Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbfox3

Gene Name Gene ID Reads Annotation
rbfox3 rbfox3 1443










Genes with expression patterns similar to rbfox3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbfox3 rbfox3 1443 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. snap25a ENSDARG00000020609 4537 4.398 0.919 0.809 - - - 0.927 0.941 - 0.802 synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
3. CHL1 CHL1 1553 4.218 0.736 0.869 - - - 0.889 0.940 - 0.784
4. gap43 ENSDARG00000099744 4114 4.206 0.955 0.727 0.710 - - 0.879 0.935 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
5. stmn2a ENSDARG00000033234 2272 4.194 0.873 0.774 - - - 0.797 0.959 - 0.791 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
6. rusc1 ENSDARG00000078125 617 3.663 0.863 - - - - 0.963 0.943 - 0.894 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
7. scn8aa ENSDARG00000005775 792 3.659 0.860 0.865 - - - 0.953 0.981 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
8. slc1a2b ENSDARG00000102453 3136 3.656 0.875 0.853 - - - 0.949 0.979 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
9. syngr3a ENSDARG00000014871 405 3.63 0.948 0.859 - - - 0.895 0.928 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
10. slc32a1 ENSDARG00000059775 1092 3.598 0.895 0.813 - - - 0.912 0.978 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
11. stx1b ENSDARG00000000503 2724 3.59 0.812 0.871 - - - 0.922 0.985 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
12. gng3 ENSDARG00000009553 2530 3.58 0.853 0.843 - - - 0.935 0.949 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
13. amph ENSDARG00000007663 599 3.551 0.912 0.854 - - - 0.797 0.988 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
14. TUSC5 TUSC5 1436 3.543 0.910 0.851 - - - 0.799 0.983 - -
15. SNAP91 ENSDARG00000098809 556 3.525 - 0.776 - - - 0.921 0.968 - 0.860 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
16. lhx1a ENSDARG00000014018 958 3.501 0.877 0.756 - - - 0.939 0.929 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
17. TUBB8P7_1 TUBB8P7_1 2722 3.491 0.862 0.783 - - - 0.933 0.913 - -
18. MAP1A MAP1A 847 3.465 0.868 0.765 - - - 0.876 0.956 - -
19. scrt2 ENSDARG00000056175 4331 3.464 0.811 0.798 - - - 0.873 0.982 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
20. si:ch211-152f6.6 si:ch211-152f6.6 278 3.462 0.844 0.885 - - - 0.809 0.924 - -
21. scn2b ENSDARG00000101713 796 3.447 0.709 0.854 - - - 0.948 0.936 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
22. nova2 ENSDARG00000017673 7685 3.447 0.795 0.780 - - - 0.931 0.941 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
23. tmem59l ENSDARG00000003655 1536 3.438 0.883 - - - - 0.824 0.850 - 0.881 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
24. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.433 0.917 0.865 - - - 0.708 0.943 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
25. syt11a ENSDARG00000057913 1145 3.433 0.830 0.929 - - - 0.778 0.896 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
26. dbx2 2971 3.419 0.739 0.780 - - - 0.923 0.977 - - developing brain homeobox 2
27. lhx5 ENSDARG00000057936 785 3.4 0.888 - - - - 0.826 0.929 - 0.757 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
28. jag1a ENSDARG00000030289 1275 3.367 0.769 0.807 - - - 0.859 0.932 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
29. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.363 0.770 0.741 - - - 0.871 0.981 - -
30. sez6l2 ENSDARG00000076052 360 3.358 0.824 0.759 - - - 0.821 0.954 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
31. calb1 ENSDARG00000031598 252 3.351 0.790 0.833 - - - 0.858 0.870 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
32. lrrc4.1 ENSDARG00000069402 323 3.346 0.710 0.790 - - - 0.901 0.945 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
33. SV2B SV2B 208 3.34 0.772 0.854 - - - 0.787 0.927 - -
34. rtn1b ENSDARG00000021143 1682 3.336 0.760 0.851 - - - 0.875 0.850 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
35. nadl1.1 1200 3.331 0.718 0.760 - - - 0.932 0.921 - - neural adhesion molecule L1.1, transcript variant X1
36. rac3a ENSDARG00000090062 394 3.331 0.741 - - - - 0.769 0.965 - 0.856 Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
37. slc17a6b ENSDARG00000041150 823 3.329 0.753 0.833 - - - 0.783 0.960 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
38. vsnl1a ENSDARG00000023228 1584 3.308 0.769 0.811 - - - 0.839 0.889 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
39. nes ENSDARG00000088805 2710 3.305 0.782 0.778 - - - 0.842 0.903 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
40. rufy3 ENSDARG00000029692 3031 3.302 0.818 0.819 - - - 0.833 0.832 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
41. cacng3b ENSDARG00000076401 91 3.294 0.756 0.833 - - - 0.849 0.856 - - calcium channel, voltage-dependent, gamma subunit 3b [Source:ZFIN;Acc:ZDB-GENE-090828-1]
42. nrn1a ENSDARG00000071860 1311 3.29 0.840 - - - - 0.797 0.917 - 0.736 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
43. adam23a ENSDARG00000062323 580 3.282 0.791 0.745 - - - 0.898 0.848 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
44. zic1 ENSDARG00000015567 2520 3.275 0.916 0.828 - - - 0.733 0.798 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
45. nrxn3b ENSDARG00000062693 192 3.267 0.852 - - - - 0.792 0.774 - 0.849 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
46. lgi1a ENSDARG00000020493 1218 3.243 0.819 0.796 - - - 0.874 0.754 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
47. nrarpb ENSDARG00000018958 6225 3.242 0.711 0.713 - - - 0.874 0.944 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
48. neurog1 ENSDARG00000056130 3924 3.234 0.701 - - - - 0.857 0.965 - 0.711 neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
49. atp2b3b ENSDARG00000023445 1424 3.229 0.811 0.787 - - - 0.788 0.843 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
50. zic4 ENSDARG00000031307 1228 3.197 0.809 0.779 - - - 0.848 0.761 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
51. nptx1l ENSDARG00000074671 569 3.182 0.716 0.899 - - - 0.712 0.855 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
52. penka ENSDARG00000004869 161 3.168 0.869 0.827 - - - 0.731 0.741 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
53. pou4f2 ENSDARG00000069737 451 3.069 0.731 - - - - 0.868 0.733 - 0.737 POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
54. gad2 ENSDARG00000015537 724 2.999 - 0.732 - - - 0.730 0.735 - 0.802 glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
55. dpysl3 ENSDARG00000002587 4381 2.853 0.935 - - - - 0.964 0.954 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
56. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.838 0.940 - - - - 0.933 0.965 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
57. adam11 ENSDARG00000079204 298 2.816 0.945 - - - - 0.921 0.950 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
58. clstn3 ENSDARG00000073883 590 2.798 0.860 - - - - 0.949 0.989 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
59. pou4f1 ENSDARG00000005559 821 2.794 0.909 - - - - 0.932 0.953 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
60. tuba1c ENSDARG00000055216 8384 2.763 0.867 - - - - 0.929 0.967 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
61. MAP6 MAP6 643 2.753 0.914 0.939 - - - - 0.900 - -
62. STMN3 ENSDARG00000038465 1009 2.729 0.923 - - - - 0.820 0.986 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
63. CABZ01111990.1 CABZ01111990.1 4374 2.726 0.886 - - - - 0.880 0.960 - -
64. cdk5r1b ENSDARG00000045087 2075 2.723 0.839 - - - - 0.940 0.944 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
65. SPOCK1 ENSDARG00000074644 794 2.714 0.795 - - - - 0.977 0.942 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
66. olfm1b ENSDARG00000014053 1392 2.711 0.821 - - - - 0.902 0.988 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
67. dnajc5aa ENSDARG00000042948 2885 2.706 0.800 - - - - 0.955 0.951 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
68. rab39b rab39b 449 2.694 - - - - - 0.921 0.938 - 0.835
69. stmn2b ENSDARG00000070537 1586 2.693 0.854 - - - - 0.933 0.906 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
70. nova1 ENSDARG00000020178 4129 2.693 - 0.770 - - - 0.936 0.987 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
71. nbeaa ENSDARG00000070080 862 2.691 0.847 - - - - 0.865 0.979 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
72. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.688 0.859 - - - - 0.850 0.979 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
73. MAPK8IP1_1 MAPK8IP1_1 186 2.688 0.918 - - - - 0.858 0.912 - -
74. neflb ENSDARG00000012426 298 2.688 - 0.833 - - - 0.912 0.943 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
75. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.687 0.754 - - - - 0.944 0.989 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
76. mapk12b ENSDARG00000006409 2246 2.684 0.896 0.811 - - - - 0.977 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
77. cspg5a ENSDARG00000069981 1699 2.681 0.844 - - - - 0.912 0.925 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
78. cadm3 ENSDARG00000057013 1545 2.68 0.827 - - - - 0.910 0.943 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
79. rab3ab ENSDARG00000043835 1267 2.68 0.823 - - - - 0.884 0.973 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
80. TUBB8P7 TUBB8P7 1353 2.673 0.859 0.854 - - - 0.960 - - -
81. sypb ENSDARG00000002230 262 2.671 0.798 - - - - 0.879 0.994 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
82. EPB41L1 EPB41L1 1896 2.671 0.776 - - - - 0.927 0.968 - -
83. celf4 ENSDARG00000070045 1537 2.67 0.881 - - - - 0.865 0.924 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
84. AKT3 AKT3 1729 2.666 - - - - - 0.895 0.948 - 0.823
85. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.665 0.819 - - - - 0.902 0.944 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
86. necap1 ENSDARG00000020798 612 2.66 0.875 - - - - 0.861 0.924 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
87. epha4b ENSDARG00000011600 3110 2.658 0.795 - - - - 0.931 0.932 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
88. mllt11 ENSDARG00000071026 2518 2.658 0.863 - - - - 0.917 0.878 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
89. slc8a2b ENSDARG00000100592 598 2.655 0.730 - - - - 0.940 0.985 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
90. slc1a3a ENSDARG00000104431 9888 2.654 0.872 - - - - 0.909 0.873 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
91. TUBB8P7_2 TUBB8P7_2 565 2.652 - - - - - 0.855 0.938 - 0.859
92. nell2b ENSDARG00000062797 854 2.649 0.719 - - - - 0.947 0.983 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
93. negr1 ENSDARG00000021607 1051 2.648 0.901 - - - - 0.937 0.810 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
94. syt3 ENSDARG00000075830 430 2.647 0.897 - - - - 0.907 0.843 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
95. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.647 0.814 - - - - 0.847 0.986 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
96. SKOR2 SKOR2 1041 2.644 0.766 - - - - 0.894 0.984 - -
97. atp6v0cb ENSDARG00000036577 3472 2.64 0.776 - - - - 0.902 0.962 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
98. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.64 - 0.841 - - - 0.890 0.909 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
99. snap25b ENSDARG00000058117 469 2.637 0.772 - - - - 0.894 0.971 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
100. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.636 0.878 - - - - 0.840 0.918 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]

There are 2550 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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