Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for raver2

Gene Name Gene ID Reads Annotation
raver2 ENSDARG00000075034 290 ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]










Genes with expression patterns similar to raver2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. raver2 ENSDARG00000075034 290 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]
2. CABZ01079241.1 ENSDARG00000098424 88 1.749 - 0.832 - - - - 0.917 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
3. wu:fd44f01 wu:fd44f01 391 1.725 - 0.936 - - - - 0.789 - -
4. ppa1a ENSDARG00000099933 31 1.7 - 0.868 - - - 0.832 - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
5. atxn10 ENSDARG00000008439 156 1.693 - 0.863 - - - - 0.830 - - ataxin 10 [Source:ZFIN;Acc:ZDB-GENE-060503-180]
6. sgsm3 ENSDARG00000019038 352 1.688 - 0.902 - - - - 0.786 - - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
7. GPR158 GPR158 64 1.661 - - - - - 0.780 0.881 - -
8. CR478286.1_1 CR478286.1_1 306 1.634 - 0.854 - - - - 0.780 - -
9. igsf21a ENSDARG00000031049 165 1.587 - 0.863 - - - - 0.724 - - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
10. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1.561 - 0.849 - - - 0.712 - - - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
11. fam105ba_1 fam105ba_1 484 1.54 - - - - - 0.733 0.807 - -
12. ptdss1 ptdss1 1143 1.527 - 0.773 - - - - 0.754 - -
13. si:ch211-148l7.4 ENSDARG00000094469 221 1.51 - 0.759 - - - - 0.751 - - si:ch211-148l7.4 [Source:ZFIN;Acc:ZDB-GENE-090313-38]
14. dkk2 ENSDARG00000076420 553 1.505 - 0.793 - - - 0.712 - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
15. sh3bp5a ENSDARG00000100529 642 1.485 - 0.736 - - - - 0.749 - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
16. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 1.478 - 0.733 - - - - 0.745 - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
17. USP38 ENSDARG00000075798 285 1.435 - - - - - 0.726 0.709 - - ubiquitin specific peptidase 38 [Source:ZFIN;Acc:ZDB-GENE-101007-2]
18. BAIAP2 BAIAP2 88 1.426 - 0.704 - - - 0.722 - - -
19. FAM117B FAM117B 225 1.418 - - - 0.700 - 0.718 - - -
20. kcnk10b ENSDARG00000045956 43 0.978 - - - - - - 0.978 - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
21. arhgef12b ENSDARG00000100913 1358 0.971 - - - - - - 0.971 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
22. HHIPL2 ENSDARG00000060008 162 0.966 - - - - - - 0.966 - - HHIP-like 2 [Source:ZFIN;Acc:ZDB-GENE-131120-145]
23. sirt3 ENSDARG00000035819 101 0.96 - - - - - - 0.960 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
24. CABZ01112521.1 CABZ01112521.1 83 0.957 - - - - - - 0.957 - -
25. nlgn4a 102 0.957 - - - - - - 0.957 - - neuroligin 4a, transcript variant X1
26. FAM149B1 ENSDARG00000061215 273 0.955 - 0.955 - - - - - - - family with sequence similarity 149, member B1 [Source:ZFIN;Acc:ZDB-GENE-070112-2102]
27. cadpsa ENSDARG00000043661 160 0.951 - - - - - - 0.951 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
28. fosb ENSDARG00000055751 170 0.949 - - - - - - 0.949 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
29. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 0.949 - - - - - - 0.949 - -
30. gabra1 ENSDARG00000068989 581 0.945 - - - - - - 0.945 - - gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-061013-194]
31. zbtb14 ENSDARG00000098273 36 0.943 - - - - - - 0.943 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
32. si:rp71-36a1.5_1 ENSDARG00000077252, ENSDARG00000090882 93 0.941 - - - - - - 0.941 - - si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
33. gfm2 ENSDARG00000005561 302 0.94 - - - - - - 0.940 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
34. ephx1 ENSDARG00000042854 161 0.94 - - - - - - 0.940 - - epoxide hydrolase 1, microsomal (xenobiotic) [Source:ZFIN;Acc:ZDB-GENE-040426-913]
35. megf11 ENSDARG00000062686 230 0.939 - 0.939 - - - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
36. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.938 - 0.938 - - - - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
37. otx5 ENSDARG00000043483 282 0.938 - - - - - - 0.938 - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
38. HERC4 ENSDARG00000059936 369 0.935 - - - - - - 0.935 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
39. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 0.935 - - - - - - 0.935 - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
40. PEG3_11 PEG3_11 167 0.933 - 0.933 - - - - - - -
41. lad1 ENSDARG00000022698 127 0.932 - 0.932 - - - - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
42. si:zfos-364h11.1 99 0.931 - - - - - - 0.931 - - si:zfos-364h11.1, transcript variant X4
43. smyd4 ENSDARG00000060983 106 0.928 - 0.928 - - - - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
44. CCDC34 CCDC34 313 0.928 - - - - - - 0.928 - -
45. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.928 - - - - - - 0.928 - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
46. chac2 ENSDARG00000055078 86 0.928 - 0.928 - - - - - - - ChaC, cation transport regulator homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-050706-146]
47. SNX20 ENSDARG00000045554 77 0.928 - 0.928 - - - - - - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
48. AP5B1 ENSDARG00000078805 62 0.927 - - - - - - 0.927 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
49. C5H9orf117 C5H9orf117 88 0.926 - 0.926 - - - - - - -
50. rasl12 ENSDARG00000002701 66 0.926 - - - - - - 0.926 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
51. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.926 - - - - - - 0.926 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
52. cx28.8 ENSDARG00000071042 62 0.925 - 0.925 - - - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
53. BX901889.1 ENSDARG00000077036 3 0.925 - 0.925 - - - - - - - trac-like [Source:NCBI gene;Acc:100331689]
54. PRRT4 ENSDARG00000088343 36 0.925 - - - - - - 0.925 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
55. OCEL1 OCEL1 27 0.925 - 0.925 - - - - - - -
56. si:dkey-150k17.3 33 0.925 - 0.925 - - - - - - - si:dkey-150k17.3
57. hsdl1 ENSDARG00000041736 171 0.923 - 0.923 - - - - - - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
58. PKP3 PKP3 391 0.92 - 0.920 - - - - - - -
59. lppr5b lppr5b 23 0.919 - - - - - - 0.919 - -
60. PRKCA_1 ENSDARG00000099841 12 0.919 - - - - - - 0.919 - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
61. c6_1 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 284 0.919 - 0.919 - - - - - - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
62. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 0.919 - - - - - - 0.919 - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
63. wu:fi34b01 38 0.919 - - - - - - 0.919 - - wu:fi34b01
64. CABZ01054405.1 CABZ01054405.1 115 0.919 - - - - - - 0.919 - -
65. dlx6a ENSDARG00000042291 185 0.919 - - - - - - 0.919 - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
66. HEATR2 HEATR2 6 0.919 - - - - - - 0.919 - -
67. ins ENSDARG00000035350, ENSDARG00000116735 317 0.919 - - - - - - 0.919 - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
68. dapp1 ENSDARG00000039535 23 0.919 - - - - - - 0.919 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
69. C24H7orf10 C24H7orf10 7 0.919 - - - - - - 0.919 - -
70. rad51c ENSDARG00000068919 98 0.919 - - - - - - 0.919 - - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
71. FP085412.2 FP085412.2 5 0.919 - - - - - - 0.919 - -
72. BX324215.3 BX324215.3 12 0.919 - - - - - - 0.919 - -
73. si:dkeyp-100a1.6 ENSDARG00000092141 33 0.919 - - - - - - 0.919 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
74. pla1a ENSDARG00000102176, ENSDARG00000109274 29 0.919 - - - - - - 0.919 - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
75. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.919 - - - - - - 0.919 - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
76. HIST1H4J HIST1H4J 31 0.919 - - - - - - 0.919 - -
77. CU570684.5 CU570684.5 55 0.918 - - - - - - 0.918 - -
78. cbln2a ENSDARG00000074601 12 0.918 - - - - - - 0.918 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
79. si:dkey-222l20.1 si:dkey-222l20.1 375 0.918 - - - - - - 0.918 - -
80. ptpdc1 ptpdc1 281 0.917 - 0.917 - - - - - - -
81. NECAB3 ENSDARG00000074794 379 0.917 - 0.917 - - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
82. drd4a ENSDARG00000038363 82 0.916 - - - - - - 0.916 - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
83. BX936303.1 ENSDARG00000103105 26 0.916 - - - - - - 0.916 - -
84. slc5a11 ENSDARG00000019932 160 0.916 - - - - - - 0.916 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
85. olfml2bb ENSDARG00000021480 256 0.916 - - - - - - 0.916 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
86. dgat1b ENSDARG00000054914 119 0.915 - - - - - - 0.915 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
87. mrap ENSDARG00000091992 9 0.915 - - - - - - 0.915 - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
88. thoc3 ENSDARG00000056517 909 0.914 - 0.914 - - - - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
89. eno1b ENSDARG00000013750 63 0.913 - - - - - - 0.913 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
90. cyp27a1.4 ENSDARG00000055159 47 0.913 - - - - - - 0.913 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
91. PTDSS1 PTDSS1 186 0.912 - 0.912 - - - - - - -
92. si:dkey-75a21.2 ENSDARG00000093188 258 0.912 - 0.912 - - - - - - - si:dkey-75a21.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6823]
93. ankrd39 ENSDARG00000041350 73 0.912 - 0.912 - - - - - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
94. zgc:92218 zgc:92218 64 0.91 - 0.910 - - - - - - -
95. FHOD3 FHOD3 422 0.91 - - - - - - 0.910 - -
96. lrrc24 ENSDARG00000101704 224 0.908 - - - - - - 0.908 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
97. DFNA5 DFNA5 201 0.908 - - - - - - 0.908 - -
98. MAGI3 MAGI3 114 0.908 - - - - - - 0.908 - -
99. rtkn2 rtkn2 1092 0.908 - 0.908 - - - - - - -
100. hs3st3l ENSDARG00000059903 184 0.908 - - - - - - 0.908 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]

There are 845 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA