Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbl1

Gene Name Gene ID Reads Annotation
rbl1 ENSDARG00000008141 1217 retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]










Genes with expression patterns similar to rbl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbl1 ENSDARG00000008141 1217 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
2. C11H12orf10 C11H12orf10 1305 1.877 0.881 - 0.996 - - - - - -
3. rabl6 rabl6 489 1.87 0.961 - - - - - 0.909 - -
4. yth2 yth2 3716 1.823 0.838 - 0.985 - - - - - -
5. cry2a cry2a 2728 1.807 0.814 - 0.993 - - - - - -
6. nanos1 ENSDARG00000109337 2494 1.79 - - 0.994 - - - 0.796 - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
7. slc1a6 ENSDARG00000010096 764 1.761 - - 0.998 - - - 0.763 - - solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]
8. mtx2 ENSDARG00000029415 2205 1.76 - - 0.989 - - - 0.771 - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
9. si:ch211-270n8.3 87 1.755 0.952 - - - - - 0.803 - - si:ch211-270n8.3, transcript variant X2
10. arcn1b ENSDARG00000031214 4529 1.753 - - 0.984 0.769 - - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
11. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.748 - - 0.966 - - - 0.782 - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
12. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.741 0.746 - 0.995 - - - - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
13. rnaseh2a ENSDARG00000018891 1979 1.728 - - 0.902 - - - 0.826 - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
14. ptpn21 ENSDARG00000062248 2010 1.728 0.958 0.770 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
15. tnfrsf1a ENSDARG00000018569 842 1.727 0.942 - - 0.785 - - - - - tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
16. CASKIN2_1 CASKIN2_1 2299 1.713 0.843 - - - - - 0.870 - -
17. map2k2a ENSDARG00000006609 856 1.709 0.895 - - 0.814 - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
18. cacnb2a ENSDARG00000099045 374 1.699 - 0.701 0.998 - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
19. BICD2 ENSDARG00000075571 401 1.696 0.968 0.728 - - - - - - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
20. tom1 ENSDARG00000104581 1457 1.695 0.876 - - 0.819 - - - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
21. tjp3 ENSDARG00000002909 1978 1.685 0.788 - 0.897 - - - - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
22. wdr35 ENSDARG00000069269 492 1.684 0.960 - - 0.724 - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
23. plcd3a ENSDARG00000052957 467 1.681 0.935 - - - - - 0.746 - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
24. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.675 - - 0.903 - - - 0.772 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
25. kif1b ENSDARG00000037020 2124 1.675 0.951 0.724 - - - - - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
26. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.667 0.765 - 0.902 - - - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
27. mybl2 mybl2 1341 1.654 0.951 - - - - - 0.703 - -
28. gmfb ENSDARG00000028327 6522 1.649 0.932 - - - - - - 0.717 - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
29. leo1 ENSDARG00000055357 1644 1.614 0.879 0.735 - - - - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
30. dyrk1ab ENSDARG00000023814 1769 1.613 0.806 - - - - - - 0.807 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
31. syncripl ENSDARG00000026723 3889 1.597 0.882 - - - - - 0.715 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
32. clic5b_1 ENSDARG00000070584 149 1.595 - 0.788 - - - - 0.807 - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
33. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.595 0.895 - - - - - 0.700 - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
34. LRP10 ENSDARG00000054539 1895 1.592 0.889 - - 0.703 - - - - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
35. otud5a ENSDARG00000059006 2073 1.587 0.883 - - - - 0.704 - - - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
36. sec22a ENSDARG00000078328 1207 1.586 0.848 - - - - - - 0.738 - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
37. TRIM14 TRIM14 1424 1.565 0.856 - - - - - 0.709 - -
38. wdr43 ENSDARG00000077264 1992 1.525 - - - - - - 0.732 0.793 - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
39. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.524 0.804 0.720 - - - - - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
40. soul2 ENSDARG00000039499 1469 1.517 0.801 - - - - - 0.716 - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
41. zgc:112998 ENSDARG00000079760 380 1.516 - 0.720 - - - - 0.796 - - zgc:112998 [Source:ZFIN;Acc:ZDB-GENE-050320-134]
42. TUBGCP6 1991 1.5 - 0.741 - 0.759 - - - - - tubulin, gamma complex associated protein 6
43. SLC5A6 SLC5A6 179 1.489 - - - 0.734 - - 0.755 - -
44. REXO4 ENSDARG00000088619 655 1.489 - 0.760 - - - - 0.729 - - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
45. akirin2 ENSDARG00000058729 13245 1.488 0.786 - - - - - 0.702 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
46. EML4_1 EML4_1 8736 1.484 0.716 0.768 - - - - - - -
47. TMEM17 ENSDARG00000116334 218 1.483 - - - - - - 0.723 0.760 - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
48. wdr54 ENSDARG00000010248 245 1.482 - - - 0.733 - - 0.749 - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
49. fam173a ENSDARG00000041223, ENSDARG00000113102 639 1.461 - 0.727 - - - - 0.734 - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
50. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.456 - - - 0.734 - - 0.722 - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
51. si:dkey-11c5.11 ENSDARG00000096637 130 1.443 - - - 0.730 - - 0.713 - - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
52. zgc:92242 ENSDARG00000029443 367 1.443 - 0.702 - 0.741 - - - - - zgc:92242 [Source:ZFIN;Acc:ZDB-GENE-040718-371]
53. wrap53 ENSDARG00000086150 975 1.443 - 0.724 - - - - 0.719 - - WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
54. AL929322.1 AL929322.1 300 1.417 - 0.705 - - - - 0.712 - -
55. si:dkey-240e12.6 ENSDARG00000110137 674 0.998 - - 0.998 - - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
56. CR954963.1 ENSDARG00000097153 1135 0.998 - - 0.998 - - - - - -
57. myo1ea ENSDARG00000036179 891 0.998 - - 0.998 - - - - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
58. zgc:171759 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 340 0.998 - - 0.998 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
59. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.998 - - 0.998 - - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
60. mknk1 ENSDARG00000018411 749 0.998 - - 0.998 - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
61. ZBTB41 ENSDARG00000054984 464 0.998 - - 0.998 - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
62. nol12 ENSDARG00000038027 2288 0.997 - - 0.997 - - - - - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
63. plxnc1 ENSDARG00000015278 501 0.997 - - 0.997 - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
64. wdr16 wdr16 532 0.997 - - 0.997 - - - - - -
65. TRIM35_10 TRIM35_10 484 0.997 - - 0.997 - - - - - -
66. dna2 ENSDARG00000078759 846 0.997 - - 0.997 - - - - - - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
67. dhdds ENSDARG00000039851 1135 0.997 - - 0.997 - - - - - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
68. ect2 ENSDARG00000007278 1193 0.997 - - 0.997 - - - - - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
69. celsr1b ENSDARG00000058259 1219 0.997 - - 0.997 - - - - - - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
70. laptm4a ENSDARG00000006397 1698 0.997 - - 0.997 - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
71. MYO1D ENSDARG00000036863 768 0.997 - - 0.997 - - - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
72. fryl ENSDARG00000040001 3256 0.997 - - 0.997 - - - - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
73. elp6 ENSDARG00000060445, ENSDARG00000115612 458 0.997 - - 0.997 - - - - - - elongator acetyltransferase complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-060825-249]
74. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.997 - - 0.997 - - - - - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
75. daam1b ENSDARG00000009689 1520 0.997 - - 0.997 - - - - - - dishevelled associated activator of morphogenesis 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4212]
76. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 0.997 - - 0.997 - - - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
77. abhd4 ENSDARG00000102887 748 0.997 - - 0.997 - - - - - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
78. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.997 - - 0.997 - - - - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
79. hdac10 ENSDARG00000086458 676 0.996 - - 0.996 - - - - - - histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
80. tlx2 ENSDARG00000011273 870 0.996 - - 0.996 - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
81. foxa2 ENSDARG00000003411 2309 0.996 - - 0.996 - - - - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
82. rnf14 ENSDARG00000043905 862 0.996 - - 0.996 - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
83. gmpr2 ENSDARG00000061301 1132 0.996 - - 0.996 - - - - - - guanosine monophosphate reductase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1238]
84. aplnra ENSDARG00000002172 955 0.996 - - 0.996 - - - - - - apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
85. sesn3 ENSDARG00000015822 5328 0.995 - - 0.995 - - - - - - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
86. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.995 - - 0.995 - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
87. TCEB3 2429 0.995 - - 0.995 - - - - - - transcription elongation factor B (SIII), polypeptide 3
88. six1b ENSDARG00000026473 1908 0.995 - - 0.995 - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
89. PLEKHH3 ENSDARG00000070174 2117 0.994 - - 0.994 - - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
90. SIK1 ENSDARG00000058606 1982 0.994 - - 0.994 - - - - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
91. itga3b ENSDARG00000012824 1872 0.994 - - 0.994 - - - - - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
92. lsm14aa ENSDARG00000006600 2298 0.993 - - 0.993 - - - - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
93. itgb1bp1 ENSDARG00000007169 2723 0.993 - - 0.993 - - - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
94. MALSU1 MALSU1 1251 0.993 - - 0.993 - - - - - -
95. hadhaa ENSDARG00000057128 2179 0.992 - - 0.992 - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
96. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 0.992 - - 0.992 - - - - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
97. PELP1 ENSDARG00000079313 5771 0.991 - - 0.991 - - - - - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
98. hectd1 ENSDARG00000054213 3501 0.991 - - 0.991 - - - - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
99. tmem47 ENSDARG00000057322 4691 0.991 - - 0.991 - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
100. mrps18b ENSDARG00000007065 2121 0.991 - - 0.991 - - - - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]

There are 1246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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