Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rbfox1l

Gene Name Gene ID Reads Annotation
rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]










Genes with expression patterns similar to rbfox1l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
2. atp2a1 ENSDARG00000020574 291561 6.016 0.871 0.847 0.898 - 0.884 - 0.780 0.866 0.870 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
3. tnnt3a ENSDARG00000030270 112506 5.252 0.923 - 0.896 - 0.908 - 0.821 0.773 0.931 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
4. tpma ENSDARG00000033683 752432 5.156 0.846 - 0.948 - 0.876 - 0.841 0.893 0.752 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
5. ttna ttna 101197 5.074 0.761 - 0.888 - 0.904 0.832 - 0.801 0.888
6. myoz1b ENSDARG00000071445 13381 5.066 0.822 - 0.832 - 0.703 0.952 - 0.834 0.923 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
7. mylz3 ENSDARG00000017441 303597 4.992 0.847 - 0.901 - 0.857 - 0.761 0.766 0.860 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
8. ckmb ENSDARG00000040565 505935 4.91 0.793 - 0.936 - 0.880 - 0.707 0.857 0.737 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
9. PTPLA PTPLA 4044 4.907 0.767 - 0.835 - 0.770 - 0.965 0.715 0.855
10. CR354540.2 ENSDARG00000117517 18452 4.862 0.718 - 0.815 - 0.825 - 0.942 0.710 0.852
11. lama2 ENSDARG00000099390 24734 4.643 0.776 - 0.724 0.875 0.704 - 0.821 - 0.743 laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
12. bin1 bin1 3199 4.575 0.775 - 0.787 - 0.726 - 0.869 0.705 0.713
13. si:ch211-226o13.2 84923 4.379 0.881 - 0.894 - 0.776 - - 0.882 0.946 si:ch211-226o13.2
14. klhl31 ENSDARG00000039066 13656 4.371 - - 0.924 - 0.874 - 0.817 0.855 0.901 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
15. ryr1b ENSDARG00000023797 5693 4.312 - - 0.880 - 0.780 - 0.972 0.779 0.901 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
16. klhl41b ENSDARG00000006757 10762 4.302 0.811 - 0.850 - 0.811 - 0.989 - 0.841 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
17. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.293 0.755 - 0.814 - - - 0.968 0.867 0.889 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
18. hhatla ENSDARG00000039051 6598 4.285 0.786 - 0.823 - 0.795 - 0.969 - 0.912 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
19. COL22A1 COL22A1 4473 4.284 0.739 - 0.810 - 0.759 0.990 0.986 - -
20. jph2 ENSDARG00000028625 6706 4.265 0.760 - - - 0.801 - 0.978 0.812 0.914 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
21. pbxip1a ENSDARG00000071015 4960 4.261 0.786 - 0.810 - - 0.981 0.954 - 0.730 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
22. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 4.258 0.872 - 0.900 0.800 0.876 - - 0.810 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
23. ckma ENSDARG00000035327, ENSDARG00000114671 418792 4.251 0.849 - 0.873 - 0.838 - - 0.820 0.871 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
24. trdn ENSDARG00000041779 4283 4.231 0.759 - 0.846 - 0.876 - 0.939 - 0.811 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
25. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 4.225 0.798 - 0.863 - - 0.722 0.973 0.869 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
26. pygma ENSDARG00000055518 15972 4.223 0.831 - - - 0.785 - 0.952 0.869 0.786 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
27. txlnbb ENSDARG00000076241 6396 4.222 0.837 - 0.770 - 0.842 - 0.958 - 0.815 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
28. acta1b ENSDARG00000055618 195597 4.219 0.800 - 0.929 - 0.800 - 0.784 0.906 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
29. rtn2a ENSDARG00000016088 12184 4.183 0.792 - 0.813 - 0.839 - 0.984 0.755 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
30. pvalb4 ENSDARG00000024433 35736 4.181 0.828 - 0.829 - 0.863 - 0.938 0.723 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
31. srl ENSDARG00000104587 11126 4.177 0.739 - 0.870 - 0.787 - 0.972 0.809 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
32. tgm2a ENSDARG00000070157 4516 4.176 0.786 - 0.882 - 0.761 - 0.945 - 0.802 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
33. mybpc2b ENSDARG00000021265 9618 4.165 0.784 - 0.820 - - - 0.910 0.809 0.842 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
34. SYNPO2L SYNPO2L 6697 4.164 0.788 - 0.867 - 0.793 - - 0.814 0.902
35. tnni2a.4 ENSDARG00000029069 122344 4.147 0.804 - 0.839 - 0.830 - - 0.879 0.795 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
36. zgc:92518 ENSDARG00000016343 3837 4.144 0.850 - 0.796 - 0.782 - 0.985 - 0.731 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
37. mdh1b ENSDARG00000018008 3196 4.136 0.779 - 0.842 - 0.709 - 0.989 - 0.817 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
38. BX294434.1 ENSDARG00000061272 6493 4.124 0.784 - 0.712 - - - 0.980 0.769 0.879 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
39. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.123 0.803 - 0.769 - - - 0.951 0.756 0.844 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
40. tnnt2d ENSDARG00000002988 7590 4.12 0.743 - 0.749 - - - 0.921 0.841 0.866 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
41. tmem161a ENSDARG00000012790 16094 4.117 0.854 - 0.827 - 0.788 - 0.756 - 0.892 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
42. cap2 ENSDARG00000104478 3266 4.105 0.794 - - - 0.711 - 0.948 0.779 0.873 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
43. adss ENSDARG00000002071 5497 4.094 0.724 - 0.827 - 0.831 - 0.970 - 0.742 adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
44. jph1b ENSDARG00000038826 7416 4.079 - - 0.881 - 0.757 0.976 0.763 0.702 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
45. CR847973.1 ENSDARG00000115516 8754 4.077 0.705 - 0.820 - - - 0.926 0.776 0.850
46. sgcd ENSDARG00000098573 4980 4.069 0.729 - 0.822 - 0.740 - 0.975 - 0.803 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
47. casq2 ENSDARG00000008982 21802 4.061 0.826 - 0.866 - 0.869 - - 0.797 0.703 calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
48. mdh2 ENSDARG00000043371 14485 4.054 - 0.761 0.778 - - - 0.943 0.753 0.819 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
49. C13H10orf71 3489 4.051 0.796 - 0.754 - 0.745 - 0.945 - 0.811 chromosome 13 C10orf71 homolog
50. prx ENSDARG00000017246 6183 4.032 0.770 - 0.765 - 0.714 - 0.971 - 0.812 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
51. EHBP1L1 EHBP1L1 2500 4.011 0.753 - 0.814 - 0.759 - 0.970 0.715 -
52. BX324201.1 BX324201.1 3302 3.998 0.777 - 0.756 - - - 0.959 0.724 0.782
53. fitm1 ENSDARG00000056464 1759 3.951 0.747 - 0.779 - - - 0.940 0.702 0.783 fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
54. trim63 trim63 2437 3.949 0.740 - 0.758 - 0.822 - 0.925 - 0.704
55. aldoab ENSDARG00000034470 88942 3.941 0.775 - 0.738 - 0.925 - 0.760 0.743 - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
56. pkmb ENSDARG00000099860 25094 3.824 0.727 - - - 0.742 - 0.807 0.846 0.702 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
57. myom1a ENSDARG00000061249 10230 3.561 - - 0.890 - - - 0.985 0.839 0.847 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
58. tmem38a ENSDARG00000024047 41883 3.535 0.799 - 0.957 - 0.920 - - 0.859 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
59. tnnt2c ENSDARG00000032242 28801 3.499 0.722 - - - 0.882 0.966 0.929 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
60. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.484 0.772 - 0.867 - - - 0.972 0.873 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
61. SPEG SPEG 4017 3.479 - - 0.888 - 0.875 - 0.951 - 0.765
62. actc1b ENSDARG00000099197 324665 3.464 0.887 - 0.861 - 0.931 - - 0.785 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
63. nexn ENSDARG00000057317 10972 3.443 0.787 - 0.863 - - - 0.975 - 0.818 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
64. tnni2b.1 ENSDARG00000035958 51597 3.442 0.925 - 0.942 - 0.826 - - 0.749 - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
65. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 3.41 - - - - 0.826 0.972 0.907 - 0.705 heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
66. tmod4 ENSDARG00000020890 17436 3.402 - - 0.870 - 0.766 0.849 - - 0.917 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
67. MYOM1 MYOM1 3870 3.39 0.741 - 0.825 - - - 0.961 - 0.863
68. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.378 0.760 - 0.849 - 0.818 - 0.951 - -
69. si:ch211-156j16.1 ENSDARG00000092035 7441 3.378 0.794 - 0.828 - - - 0.976 - 0.780 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
70. desma ENSDARG00000058656 30292 3.375 0.769 - 0.922 - 0.911 0.773 - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
71. nmrk2 ENSDARG00000067848 10293 3.352 - - 0.727 - 0.821 - 0.972 0.832 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
72. myhz1.3 ENSDARG00000067997 155509 3.348 0.841 - 0.871 - 0.852 - - 0.784 - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
73. myl1 ENSDARG00000014196 98943 3.345 0.750 - 0.943 - 0.906 - - 0.746 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
74. znf106a ENSDARG00000016651 6049 3.338 0.708 - - - 0.803 - 0.957 - 0.870 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
75. sptb ENSDARG00000030490 7128 3.337 0.799 - 0.800 - - - 0.977 - 0.761 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
76. txlnba ENSDARG00000020594 9385 3.336 - - 0.867 - 0.757 - 0.976 - 0.736 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
77. sar1ab ENSDARG00000033320 3984 3.323 0.733 - 0.828 - 0.790 - 0.972 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
78. ryr3 ENSDARG00000071331 6795 3.322 0.745 - 0.757 - - - 0.943 - 0.877 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
79. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.313 0.724 - 0.846 - 0.872 - - - 0.871 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
80. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.306 0.821 - 0.764 - - - - 0.803 0.918 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
81. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.3 0.797 - 0.867 - 0.703 - 0.933 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
82. rp42-pen rp42-pen 3395 3.296 - - 0.807 - 0.753 - 0.957 - 0.779
83. jph1a ENSDARG00000058603 2852 3.295 - - 0.769 - - - 0.960 0.714 0.852 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
84. chrnd ENSDARG00000019342 2728 3.286 0.772 - 0.826 - - - 0.944 - 0.744 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
85. TMPO TMPO 3264 3.284 0.814 - 0.799 - 0.700 - 0.971 - -
86. myoz2a ENSDARG00000012311 1373 3.283 0.790 - 0.731 - - - 0.947 - 0.815 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
87. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 3.283 0.745 - 0.716 - - 0.956 0.866 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
88. ttnb ttnb 73721 3.281 - - 0.860 - 0.892 - - 0.748 0.781
89. murcb murcb 13655 3.28 0.840 - 0.721 - - - 0.979 0.740 -
90. SYNPO2 SYNPO2 7382 3.278 - - 0.892 - 0.790 - 0.730 - 0.866
91. myhz2 ENSDARG00000012944 69921 3.255 0.742 - 0.744 - 0.844 - 0.925 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
92. vcl vcl 6667 3.252 0.826 - 0.911 - 0.753 - - - 0.762
93. stac3 ENSDARG00000098883 1765 3.245 0.764 - 0.789 - - - 0.938 - 0.754 SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
94. cfl2 ENSDARG00000014106 8051 3.226 0.702 - 0.880 - 0.791 - 0.853 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
95. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.215 0.786 - - - 0.749 - 0.960 - 0.720 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
96. xirp2a ENSDARG00000071113 7113 3.21 0.745 - - - 0.799 - 0.946 - 0.720 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
97. ank1 ank1 5209 3.206 0.753 - 0.770 - - - - 0.807 0.876
98. AIMP1 ENSDARG00000060036 4136 3.204 0.758 - 0.802 - 0.803 - - - 0.841 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
99. unc45b ENSDARG00000008433 8298 3.203 0.719 - - - 0.738 - 0.980 - 0.766 unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
100. MUSTN1 MUSTN1 1882 3.202 0.786 - 0.736 - 0.723 - 0.957 - -

There are 1186 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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