Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbbp5

Gene Name Gene ID Reads Annotation
rbbp5 ENSDARG00000042147 702 retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]










Genes with expression patterns similar to rbbp5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbbp5 ENSDARG00000042147 702 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoblastoma binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-886]
2. nasp ENSDARG00000039208, ENSDARG00000114134 873 2.18 - - 0.711 - - - 0.729 0.740 - nuclear autoantigenic sperm protein (histone-binding) [Source:ZFIN;Acc:ZDB-GENE-030131-5511]
3. sae1 ENSDARG00000010487 2028 2.13 0.700 - - 0.727 - - 0.703 - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
4. mppe1 ENSDARG00000045416 340 1.657 0.828 - - 0.829 - - - - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
5. CABZ01081749.1 CABZ01081749.1 637 1.652 - 0.801 - 0.851 - - - - -
6. adora2aa ENSDARG00000033706, ENSDARG00000114856 144 1.648 - 0.831 - 0.817 - - - - - adenosine A2a receptor a [Source:ZFIN;Acc:ZDB-GENE-080723-28]
7. rbm22 ENSDARG00000010238 523 1.637 - 0.848 - 0.789 - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
8. gramd1a ENSDARG00000076689 1148 1.637 - 0.867 - 0.770 - - - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
9. ntn2 ENSDARG00000076748 368 1.601 - 0.864 - 0.737 - - - - - netrin 2 [Source:ZFIN;Acc:ZDB-GENE-050310-2]
10. CABZ01020840.1 ENSDARG00000090401 263 1.59 - 0.788 - 0.802 - - - - - apoptosis facilitator Bcl-2-like protein 14 [Source:NCBI gene;Acc:101885512]
11. pou3f3a ENSDARG00000042032 2835 1.59 0.818 - - - - - - - 0.772 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
12. si:ch211-113p18.3 ENSDARG00000087835 377 1.583 - - - 0.800 - - 0.783 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
13. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.58 - - - 0.845 - - 0.735 - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
14. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 1.573 - 0.857 - 0.716 - - - - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
15. haus5 ENSDARG00000019156 681 1.57 - - - 0.868 - - 0.702 - - HAUS augmin-like complex, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-041114-150]
16. stag1b ENSDARG00000062137 1814 1.569 0.715 - - 0.854 - - - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
17. tprg1l ENSDARG00000068149 1605 1.564 - 0.853 - 0.711 - - - - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
18. tmem231 ENSDARG00000042272 557 1.559 - 0.794 - 0.765 - - - - - transmembrane protein 231 [Source:ZFIN;Acc:ZDB-GENE-040426-1386]
19. reep3l reep3l 608 1.555 - 0.761 - 0.794 - - - - -
20. rnf20 ENSDARG00000016664 3641 1.554 - 0.718 - 0.836 - - - - - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
21. cry1b cry1b 152 1.543 0.720 0.823 - - - - - - -
22. raf1b ENSDARG00000059406 301 1.542 0.790 - - 0.752 - - - - - Raf-1 proto-oncogene, serine/threonine kinase b [Source:ZFIN;Acc:ZDB-GENE-090826-2]
23. syt2a ENSDARG00000025206 681 1.534 0.774 - - - - - 0.760 - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
24. pphln1 ENSDARG00000045692 1023 1.533 - 0.720 - 0.813 - - - - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
25. u2af2a ENSDARG00000012505 2920 1.532 - 0.739 - - - - 0.793 - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
26. mn1b ENSDARG00000079248 882 1.531 - - - 0.741 - - - 0.790 - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
27. tctex1d2 ENSDARG00000054255 320 1.531 - 0.825 - - - - 0.706 - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
28. cetn3 ENSDARG00000011825 1087 1.528 - - - 0.799 - - 0.729 - - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
29. zgc:153924 507 1.52 - - - 0.788 - - 0.732 - - zgc:153924
30. atad5a ENSDARG00000070568 1840 1.512 - - - - - - 0.730 0.782 - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
31. cspg5a ENSDARG00000069981 1699 1.511 0.790 - 0.721 - - - - - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
32. pias4a ENSDARG00000007081 4264 1.508 - 0.768 - - - - 0.740 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
33. ssh2a ENSDARG00000088440 1149 1.507 - 0.758 - - - - 0.749 - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
34. mettl6 ENSDARG00000070085 366 1.506 0.701 0.805 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
35. GRM2 GRM2 372 1.505 0.721 - - 0.784 - - - - -
36. CPNE4 CPNE4 268 1.495 0.707 - - - - - 0.788 - -
37. scdb ENSDARG00000030265 271 1.491 0.704 - - - - - 0.787 - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
38. si:dkey-71b5.9 si:dkey-71b5.9 398 1.49 0.761 0.729 - - - - - - -
39. vangl2 ENSDARG00000027397 2418 1.488 - - - 0.740 - - 0.748 - - VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
40. tmem106ba ENSDARG00000101936 549 1.486 - 0.737 - 0.749 - - - - - transmembrane protein 106Ba [Source:ZFIN;Acc:ZDB-GENE-040426-1336]
41. prp19 prp19 4804 1.485 - 0.736 - - - - 0.749 - -
42. tmem168a ENSDARG00000068705 498 1.485 - 0.748 - 0.737 - - - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
43. fam50a ENSDARG00000024895 3020 1.484 - - - 0.727 - - - 0.757 - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
44. nin ENSDARG00000060298 1558 1.482 0.739 - - - - - 0.743 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
45. MZT1 ENSDARG00000096668 2514 1.479 - 0.734 - - - - 0.745 - - mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
46. cenpj ENSDARG00000018121, ENSDARG00000113752 398 1.473 - 0.758 - 0.715 - - - - - centromere protein J [Source:ZFIN;Acc:ZDB-GENE-030131-6323]
47. NCKAP1L ENSDARG00000075748 129 1.468 - - - - - 0.736 0.732 - - NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]
48. kirrela 1170 1.466 - - - - - - 0.700 0.766 - kin of IRRE like a, transcript variant X2
49. rfx1b ENSDARG00000075904 1175 1.461 - - - 0.737 - - 0.724 - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
50. yeats4 ENSDARG00000045874 1168 1.449 - 0.721 - - - 0.728 - - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
51. map9 ENSDARG00000037276, ENSDARG00000115648 581 1.449 - 0.722 - - - 0.727 - - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
52. cdca8 ENSDARG00000043137 7541 1.449 - - - - - - 0.744 0.705 - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
53. brms1 ENSDARG00000051955 900 1.448 0.700 0.748 - - - - - - - BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
54. CDPF1 ENSDARG00000095705 553 1.436 - 0.729 - - - - 0.707 - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
55. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.433 - 0.727 - - - - - 0.706 - cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
56. sec22c ENSDARG00000063387 203 1.433 - 0.715 - 0.718 - - - - - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
57. nle1 ENSDARG00000057105 522 0.94 - 0.940 - - - - - - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
58. gtf2a1 ENSDARG00000011000 2026 0.928 - 0.928 - - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
59. nhp2l1a nhp2l1a 993 0.917 - 0.917 - - - - - - -
60. luc7l ENSDARG00000055903 3357 0.91 - 0.910 - - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
61. srfbp1 ENSDARG00000075323 2262 0.908 - 0.908 - - - - - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
62. cops4 ENSDARG00000043732 1508 0.903 - 0.903 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
63. gon4l ENSDARG00000005867 982 0.902 - - - 0.902 - - - - - gon-4-like (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-070117-2447]
64. DST ENSDARG00000101858 4395 0.9 - - - - - - 0.900 - - dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
65. THEM6_1 ENSDARG00000103914 469 0.897 - 0.897 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
66. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 0.894 - 0.894 - - - - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
67. usp10 ENSDARG00000103422 4247 0.89 - 0.890 - - - - - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
68. POLR2H ENSDARG00000038505 2031 0.888 - 0.888 - - - - - - - info polymerase (RNA) II (DNA directed) polypeptide H [Source:ZFIN;Acc:ZDB-GENE-050417-66]
69. NELL2A ENSDARG00000090690 840 0.888 - - - 0.888 - - - - - neural EGFL like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7972]
70. CR954963.1 ENSDARG00000097153 1135 0.888 - - - - - - 0.888 - -
71. nck2b ENSDARG00000043361 908 0.887 - 0.887 - - - - - - - NCK adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-235]
72. pdcd2l ENSDARG00000002754 417 0.884 - 0.884 - - - - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
73. MIIP ENSDARG00000088346 382 0.884 - 0.884 - - - - - - - migration and invasion inhibitory protein [Source:ZFIN;Acc:ZDB-GENE-130620-1]
74. prdx4 ENSDARG00000069013 1150 0.884 - 0.884 - - - - - - - peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
75. clasp1a ENSDARG00000010280 1158 0.883 - - - 0.883 - - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
76. gtf2h2 ENSDARG00000016514 380 0.88 - - - 0.880 - - - - - general transcription factor IIH, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1959]
77. RNF4 ENSDARG00000090993 688 0.877 - 0.877 - - - - - - - ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]
78. anxa13 ENSDARG00000013976 2476 0.877 - 0.877 - - - - - - - annexin A13 [Source:ZFIN;Acc:ZDB-GENE-010406-1]
79. BX294110.1 ENSDARG00000096875 1761 0.876 - 0.876 - - - - - - -
80. rqcd1 2301 0.873 - - - - - - 0.873 - - RCD1 required for cell differentiation1 homolog (S. pombe)
81. nupl1 nupl1 1100 0.873 - 0.873 - - - - - - -
82. prkra ENSDARG00000076718 606 0.871 - - - 0.871 - - - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
83. nsd1a ENSDARG00000060016 2974 0.871 - 0.871 - - - - - - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
84. mapk6 ENSDARG00000032103 6422 0.871 - 0.871 - - - - - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
85. xpa ENSDARG00000038114 543 0.871 - 0.871 - - - - - - - xeroderma pigmentosum, complementation group A [Source:ZFIN;Acc:ZDB-GENE-040426-1205]
86. dgcr14 1608 0.87 - 0.870 - - - - - - - DiGeorge syndrome critical region gene 14
87. nexmifb ENSDARG00000029296 416 0.87 - - - 0.870 - - - - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
88. rtkn2 rtkn2 1092 0.87 - - - 0.870 - - - - -
89. BX248510.1 ENSDARG00000075422 1449 0.867 - 0.867 - - - - - - - mitochondrial ribosomal protein L49 [Source:NCBI gene;Acc:558658]
90. KBTBD2 ENSDARG00000087226 707 0.867 - - - 0.867 - - - - - kelch repeat and BTB (POZ) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1262]
91. ttc19 ENSDARG00000074435 249 0.866 - 0.866 - - - - - - - tetratricopeptide repeat domain 19 [Source:ZFIN;Acc:ZDB-GENE-070912-490]
92. tfam ENSDARG00000063145 4524 0.866 - 0.866 - - - - - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
93. angpt1 ENSDARG00000030364 588 0.865 - 0.865 - - - - - - - angiopoietin 1 [Source:ZFIN;Acc:ZDB-GENE-010817-1]
94. furinb ENSDARG00000070971 213 0.865 - - - 0.865 - - - - - furin (paired basic amino acid cleaving enzyme) b [Source:ZFIN;Acc:ZDB-GENE-040901-2]
95. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 0.865 - 0.865 - - - - - - - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
96. mapre1a ENSDARG00000042927 164 0.864 - 0.864 - - - - - - - microtubule-associated protein, RP/EB family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6067]
97. si:dkey-61l1.4 ENSDARG00000092567 1012 0.863 - 0.863 - - - - - - - si:dkey-61l1.4 [Source:ZFIN;Acc:ZDB-GENE-070705-483]
98. tango6 ENSDARG00000034001 203 0.863 - 0.863 - - - - - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
99. tmem194a tmem194a 745 0.862 - - - 0.862 - - - - -
100. ptges3b ENSDARG00000089626 5666 0.861 - - - - - - 0.861 - - prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]

There are 1182 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA