Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rb1

Gene Name Gene ID Reads Annotation
rb1 ENSDARG00000006782 1445 retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]










Genes with expression patterns similar to rb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rb1 ENSDARG00000006782 1445 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
2. QPCT ENSDARG00000089717 1383 2.537 - 0.789 - - - 0.997 - - 0.751 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
3. fam129ba ENSDARG00000062970 1578 2.454 - 0.780 - - - 0.968 - 0.706 - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
4. tjp1a ENSDARG00000077506 2658 1.991 - - - 0.993 - 0.998 - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
5. pfdn1 ENSDARG00000014536 6969 1.971 - - - 0.984 - 0.987 - - - prefoldin subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050306-50]
6. dnttip2 ENSDARG00000057648 2381 1.934 - - - 0.995 - - - 0.939 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
7. srsf11 ENSDARG00000098574 12801 1.876 - - - 0.908 - 0.968 - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
8. znrd1 ENSDARG00000036070 684 1.848 - 0.925 - - - - - 0.923 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
9. tex2 ENSDARG00000078186 2467 1.845 - - - - - 0.998 - 0.847 - testis expressed 2 [Source:ZFIN;Acc:ZDB-GENE-070615-7]
10. GOLM1 GOLM1 1845 1.831 - 0.834 - - - 0.997 - - -
11. sh3gl3a ENSDARG00000013360 3602 1.822 - - - 0.995 - - - 0.827 - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
12. chsy3 ENSDARG00000069472 271 1.822 - 0.917 - - - - - 0.905 - chondroitin sulfate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030616-4]
13. ZNF628 1104 1.81 - 0.929 - - - - - 0.881 - zinc finger protein 628, transcript variant X3
14. immt ENSDARG00000102874 3435 1.8 - 0.818 - 0.982 - - - - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
15. emc3 ENSDARG00000020607 3406 1.794 0.808 - - 0.986 - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
16. PPP1R8 PPP1R8 1897 1.793 - - - 0.998 - - - 0.795 -
17. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.768 - 0.771 - 0.997 - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
18. zic5 ENSDARG00000016022 1034 1.762 - 0.907 - - - - - 0.855 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
19. vash2 ENSDARG00000007774 2537 1.752 - - - - - 0.996 - 0.756 - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
20. pop5 ENSDARG00000053452 1347 1.751 - 0.879 - - - - - 0.872 - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
21. nup98 ENSDARG00000074955 3998 1.733 - - - 0.991 - - - 0.742 - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
22. C19H18orf21_1 C19H18orf21_1 1657 1.727 - 0.734 - - - 0.993 - - -
23. znf148 ENSDARG00000055106 528 1.726 0.821 - - - - - - 0.905 - zinc finger protein 148 [Source:ZFIN;Acc:ZDB-GENE-030131-8769]
24. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.717 - - - - - - - 0.874 0.843 signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
25. mxd3 ENSDARG00000098350 3040 1.716 - - - 0.985 - - - 0.731 - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
26. zbtb7a ENSDARG00000039899 577 1.715 - 0.948 - - - - - - 0.767 zinc finger and BTB domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-050208-583]
27. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 1.711 - - - 0.992 - - - 0.719 - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
28. fgfr2 ENSDARG00000058115 6743 1.705 - - 0.712 0.993 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
29. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.7 - 0.868 - - - - - 0.832 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
30. gclc ENSDARG00000013095 2146 1.698 - - - - - 0.994 - 0.704 - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
31. qdpra ENSDARG00000040190 4064 1.695 - - - - - 0.876 - 0.819 - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
32. snx1a ENSDARG00000071031 3975 1.685 - 0.770 - - - 0.915 - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
33. clint1a ENSDARG00000025535 4965 1.685 - - - - - 0.978 - - 0.707 clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
34. si:ch211-120e1.6 si:ch211-120e1.6 292 1.683 0.765 0.918 - - - - - - -
35. si:ch211-132g1.3 ENSDARG00000089477 769 1.682 - 0.912 - - - - - - 0.770 si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
36. prc1b ENSDARG00000005993 780 1.681 - 0.907 - - - - - 0.774 - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
37. creld2 ENSDARG00000029071, ENSDARG00000116264 333 1.679 - 0.946 - - - - - - 0.733 cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
38. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 1.669 - 0.931 - - - - - - 0.738 non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
39. NUDT12 ENSDARG00000100813 378 1.656 - - - - - - - 0.891 0.765 nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
40. rbb4 rbb4 15541 1.652 - - - 0.825 - - - 0.827 -
41. TRIM35_10 TRIM35_10 484 1.65 - 0.950 - - - - - - 0.700
42. CR352229.2 CR352229.2 784 1.647 - - - - - - - 0.897 0.750
43. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.639 - - - - - - - 0.937 0.702 zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
44. crkl ENSDARG00000028699 2966 1.638 - 0.803 - - - - - 0.835 - v-crk avian sarcoma virus CT10 oncogene homolog-like [Source:ZFIN;Acc:ZDB-GENE-040426-2951]
45. mdm4 ENSDARG00000057513 1954 1.631 - 0.803 - - - - - 0.828 - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
46. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.628 - 0.856 - - - - - 0.772 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
47. capn7 ENSDARG00000102987 386 1.601 - - - - - - 0.703 0.898 - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
48. plcg1 ENSDARG00000038442 5324 1.598 - 0.726 - - - - - 0.872 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
49. LLPH ENSDARG00000055360 1456 1.593 - 0.841 - - - - - 0.752 - LLP homolog, long-term synaptic facilitation factor [Source:ZFIN;Acc:ZDB-GENE-051030-30]
50. mcm4 ENSDARG00000040041 7971 1.592 - - - 0.843 - - - 0.749 - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
51. eprs ENSDARG00000060494 4729 1.58 - 0.752 - - - - - 0.828 - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
52. CR847925.1 CR847925.1 835 1.579 0.711 - - - - - - 0.868 -
53. dixdc1a ENSDARG00000025302 716 1.573 - - - - - - - 0.835 0.738 DIX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030721-2]
54. setdb1a ENSDARG00000041243 1952 1.572 0.743 0.829 - - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
55. rfc2 ENSDARG00000014274 1533 1.568 - - - - 0.708 - - 0.860 - replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
56. bub1bb ENSDARG00000074927 1667 1.553 - 0.746 - - - - - 0.807 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
57. INHBE INHBE 95 1.54 0.727 0.813 - - - - - - -
58. CT955967.1 ENSDARG00000099956 2885 1.537 - - - - - - - 0.761 0.776
59. C1H4orf27 C1H4orf27 1961 1.524 - - 0.709 - - - - 0.815 -
60. SRR SRR 544 1.513 0.725 - - - - - - - 0.788
61. CCDC132 CCDC132 267 1.509 0.747 - - - - - - - 0.762
62. ttc13 ENSDARG00000063242 1360 1.468 - 0.714 - - - - - - 0.754 tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
63. ddx18 ENSDARG00000030789 3631 1.422 - 0.711 - - - - - 0.711 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685]
64. cry1a cry1a 738 1.422 - 0.712 - - - - - - 0.710
65. nutf2l ENSDARG00000014499 3927 1.418 - - 0.706 - 0.712 - - - - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
66. CABZ01041804.1 CABZ01041804.1 312 0.999 - - - - - 0.999 - - -
67. itpk1 itpk1 425 0.999 - - - - - 0.999 - - -
68. SATB1 SATB1 928 0.999 - - - - - 0.999 - - -
69. CU929119.2 CU929119.2 859 0.999 - - - - - 0.999 - - -
70. BCR ENSDARG00000079286 389 0.999 - - - - - 0.999 - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
71. si:ch211-155e24.3 ENSDARG00000105127 972 0.999 - - - 0.999 - - - - - si:ch211-155e24.3 [Source:ZFIN;Acc:ZDB-GENE-070912-116]
72. crb3b ENSDARG00000068182 683 0.999 - - - - - 0.999 - - - crumbs homolog 3b [Source:ZFIN;Acc:ZDB-GENE-060610-3]
73. PDZD8 ENSDARG00000088699 844 0.999 - - - - - 0.999 - - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
74. mfsd10 ENSDARG00000086786 304 0.999 - - - - - 0.999 - - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
75. KCNV1 ENSDARG00000070092 301 0.999 - - - - - 0.999 - - - potassium voltage-gated channel modifier subfamily V member 1 [Source:HGNC Symbol;Acc:HGNC:18861]
76. phlda3 ENSDARG00000037804 1116 0.999 - - - - - 0.999 - - - pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
77. birc2 ENSDARG00000044619, ENSDARG00000117094 1376 0.999 - - - - - 0.999 - - - baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]
78. cul3a ENSDARG00000038967 6155 0.999 - - - - - 0.999 - - - cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
79. RPAP3 ENSDARG00000087962 946 0.999 - - - - - 0.999 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
80. zcchc8 ENSDARG00000034982 3406 0.999 - - - - - 0.999 - - - zinc finger, CCHC domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060526-6]
81. sox21b ENSDARG00000008540 1460 0.999 - - - - - 0.999 - - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
82. cd99 ENSDARG00000051975 3824 0.999 - - - - - 0.999 - - - CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]
83. CHST15 ENSDARG00000074527 210 0.999 - - - - - 0.999 - - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
84. aqr ENSDARG00000016775 1581 0.999 - - - - - 0.999 - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
85. megf11 ENSDARG00000062686 230 0.999 - - - - - 0.999 - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
86. ZNF70_2 ZNF70_2 1866 0.999 - - - - - 0.999 - - -
87. bag1 ENSDARG00000020895 1660 0.999 - - - - - 0.999 - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
88. phf6 ENSDARG00000004046, ENSDARG00000115639 925 0.999 - - - 0.999 - - - - - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
89. tmem223 ENSDARG00000069494 1528 0.999 - - - - - 0.999 - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
90. PHLDB1 PHLDB1 3821 0.999 - - - - - 0.999 - - -
91. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 0.999 - - - - - 0.999 - - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
92. zgc:172120 ENSDARG00000069199 278 0.999 - - - - - 0.999 - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
93. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 0.999 - - - - - 0.999 - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
94. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 0.999 - - - - - 0.999 - - - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
95. ptrh1 ENSDARG00000098206, ENSDARG00000110279 1001 0.999 - - - - - 0.999 - - - peptidyl-tRNA hydrolase 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050306-33]
96. unc5b ENSDARG00000033327 3432 0.998 - - - 0.998 - - - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
97. ccdc102a ENSDARG00000003872 791 0.998 - - - 0.998 - - - - - coiled-coil domain containing 102A [Source:ZFIN;Acc:ZDB-GENE-030131-4044]
98. tgfb1b ENSDARG00000034895 608 0.998 - - - 0.998 - - - - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
99. znf385b ENSDARG00000006065 817 0.998 - - - - - 0.998 - - - zinc finger protein 385B [Source:ZFIN;Acc:ZDB-GENE-030616-154]
100. ano10b ENSDARG00000018159 535 0.998 - - - - - 0.998 - - - anoctamin 10b [Source:ZFIN;Acc:ZDB-GENE-061013-169]

There are 1580 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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