Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbfox2

Gene Name Gene ID Reads Annotation
rbfox2 ENSDARG00000052182 6621 RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]










Genes with expression patterns similar to rbfox2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbfox2 ENSDARG00000052182 6621 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
2. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 2.718 - - - 0.752 - 0.969 0.997 - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
3. rapgef2 ENSDARG00000005482 2586 2.451 - - 0.744 - - - - 0.922 0.785 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
4. cdk11b ENSDARG00000102546 1579 2.28 0.735 - 0.739 - - - - - 0.806 cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
5. etf1 etf1 12861 2.231 0.734 - 0.791 0.706 - - - - -
6. hn1b hn1b 7325 2.221 - 0.737 - 0.704 - - - - 0.780
7. axin2 ENSDARG00000100149 4223 2.195 - 0.728 0.734 - - - - - 0.733 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
8. ube2e1 ENSDARG00000116649 10656 2.159 - 0.732 - 0.718 - - - 0.709 - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
9. lamb2 ENSDARG00000002084 3265 1.963 - - - - - 0.964 0.999 - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
10. atp2a3 ENSDARG00000060978 1408 1.946 - - - - - 0.987 - 0.959 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
11. FP102157.1 FP102157.1 1096 1.924 - - - - - 0.984 - 0.940 -
12. khdrbs1b ENSDARG00000070475 18157 1.842 - - - - - 0.853 0.989 - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
13. eif2d ENSDARG00000012929 2624 1.817 - - - - - - 1.000 - 0.817 eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
14. plcd1b ENSDARG00000034080 4074 1.811 - - 0.840 - - 0.971 - - - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
15. rhebl1 ENSDARG00000039162 3966 1.773 - - - - - 0.983 - - 0.790 Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
16. snrpc ENSDARG00000009871 9567 1.764 0.787 - - - - 0.977 - - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
17. eif5 ENSDARG00000003681 7986 1.748 - - - - - - 1.000 - 0.748 eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
18. pes ENSDARG00000018902 3286 1.74 0.755 - - - - 0.985 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
19. sipa1l2 ENSDARG00000061640 4545 1.739 - - 0.739 - - - 1.000 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
20. pank2 ENSDARG00000003311 881 1.734 - - - - - 0.985 - - 0.749 pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
21. wu:fb12e11 wu:fb12e11 2332 1.726 - - 0.727 - - - 0.999 - -
22. map3k1 ENSDARG00000098405 3043 1.723 - 0.723 - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
23. olfml2a ENSDARG00000005648 1157 1.723 - - - - - 0.977 - - 0.746 olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
24. kdrl ENSDARG00000105215 766 1.715 - - - - - 0.976 - - 0.739 kinase insert domain receptor like [Source:ZFIN;Acc:ZDB-GENE-000705-1]
25. hnrnph1l ENSDARG00000005551 8727 1.711 - - - 0.718 - - 0.993 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
26. marcksl1b ENSDARG00000035715 37390 1.703 0.709 - - - - - 0.994 - - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
27. alox12 ENSDARG00000069463 5787 1.702 - - 0.849 - - - - 0.853 - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
28. zmat5 ENSDARG00000035434 983 1.701 - - 0.724 - - 0.977 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
29. mdh1a mdh1a 11035 1.7 - - 0.709 - - - 0.991 - -
30. psmd14 ENSDARG00000063100 15711 1.7 0.701 - - - - - 0.999 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
31. phf3 ENSDARG00000034768 1372 1.696 - - 0.741 - - - - 0.955 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
32. snx12 ENSDARG00000019060 9563 1.694 - - 0.717 - - 0.977 - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
33. twf1a ENSDARG00000115712 3465 1.69 - - 0.717 - - 0.973 - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
34. ncapd2 ENSDARG00000005058 2819 1.69 - - - 0.713 - - - 0.977 - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
35. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.676 0.717 - - - - 0.959 - - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
36. fkbp14 ENSDARG00000040695 7725 1.674 - - 0.727 - - 0.947 - - - FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
37. yipf3 ENSDARG00000020449 3312 1.659 - - - - - - - 0.934 0.725 Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
38. hnrpdl 14288 1.654 - - - - - 0.936 - 0.718 - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
39. tmem50a ENSDARG00000015757 3244 1.649 - - 0.724 - - - - 0.925 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
40. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.643 - - - 0.766 - 0.877 - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
41. TUBGCP6 1991 1.627 - - 0.729 - - - - - 0.898 tubulin, gamma complex associated protein 6
42. hsdl2 ENSDARG00000002523 2746 1.623 - 0.779 - - - - - - 0.844 hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
43. pdhb ENSDARG00000021346 9088 1.622 - - - - - 0.903 - 0.719 - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
44. oaz1b ENSDARG00000104782 37623 1.612 - - 0.757 - - - 0.855 - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
45. cnn3a ENSDARG00000099510 6063 1.583 - 0.711 - - - - - 0.872 - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
46. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 1.581 - - - - - 0.771 - 0.810 - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
47. kpna2 ENSDARG00000038066 7954 1.557 - - 0.832 0.725 - - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
48. cbx1a ENSDARG00000004189, ENSDARG00000110945 3297 1.555 - 0.804 - - - - - - 0.751 chromobox homolog 1a (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4945]
49. pleca ENSDARG00000062590 16794 1.552 - - - - - 0.848 - 0.704 - plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
50. zfand5a ENSDARG00000018898 3308 1.534 - 0.779 - - - - - - 0.755 zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]
51. pcbp2 ENSDARG00000099039 4248 1.53 - 0.728 - - - - - - 0.802 poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
52. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.52 - - - 0.742 - - - - 0.778 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
53. ttc3 ENSDARG00000086075 2157 1.516 - - 0.733 - - - - - 0.783 tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
54. EEF1E1 ENSDARG00000071774 3806 1.499 0.773 - 0.726 - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
55. sumo3a ENSDARG00000028119 13447 1.495 0.733 - - 0.762 - - - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
56. ddx6 ENSDARG00000061338 2514 1.483 0.741 - - - - - - - 0.742 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
57. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.471 - - 0.717 - - - - - 0.754 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
58. srrm2 ENSDARG00000037965 1967 1.47 - 0.763 0.707 - - - - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
59. wnk1b ENSDARG00000039392 3587 1.466 - - 0.725 - - - - - 0.741 WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
60. adnp2b ENSDARG00000028431 4683 1.462 - - 0.745 0.717 - - - - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
61. dag1 ENSDARG00000016153 10886 1.461 - - - - - 0.742 - - 0.719 dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
62. ppp2r5eb ENSDARG00000069118 1902 1.46 - - 0.729 - - - - - 0.731 protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
63. znf865 ENSDARG00000036698 15532 1.454 - 0.736 - - - - - - 0.718 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
64. scoca ENSDARG00000087333 1739 1.453 - 0.718 - - - - - - 0.735 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
65. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.453 - 0.740 0.713 - - - - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
66. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.449 - - - 0.737 - - - - 0.712 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
67. setd8a 2549 1.441 - - 0.719 - - - - 0.722 - SET domain containing (lysine methyltransferase) 8a
68. hexim1 ENSDARG00000036482 4317 1.431 0.723 - 0.708 - - - - - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
69. h2afvb ENSDARG00000116491 35692 1.419 0.702 0.717 - - - - - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
70. ahcyl1 ENSDARG00000056331 1765 1.417 - - 0.703 - - - - - 0.714 adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
71. uhrf1 ENSDARG00000103409 3282 1.406 0.704 - - 0.702 - - - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
72. mid2 ENSDARG00000034871 1001 1 - - - - - - 1.000 - - midline 2 [Source:ZFIN;Acc:ZDB-GENE-090220-1]
73. TMEM45A ENSDARG00000070743 1669 1 - - - - - - 1.000 - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
74. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 1 - - - - - - 1.000 - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
75. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 1 - - - - - - 1.000 - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
76. dcun1d1 ENSDARG00000099642 2043 1 - - - - - - 1.000 - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
77. aldh9a1b ENSDARG00000037061 2638 0.999 - - - - - - 0.999 - - aldehyde dehydrogenase 9 family, member A1b [Source:ZFIN;Acc:ZDB-GENE-040120-5]
78. myo10 ENSDARG00000017004 2191 0.999 - - - - - - 0.999 - - myosin X [Source:ZFIN;Acc:ZDB-GENE-070912-277]
79. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.999 - - - - - - 0.999 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
80. CRELD1 794 0.999 - - - - - - 0.999 - - cysteine rich with EGF like domains 1
81. mrpl13 ENSDARG00000056903 2768 0.999 - - - - - - 0.999 - - mitochondrial ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-050522-167]
82. MAST1_1 MAST1_1 1595 0.999 - - - - - - 0.999 - -
83. calb2b ENSDARG00000036344 2417 0.999 - - - - - - 0.999 - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
84. zgc:73340 823 0.999 - - - - - - 0.999 - - zgc:73340
85. oxr1b ENSDARG00000063310 929 0.999 - - - - - - 0.999 - - oxidation resistance 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2438]
86. TUB ENSDARG00000062165, ENSDARG00000111083 871 0.999 - - - - - - 0.999 - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
87. m6pr ENSDARG00000018432 1411 0.999 - - - - - - 0.999 - - mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
88. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.998 - - - - - - 0.998 - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
89. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 0.998 - - - - - - 0.998 - - high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
90. pak2a ENSDARG00000068177 8931 0.998 - - - - - - 0.998 - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
91. mtp_1 3298 0.998 - - - - - - 0.998 - - microsomal triglyceride transfer protein
92. ddost ENSDARG00000037318 10904 0.997 - - - - - - 0.997 - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
93. gpt2l ENSDARG00000019541 3397 0.997 - - - - - - 0.997 - - glutamic pyruvate transaminase (alanine aminotransferase) 2, like [Source:ZFIN;Acc:ZDB-GENE-050302-11]
94. mcm5 ENSDARG00000019507 6407 0.997 - - - - - - 0.997 - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
95. thrap3b ENSDARG00000098228 4396 0.997 - - - - - - 0.997 - - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
96. hoxc6a ENSDARG00000070343 2839 0.997 - - - - - - 0.997 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
97. psmb3 ENSDARG00000013938 10744 0.997 - - - - - - 0.997 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
98. elavl1 11672 0.997 - - - - - - 0.997 - - ELAV like RNA binding protein 1, transcript variant X3
99. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 0.996 - - - - - - 0.996 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
100. ap3m1 ENSDARG00000029928 3772 0.994 - - - - - - 0.994 - - adaptor related protein complex 3 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-021015-2]

There are 1073 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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