Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbfox3l

Gene Name Gene ID Reads Annotation
rbfox3l rbfox3l 34










Genes with expression patterns similar to rbfox3l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbfox3l rbfox3l 34 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. tecrl2 tecrl2 11 2.883 - 1.000 - - - 0.883 1.000 - -
3. TENM2 ENSDARG00000037122 48 2.826 0.826 - - - - 1.000 1.000 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
4. CABZ01084273.1 CABZ01084273.1 16 2.791 0.791 1.000 - - - - 1.000 - -
5. si:dkey-266f7.10 ENSDARG00000086613 7 2.791 0.791 - - - - 1.000 1.000 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
6. nebl ENSDARG00000021200 40 2.732 0.732 1.000 - - - - 1.000 - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
7. st8sia1_1 ENSDARG00000098221 16 2.731 - 1.000 - - - 0.849 0.882 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
8. C10H5orf63 C10H5orf63 17 2.702 - 1.000 - - - 0.702 1.000 - -
9. penka ENSDARG00000004869 161 2.645 0.762 0.991 - - - - 0.892 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
10. htr3a ENSDARG00000089212 51 2.638 0.779 1.000 - - 0.859 - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
11. slc17a6a ENSDARG00000001127 337 2.631 0.751 1.000 - - - - 0.880 - - solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
12. xkr8.1 ENSDARG00000004498 18 2.538 0.791 - - - 0.747 - 1.000 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
13. nrxn2a ENSDARG00000061454 291 2.44 0.713 0.881 - - - - 0.846 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
14. TOP1 ENSDARG00000086775 48 2.324 - 0.758 - 0.707 0.859 - - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
15. si:dkey-122c11.4 si:dkey-122c11.4 13 2 - 1.000 - - - - 1.000 - -
16. prdm14 ENSDARG00000045371 106 2 - 1.000 - - - - 1.000 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
17. hoxc9a ENSDARG00000092809 18 2 - 1.000 - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
18. DKK3 DKK3 12 2 - 1.000 - - - 1.000 - - -
19. her3 ENSDARG00000076857 131 2 - 1.000 - - - - 1.000 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
20. BX248582.3 BX248582.3 3 2 - - - - - 1.000 1.000 - -
21. mfsd4a mfsd4a 179 2 - 1.000 - - - 1.000 - - -
22. rab11bb_1 ENSDARG00000090086 7 2 - - - - - 1.000 1.000 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
23. arl11l arl11l 31 2 - 1.000 - - - - 1.000 - -
24. si:dkey-97l20.5 si:dkey-97l20.5 33 2 - 1.000 - - - 1.000 - - -
25. fam163b ENSDARG00000073914 46 2 - 1.000 - - - - 1.000 - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
26. RIMS1 RIMS1 9 2 - 1.000 - - - 1.000 - - -
27. CABZ01066439.2 CABZ01066439.2 5 2 - 1.000 - - - - 1.000 - -
28. gltpb ENSDARG00000077962 5 2 - 1.000 - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
29. lingo1a ENSDARG00000034165 179 1.964 - 1.000 - - - - 0.964 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
30. TMEM74 26 1.956 - 1.000 - - - 0.956 - - - transmembrane protein 74, transcript variant X3
31. slitrk3b ENSDARG00000074739 19 1.956 - - - - - 0.956 1.000 - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
32. cdk5r2b ENSDARG00000078671 20 1.936 0.936 - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
33. kcnc2 ENSDARG00000057468 12 1.934 - 1.000 - 0.934 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
34. si:dkey-32n7.7 ENSDARG00000063444 4 1.934 - 1.000 - 0.934 - - - - - si:dkey-32n7.7 [Source:ZFIN;Acc:ZDB-GENE-121214-179]
35. klf5b ENSDARG00000062106 7 1.92 - 1.000 - - 0.920 - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
36. tnr ENSDARG00000020771 20 1.913 - - - - 0.942 0.971 - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
37. slc5a9 ENSDARG00000005518 16 1.911 - - - - - 0.911 1.000 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
38. entpd3 ENSDARG00000035309 263 1.895 - 0.895 - - - - 1.000 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
39. ACAP2 ENSDARG00000060783 9 1.883 - - - - - 0.883 1.000 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
40. NPPC_1 NPPC_1 11 1.881 - 0.881 - - - - 1.000 - -
41. tap1 ENSDARG00000079766 75 1.88 - 1.000 - - 0.880 - - - - transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) [Source:ZFIN;Acc:ZDB-GENE-050517-43]
42. C18H15orf59 C18H15orf59 80 1.872 - 1.000 - - - 0.872 - - -
43. lingo1b ENSDARG00000035899 86 1.851 - 1.000 - - - 0.851 - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
44. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.849 - - - - - 0.849 1.000 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
45. opcml ENSDARG00000013005 18 1.849 - - - - - 0.849 1.000 - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
46. cntnap5b ENSDARG00000075189 16 1.849 - - - - - 0.849 1.000 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
47. tmem91 ENSDARG00000068456 81 1.844 - 1.000 - - - - 0.844 - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
48. si:ch211-39a7.1 ENSDARG00000037427 31 1.844 - - - - - 1.000 0.844 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
49. CD97_2 CD97_2 15 1.842 - - - 0.934 0.908 - - - -
50. CELF3 CELF3 163 1.837 0.939 0.898 - - - - - - -
51. gbx1 ENSDARG00000071418 871 1.836 - 0.909 - - - - 0.927 - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
52. nkx1.2lb ENSDARG00000099427 220 1.834 - 0.881 - - - - 0.953 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
53. trim46b ENSDARG00000058649 54 1.814 - 1.000 - - - - 0.814 - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
54. gpr22 gpr22 115 1.806 0.964 - - - - - 0.842 - -
55. scrt2 ENSDARG00000056175 4331 1.805 - 0.895 - - - - 0.910 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
56. cacng3b ENSDARG00000076401 91 1.795 0.795 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
57. lhx1a ENSDARG00000014018 958 1.793 - 0.903 - - - - 0.890 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
58. zgc:113307 ENSDARG00000044894 17 1.791 0.791 1.000 - - - - - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
59. FUT9 FUT9 91 1.791 0.791 1.000 - - - - - - -
60. si:dkey-200l5.4 ENSDARG00000095294 13 1.791 0.791 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
61. zgc:113210 ENSDARG00000002872 99 1.791 0.791 1.000 - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
62. SV2B SV2B 208 1.791 - 0.909 - - - - 0.882 - -
63. CLDN20 26 1.791 0.791 1.000 - - - - - - - claudin 20, transcript variant X2
64. CABZ01061873.1 CABZ01061873.1 51 1.791 - - - - - 1.000 0.791 - -
65. eef1a1a ENSDARG00000039502 234 1.786 - 0.881 - - - - 0.905 - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
66. gpr173 ENSDARG00000042922 238 1.783 - - - - - 0.783 1.000 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
67. slc17a6b ENSDARG00000041150 823 1.781 - 1.000 - - - - 0.781 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
68. si:ch211-237c9.3 si:ch211-237c9.3 17 1.778 - - - 0.934 - - 0.844 - -
69. amph ENSDARG00000007663 599 1.773 - 0.909 - - - - 0.864 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
70. syt4 ENSDARG00000036505 421 1.77 - 0.815 - - - - 0.955 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
71. si:ch211-138k19.2 si:ch211-138k19.2 398 1.766 - 1.000 - - - - 0.766 - -
72. GPC6_1 GPC6_1 34 1.76 - 1.000 - - - 0.760 - - -
73. KCNS3 KCNS3 82 1.755 - 1.000 - - - - 0.755 - -
74. si:dkey-193c22.1 ENSDARG00000093687 104 1.75 0.750 - - - - - 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
75. rgs9bp ENSDARG00000009466 41 1.749 - - - - 0.749 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
76. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.749 - - - - - 0.973 0.776 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
77. cacna1ab ENSDARG00000006923 12 1.747 - 1.000 - - 0.747 - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-3]
78. si:ch211-152f6.6 si:ch211-152f6.6 278 1.745 - 0.946 - - - - 0.799 - -
79. gria4b ENSDARG00000059368, ENSDARG00000114212, ENSDARG00000115594 255 1.743 - 1.000 - - - 0.743 - - - glutamate receptor, ionotropic, AMPA 4b [Source:ZFIN;Acc:ZDB-GENE-030131-8013]
80. GJD2_1 GJD2_1 3045 1.741 - 1.000 - - - - 0.741 - -
81. cacng2a ENSDARG00000032565 99 1.737 - - - - - 0.855 0.882 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
82. adcyap1a ENSDARG00000004015 67 1.733 0.733 - - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
83. ntng2a ENSDARG00000077367 43 1.732 0.732 - - - - - 1.000 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
84. ascc2 ENSDARG00000013058 228 1.731 - 1.000 - - - - 0.731 - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
85. neflb ENSDARG00000012426 298 1.73 - 1.000 - - - - 0.730 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
86. NTRK3 NTRK3 163 1.73 - 1.000 - - - - 0.730 - -
87. cx27.5 ENSDARG00000035553 12 1.724 - - - 0.831 0.893 - - - - connexin 27.5 [Source:ZFIN;Acc:ZDB-GENE-010619-2]
88. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.722 - 1.000 - - - - 0.722 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
89. otpa ENSDARG00000014201 2290 1.721 0.753 - - - - - 0.968 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
90. C21H5orf24 C21H5orf24 333 1.714 0.811 - - - - - 0.903 - -
91. fam219ab ENSDARG00000013813 591 1.708 - 1.000 - - - - 0.708 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
92. FRMPD1 34 1.704 - 1.000 - - - 0.704 - - - FERM and PDZ domain containing 1, transcript variant X3
93. nrg2b ENSDARG00000086585 100 1.704 0.704 - - - - - 1.000 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
94. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.702 - 1.000 - - - 0.702 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
95. sox12 ENSDARG00000025847 681 1.7 - 1.000 - - 0.700 - - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
96. dclk2 dclk2 719 1.699 0.774 - - - - 0.925 - - -
97. iqsec3b ENSDARG00000093091 10 1.699 0.791 - - - 0.908 - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
98. CHRNB4 ENSDARG00000101677 128 1.699 - 0.946 - - - - 0.753 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
99. MAP1A MAP1A 847 1.693 - 0.811 - - - - 0.882 - -
100. SMARCAD1 SMARCAD1 104 1.693 - - - - 0.773 0.920 - - -

There are 1662 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA