Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rbb4

Gene Name Gene ID Reads Annotation
rbb4 rbb4 15541










Genes with expression patterns similar to rbb4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rbb4 rbb4 15541 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. hdac1 ENSDARG00000015427 19804 4.284 - - 0.873 0.925 0.886 0.721 - - 0.879 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
3. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.966 - 0.820 0.805 - - 0.830 0.711 - 0.800 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
4. srsf3b ENSDARG00000059360 14888 3.509 - 0.876 - 0.898 - 0.886 - - 0.849 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
5. hmgb3a ENSDARG00000056725 15668 3.356 - - - 0.893 - 0.707 0.852 - 0.904 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
6. arnt2 ENSDARG00000103697 5731 3.29 - 0.994 0.767 - - 0.748 - - 0.781 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
7. carm1 ENSDARG00000018698 5599 3.284 0.884 - - - - 0.722 0.871 - 0.807 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
8. puf60a ENSDARG00000032175 5618 3.263 - - 0.797 - - 0.876 0.786 - 0.804 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
9. whsc1 1701 3.218 0.881 - 0.754 - - - - 0.845 0.738 Wolf-Hirschhorn syndrome candidate 1
10. snrpd3l ENSDARG00000076283 7655 3.209 - - 0.741 - - 0.769 0.839 - 0.860 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
11. SSBP4 ENSDARG00000056483 5156 3.188 - - 0.723 0.871 - 0.811 0.783 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
12. smarca5 ENSDARG00000052348 15433 3.178 - - 0.706 - - 0.764 0.783 - 0.925 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
13. hnrpl 6412 3.128 - - 0.775 - - 0.713 0.759 - 0.881 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
14. tgif1 ENSDARG00000059337 4020 3.055 - - 0.777 - - 0.763 0.732 - 0.783 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
15. cdc25 cdc25 3913 2.905 - - 0.718 - - 0.715 0.736 0.736 -
16. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.671 - 0.989 - - - - 0.837 - 0.845 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
17. srsf11 ENSDARG00000098574 12801 2.661 - - - 0.905 - - 0.894 - 0.862 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
18. anp32b ENSDARG00000023330 25013 2.66 - - - 0.928 0.995 - 0.737 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
19. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.623 0.903 - - - - - - 0.922 0.798 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
20. dda1 ENSDARG00000076074, ENSDARG00000109308 1993 2.62 - 0.992 - - - - 0.739 0.889 - DET1 and DDB1 associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2137]
21. ppp1cab ENSDARG00000071566 4350 2.568 0.867 0.992 - - - - 0.709 - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
22. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.514 0.874 - 0.757 0.883 - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
23. smc1al ENSDARG00000058203 8838 2.508 - - 0.820 - - - 0.798 - 0.890 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
24. whsc1l1 8544 2.502 - - - - - 0.791 0.815 - 0.896 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
25. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 2.483 - - - 0.825 - - - 0.896 0.762 solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
26. HNRNPAB HNRNPAB 22267 2.481 - - 0.702 - - - 0.834 - 0.945
27. hnrnpub ENSDARG00000004735 16496 2.479 - - - - - 0.768 0.815 - 0.896 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
28. lypla2 ENSDARG00000053656 8971 2.477 - - - - - 0.814 0.848 - 0.815 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
29. dkc1 ENSDARG00000016484 7088 2.467 0.842 - - 0.924 - - - - 0.701 dyskeratosis congenita 1, dyskerin [Source:ZFIN;Acc:ZDB-GENE-031118-120]
30. kdm1a ENSDARG00000060679 6152 2.466 - - 0.793 - - - 0.800 0.873 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
31. hmgb1b ENSDARG00000030479 10398 2.459 - - 0.866 - - 0.819 0.774 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
32. tmpob ENSDARG00000022978 8121 2.455 - - 0.877 - - - 0.703 - 0.875 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
33. nfya ENSDARG00000042004, ENSDARG00000114231 6606 2.446 0.891 - 0.850 - - - - 0.705 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
34. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.446 - - 0.799 - - - - 0.739 0.908 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
35. MKI67 ENSDARG00000091150 11038 2.446 - 0.849 - - - 0.748 - - 0.849 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
36. ezh2 ENSDARG00000010571 3273 2.442 - - 0.859 - - - 0.758 - 0.825 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
37. fgfr2 ENSDARG00000058115 6743 2.442 0.807 - 0.783 0.852 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
38. rsl24d1 ENSDARG00000040439 13537 2.442 - 0.867 - 0.836 - 0.739 - - - ribosomal L24 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1925]
39. mxd3 ENSDARG00000098350 3040 2.441 - - - 0.844 - - - 0.841 0.756 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
40. prmt1 ENSDARG00000010246 11311 2.44 - - 0.833 - - - 0.716 0.891 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
41. sin3b ENSDARG00000062472 2025 2.436 - - 0.768 - - - 0.882 - 0.786 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
42. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.432 - - 0.847 - - - 0.724 0.861 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
43. fam60al 2846 2.429 - - 0.740 - - - 0.857 - 0.832 family with sequence similarity 60, member A, like
44. kif22 ENSDARG00000102624 3694 2.424 - - 0.789 - - - 0.813 - 0.822 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
45. ddx39ab ENSDARG00000015111 11619 2.414 - - - - - 0.730 0.835 - 0.849 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
46. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.388 - - - - - - 0.791 0.857 0.740 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
47. h2afva ENSDARG00000068820 16427 2.384 - - - - - 0.776 0.883 - 0.725 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
48. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.379 - - 0.780 - - - - 0.816 0.783 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
49. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.372 - - 0.832 - - - 0.771 - 0.769 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
50. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 2.349 - - 0.750 - - - 0.749 0.850 - erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
51. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.348 - - - - - - 0.790 0.761 0.797 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
52. fen1 ENSDARG00000011404 3358 2.34 - - 0.850 - - - 0.753 - 0.737 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
53. esco2 ENSDARG00000014685 1971 2.339 - - - - - - 0.789 0.840 0.710 establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
54. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 2.337 0.872 - - - - - 0.715 - 0.750 LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
55. gnao1a ENSDARG00000016676 8184 2.336 - - - 0.856 - - 0.702 - 0.778 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
56. zgc:86598 ENSDARG00000014222 3664 2.335 0.875 - 0.723 - - - 0.737 - - zgc:86598 [Source:ZFIN;Acc:ZDB-GENE-040625-181]
57. usp7 ENSDARG00000073710 7017 2.333 - - - - - 0.769 0.813 - 0.751 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
58. mcm4 ENSDARG00000040041 7971 2.332 - - - 0.876 - - 0.719 0.737 - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
59. ubap2 ubap2 4167 2.331 - - - 0.872 - - - 0.700 0.759
60. rbbp6 ENSDARG00000037919 4813 2.327 - - 0.735 0.882 - - - - 0.710 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
61. actr1 ENSDARG00000011611 3879 2.325 - - - - - 0.794 0.731 0.800 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
62. stmn1a ENSDARG00000004169 21169 2.317 - - 0.827 - - - 0.741 - 0.749 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
63. tox ENSDARG00000032317 9126 2.311 - - - - - 0.752 0.741 - 0.818 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
64. zgc:110540 ENSDARG00000054929 2154 2.303 - - - 0.862 - - 0.706 - 0.735 zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
65. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.303 - - 0.778 - - 0.702 0.823 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
66. marcksa ENSDARG00000004049 2518 2.298 - - - - - 0.717 0.737 - 0.844 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
67. cspg5a ENSDARG00000069981 1699 2.283 - - 0.746 - - - - 0.803 0.734 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
68. rtca ENSDARG00000002215 3558 2.28 - - 0.748 - - - 0.730 - 0.802 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
69. ANKRD11 ENSDARG00000051886 10024 2.28 - - 0.709 0.857 - 0.714 - - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
70. ahctf1 ENSDARG00000077530 2315 2.278 - - - - - - 0.836 0.713 0.729 AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
71. tcea1 ENSDARG00000003531 2912 2.275 - - 0.783 - - - - 0.703 0.789 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
72. CABZ01028287.1 CABZ01028287.1 626 2.268 - - - - - 0.781 - 0.763 0.724
73. znf865 ENSDARG00000036698 15532 2.26 - - - - - 0.704 0.795 - 0.761 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
74. apex1 ENSDARG00000045843 6345 2.25 - - 0.795 - - - 0.740 0.715 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
75. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 2.246 - - 0.741 - - - 0.737 - 0.768 structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
76. srsf6b ENSDARG00000016783 9926 2.245 - - - - - 0.723 0.762 0.760 - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
77. ctnnd2b ENSDARG00000003779 964 2.239 - - 0.726 - - 0.735 - 0.778 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
78. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.235 - - 0.729 - - - 0.731 - 0.775 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
79. dnaja2l ENSDARG00000010745 2367 2.231 - - 0.708 - - - 0.736 - 0.787 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
80. nup50 ENSDARG00000017454 4425 2.227 - - 0.742 - - - 0.766 0.719 - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
81. CABZ01111990.1 CABZ01111990.1 4374 2.223 - - 0.728 - - 0.752 - - 0.743
82. bri3bp ENSDARG00000010108 6295 2.208 - - - - - 0.710 0.764 - 0.734 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
83. si:ch73-46j18.5 ENSDARG00000092467 6002 2.204 - - 0.730 - - - 0.717 - 0.757 si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
84. anp32a ENSDARG00000006487 28249 2.194 - - - 0.715 - - 0.711 - 0.768 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
85. snrnp70 ENSDARG00000077126 5921 2.19 - - 0.709 - - - - 0.754 0.727 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
86. wdr33 ENSDARG00000018272 4076 2.174 - - 0.753 - - - - 0.709 0.712 WD repeat domain 33 [Source:ZFIN;Acc:ZDB-GENE-040924-3]
87. pou3f3a ENSDARG00000042032 2835 2.168 - - - - - 0.708 0.702 - 0.758 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
88. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 2.161 - - 0.738 - - - 0.702 - 0.721 max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
89. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.152 - - - - - 0.724 0.723 - 0.705 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
90. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.986 - 0.988 - - 0.998 - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
91. ncalda ENSDARG00000070688 5069 1.879 - - - 0.880 0.999 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
92. taf9 ENSDARG00000077870 6992 1.872 - - - - 0.999 - 0.873 - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
93. psmc2 ENSDARG00000020101 8095 1.863 0.904 0.959 - - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
94. srsf5b ENSDARG00000027734 6996 1.854 0.863 0.991 - - - - - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
95. tuba1c ENSDARG00000055216 8384 1.84 - 0.990 - - - - - - 0.850 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
96. phgdh ENSDARG00000001873 8325 1.815 0.816 - - - 0.999 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
97. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.812 - 0.993 - - - - 0.819 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
98. nova1 ENSDARG00000020178 4129 1.802 0.912 - - - - - - 0.890 - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
99. hnrnpm ENSDARG00000061735 19428 1.795 0.898 - - - - - - - 0.897 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
100. sh3bp4a ENSDARG00000020000 1049 1.792 - 0.988 - - - - - 0.804 - SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]

There are 1865 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA