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Results for rbfox1

Gene Name Gene ID Reads Annotation
rbfox1 ENSDARG00000014746 2808 RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]










Genes with expression patterns similar to rbfox1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbfox1 ENSDARG00000014746 2808 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA binding fox-1 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-040927-11]
2. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.246 0.883 0.708 - - - 0.906 0.749 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
3. CABZ01111990.1 CABZ01111990.1 4374 3.065 0.790 0.750 - - - 0.784 0.741 - -
4. gfap ENSDARG00000025301 5584 2.601 0.897 - - - - 0.962 0.742 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
5. tuba1c ENSDARG00000055216 8384 2.587 0.870 - - - - 0.959 0.758 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
6. kcnc3a ENSDARG00000055855 1821 2.55 0.833 - - - - 0.943 0.774 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
7. si:ch73-21g5.7 ENSDARG00000093156 9412 2.545 0.955 - - - - 0.879 0.711 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
8. slc18a3a ENSDARG00000006356 1285 2.54 0.903 - - - - 0.915 0.722 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
9. stx1b ENSDARG00000000503 2724 2.537 0.840 - - - - 0.942 0.755 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
10. dpysl5a ENSDARG00000011141 1827 2.537 0.869 - - - - 0.910 0.758 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
11. mir10d-1 mir10d-1 860 2.536 0.883 - - - - 0.918 0.735 - -
12. nrarpb ENSDARG00000018958 6225 2.535 0.849 0.760 - - - 0.926 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
13. EFCC1 ENSDARG00000077826 1359 2.526 0.886 - - - - 0.889 0.751 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
14. myt1b ENSDARG00000102879 5411 2.524 0.838 - - - - 0.951 0.735 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
15. mapta ENSDARG00000089314 2038 2.522 0.921 - - - - 0.783 - - 0.818 microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
16. scrt2 ENSDARG00000056175 4331 2.518 0.795 - - - - 0.960 0.763 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
17. epha4b ENSDARG00000011600 3110 2.512 0.886 - - - - 0.901 0.725 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
18. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.511 0.854 - - - - 0.896 0.761 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
19. scg2b ENSDARG00000038574 345 2.51 0.721 - - - - 0.925 0.864 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
20. pcdh1gc5 ENSDARG00000104826 10052 2.504 0.829 - - - - 0.972 0.703 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
21. BX957337.1 BX957337.1 1685 2.501 0.792 - - - - 0.941 0.768 - -
22. hoxc4a ENSDARG00000070338 1382 2.496 0.795 - - - - 0.948 0.753 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
23. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.493 0.814 - - - - 0.941 0.738 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
24. hmgb1b ENSDARG00000030479 10398 2.476 0.796 - - - - 0.891 0.789 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
25. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.462 0.876 - - - - 0.855 0.731 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
26. snap25a ENSDARG00000020609 4537 2.456 0.759 - - - - 0.955 0.742 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
27. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.451 0.782 - - - - 0.930 0.739 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
28. ZFHX3 ENSDARG00000103057 7759 2.449 0.732 - - - - 0.919 0.798 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
29. ROBO3_1 ROBO3_1 468 2.446 0.757 - - - - 0.925 0.764 - -
30. pax6a ENSDARG00000103379 3061 2.444 0.758 - - - - 0.929 0.757 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
31. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.439 0.806 - - - - 0.873 0.760 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
32. AGO1 ENSDARG00000092644 4521 2.437 0.860 - - - - 0.853 0.724 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
33. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.437 0.761 - - - - 0.955 0.721 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
34. EPB41L1 EPB41L1 1896 2.434 0.827 - - - - 0.844 0.763 - -
35. UBE2QL1 ENSDARG00000079276 3474 2.431 0.814 - - - - 0.847 0.770 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
36. slc8a2b ENSDARG00000100592 598 2.43 0.912 - - - - 0.763 0.755 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
37. SNAP91 ENSDARG00000098809 556 2.43 0.801 - - - - 0.908 0.721 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
38. pcsk1nl ENSDARG00000076170 1232 2.425 0.811 - - - - 0.912 0.702 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
39. hoxa5a ENSDARG00000102501 1667 2.424 0.886 - - - - 0.821 0.717 - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
40. amph ENSDARG00000007663 599 2.416 0.743 - - - - 0.911 0.762 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
41. prdm12b ENSDARG00000007430 914 2.413 0.796 - - - - 0.872 0.745 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
42. msi1 ENSDARG00000010710 2634 2.412 0.762 - - - - 0.894 0.756 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
43. snap25b ENSDARG00000058117 469 2.411 0.860 - - - - 0.840 0.711 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
44. TUBA1A ENSDARG00000001889 25294 2.407 0.748 - - - - 0.959 0.700 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
45. rab3ab ENSDARG00000043835 1267 2.406 0.731 - - - - 0.947 0.728 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
46. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.404 0.711 - - - - 0.910 0.783 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
47. nefmb ENSDARG00000043697 2052 2.4 0.712 - - - - 0.831 0.857 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
48. SEMA7A ENSDARG00000078707 465 2.399 0.762 - - - - 0.928 0.709 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
49. stmn4l ENSDARG00000043932 654 2.397 0.735 - - - - 0.902 0.760 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
50. neurog1 ENSDARG00000056130 3924 2.395 0.879 - - - - 0.812 0.704 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
51. ckbb ENSDARG00000043257 3503 2.39 0.764 - - - - 0.923 0.703 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
52. clstn1 ENSDARG00000031720 5286 2.39 0.883 - - - - 0.804 0.703 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
53. gabra5 ENSDARG00000070730 156 2.385 0.805 - - - - 0.880 0.700 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
54. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.381 0.782 - - - - 0.890 0.709 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
55. ppp3ca ENSDARG00000004988 615 2.379 0.729 - - - - 0.909 0.741 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
56. stmn2b ENSDARG00000070537 1586 2.377 0.728 - - - - 0.948 0.701 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
57. atp6v0a1b ENSDARG00000015174 1052 2.365 0.756 - - - - 0.891 0.718 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
58. SPOCK1 ENSDARG00000074644 794 2.365 0.760 - - - - 0.874 0.731 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
59. tox ENSDARG00000032317 9126 2.357 0.777 - - - - 0.857 0.723 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
60. nell2b ENSDARG00000062797 854 2.355 0.700 - - - - 0.894 0.761 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
61. sall3b ENSDARG00000057586 982 2.353 0.750 - - - - 0.880 0.723 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
62. khsrp ENSDARG00000026489 15738 2.352 0.708 - - - - 0.856 0.788 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
63. atcaya ENSDARG00000071678 344 2.35 0.777 - - - - 0.815 0.758 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
64. slc1a2b ENSDARG00000102453 3136 2.347 0.705 - - - - 0.926 0.716 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
65. TUBB8P7_2 TUBB8P7_2 565 2.345 0.879 - - - - 0.723 0.743 - -
66. dnajc5aa ENSDARG00000042948 2885 2.339 0.732 - - - - 0.894 0.713 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
67. CU928222.1 ENSDARG00000097436 1662 2.338 0.840 - - - - 0.796 0.702 - -
68. CR847998.1 ENSDARG00000104784 518 2.337 0.712 - - - - 0.866 0.759 - -
69. fam60al 2846 2.326 0.727 - - - - 0.868 0.731 - - family with sequence similarity 60, member A, like
70. nbeaa ENSDARG00000070080 862 2.311 0.730 - - - - 0.818 0.763 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
71. chat chat 463 2.306 0.769 - - - - 0.826 0.711 - -
72. nxph1 ENSDARG00000033447 182 2.302 0.799 - - - - 0.760 0.743 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
73. stmn1b ENSDARG00000033655 9491 2.299 0.707 - - - - 0.889 0.703 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
74. CABZ01070258.1 ENSDARG00000105687 3643 2.296 0.783 0.767 - - - - 0.746 - -
75. C19H7orf41 C19H7orf41 2243 2.285 0.721 - - - - 0.853 0.711 - -
76. dbx2 2971 2.27 0.769 - - - - 0.761 0.740 - - developing brain homeobox 2
77. adarb1a ENSDARG00000041609 476 2.263 0.701 - - - - 0.805 0.757 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
78. cnrip1a ENSDARG00000091683 1491 2.253 0.714 - - - - 0.818 0.721 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
79. snap91 ENSDARG00000098809 844 2.251 0.715 - - - - 0.780 0.756 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
80. sypb ENSDARG00000002230 262 2.247 0.787 - - - - 0.707 0.753 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
81. irx1b ENSDARG00000056594 2224 2.247 0.702 - - - - 0.829 0.716 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
82. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.231 0.706 - - - - 0.757 0.768 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
83. her12 ENSDARG00000032963 754 2.206 0.744 - - - - 0.722 0.740 - - hairy-related 12 [Source:ZFIN;Acc:ZDB-GENE-040824-5]
84. gng3 ENSDARG00000009553 2530 2.203 0.708 - - - - 0.759 0.736 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
85. rab39b rab39b 449 2.193 0.771 - - - - 0.707 0.715 - -
86. gabrg2 ENSDARG00000053665 434 2.174 0.718 - - - - 0.726 0.730 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
87. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.163 0.723 - - - - 0.710 0.730 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
88. magi1a ENSDARG00000070145 547 2.144 - 0.708 - - - 0.732 0.704 - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
89. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.819 0.850 - - - - 0.969 - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
90. nadl1.1 1200 1.817 0.887 - - - - 0.930 - - - neural adhesion molecule L1.1, transcript variant X1
91. nova2 ENSDARG00000017673 7685 1.816 0.892 - - - - 0.924 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
92. C7H4orf48 C7H4orf48 1455 1.794 0.855 - - - - 0.939 - - -
93. vim ENSDARG00000010008 3551 1.783 0.865 - - - - 0.918 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
94. plp1a ENSDARG00000103732 3544 1.773 0.856 - - - - 0.917 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
95. MAP1A MAP1A 847 1.759 - - - - - 0.973 0.786 - -
96. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.759 - - - - - 0.960 0.799 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
97. mllt11 ENSDARG00000071026 2518 1.746 0.779 - - - - 0.967 - - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
98. ttc9b ENSDARG00000068421 251 1.743 0.868 - - - - 0.875 - - - tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
99. lfng ENSDARG00000037879 11783 1.741 0.823 - - - - 0.918 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
100. atp1b4 ENSDARG00000053262 1337 1.741 0.803 - - - - 0.938 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]

There are 2008 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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