 0.724 - 0.738 - - - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
59. necap2 ENSDARG00000046002 4372 1.451 - - - - - 0.747 0.704 - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
60. setd8b 2528 1.445 - - - 0.727 - - 0.718 - - SET domain containing (lysine methyltransferase) 8b
61. ccdc43 ENSDARG00000054446 757 1.443 - - - 0.714 - - 0.729 - - coiled-coil domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1587]
62. xrcc1 ENSDARG00000009494 1346 1.441 - - - - - 0.711 0.730 - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
63. ppp1r12a ENSDARG00000010784 4333 1.441 - - - 0.709 - 0.732 - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
64. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.426 - - - - - - 0.702 0.724 - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
65. FP103059.1 FP103059.1 750 1.426 - - - - - 0.719 0.707 - -
66. TTL ENSDARG00000062418 3043 1.415 - 0.705 - - - - - - 0.710 tubulin tyrosine ligase [Source:ZFIN;Acc:ZDB-GENE-060929-608]
67. ahcyl1 ENSDARG00000056331 1765 1.411 - 0.706 - - - - 0.705 - - adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
68. gcfc2 ENSDARG00000079020 479 0.975 - - - - 0.975 - - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
69. rybpa ENSDARG00000037773 904 0.974 - - - - 0.974 - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
70. nup98 ENSDARG00000074955 3998 0.974 - - - - 0.974 - - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
71. gpr161 ENSDARG00000055659 454 0.973 - - - - 0.973 - - - - G protein-coupled receptor 161 [Source:ZFIN;Acc:ZDB-GENE-030616-58]
72. tmem62 ENSDARG00000053890 1233 0.973 - - - - 0.973 - - - - transmembrane protein 62 [Source:ZFIN;Acc:ZDB-GENE-040426-1837]
73. dhx9 ENSDARG00000079725 1241 0.973 - - - - 0.973 - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
74. anapc1 ENSDARG00000075687 488 0.973 - - - - 0.973 - - - - anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12]
75. ikbkb ENSDARG00000079123 498 0.973 - - - - 0.973 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
76. si:ch211-282k23.2 ENSDARG00000093591 447 0.972 - - - - 0.972 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
77. pcdh18a ENSDARG00000089805 1096 0.972 - - - - 0.972 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
78. brd7 ENSDARG00000008380 3654 0.972 - - - - 0.972 - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
79. frem1b ENSDARG00000062402 750 0.972 - - - - 0.972 - - - - Fras1 related extracellular matrix 1b [Source:ZFIN;Acc:ZDB-GENE-050208-783]
80. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.971 - - - - 0.971 - - - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
81. invs ENSDARG00000002213 261 0.971 - - - - 0.971 - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
82. nol8 ENSDARG00000044143 425 0.971 - - - - 0.971 - - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
83. slc39a13 ENSDARG00000000442 1367 0.971 - - - - 0.971 - - - - solute carrier family 39 (zinc transporter), member 13 [Source:ZFIN;Acc:ZDB-GENE-030616-17]
84. gnao1a ENSDARG00000016676 8184 0.971 - - - - 0.971 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
85. farp1 ENSDARG00000074381 406 0.971 - - - - 0.971 - - - - FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
86. aatkb ENSDARG00000104442 392 0.971 - - - - 0.971 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
87. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.971 - - - - 0.971 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
88. wfikkn2a ENSDARG00000013460 859 0.971 - - - - 0.971 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
89. Mar-01 Mar-01 176 0.971 - - - - 0.971 - - - -
90. CHD6 ENSDARG00000017244 219 0.971 - - - - 0.971 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
91. rassf10a 417 0.97 - - - - 0.970 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
92. CR933820.2 CR933820.2 152 0.97 - - - - 0.970 - - - -
93. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.97 - - - - 0.970 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
94. slc38a4 ENSDARG00000018149 2344 0.97 - - - - 0.970 - - - - solute carrier family 38, member 4 [Source:ZFIN;Acc:ZDB-GENE-041010-14]
95. cdan1 ENSDARG00000042261 658 0.97 - - - - 0.970 - - - - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
96. zgc:111974 zgc:111974 1386 0.97 - - - - 0.970 - - - -
97. C8H1orf174 C8H1orf174 372 0.97 - - - - 0.970 - - - -
98. BX548000.3 BX548000.3 241 0.97 - - - - 0.970 - - - -
99. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 0.97 - - - - 0.970 - - - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
100. gsto2 ENSDARG00000033285 583 0.97 - - - - 0.970 - - - - glutathione S-transferase omega 2 [Source:ZFIN;Acc:ZDB-GENE-041114-67]

There are 1380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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