Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for raver1

Gene Name Gene ID Reads Annotation
raver1 ENSDARG00000052617 1189 ribonucleoprotein, PTB-binding 1 [Source:ZFIN;Acc:ZDB-GENE-050522-99]










Genes with expression patterns similar to raver1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. raver1 ENSDARG00000052617 1189 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ribonucleoprotein, PTB-binding 1 [Source:ZFIN;Acc:ZDB-GENE-050522-99]
2. rtca ENSDARG00000002215 3558 2.14 - 0.703 0.709 - - - - - 0.728 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
3. mcmbp ENSDARG00000055314 731 1.708 - 0.862 - - - - 0.846 - - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
4. cpsf5 cpsf5 1841 1.644 - 0.879 - - - - 0.765 - -
5. wu:fk48d07 wu:fk48d07 13245 1.56 - - - 0.814 - - - - 0.746
6. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 1.554 - - - - - - 0.822 - 0.732 MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
7. mex3b ENSDARG00000058369 1867 1.546 - - 0.760 - 0.786 - - - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
8. supt16h ENSDARG00000079949 4755 1.537 - 0.832 - - - - 0.705 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
9. rbmx ENSDARG00000014244 3445 1.518 - - - - - - 0.712 - 0.806 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
10. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.518 - - 0.757 - - - - - 0.761 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
11. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.517 0.799 - - - - - 0.718 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
12. ccdc93 ENSDARG00000040678 1131 1.513 - - - - - 0.716 0.797 - - coiled-coil domain containing 93 [Source:ZFIN;Acc:ZDB-GENE-060421-8315]
13. TMEM150A TMEM150A 975 1.512 - - - - - - 0.792 - 0.720
14. parp1 ENSDARG00000019529 6787 1.508 - - 0.726 - 0.782 - - - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
15. ptprna ENSDARG00000058646 1327 1.5 - - 0.713 0.787 - - - - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
16. CDCA7L CDCA7L 1365 1.499 - - 0.724 - 0.775 - - - -
17. anapc7 ENSDARG00000063005 1139 1.495 - - - - - 0.757 0.738 - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
18. fen1 ENSDARG00000011404 3358 1.49 - - 0.785 - - - 0.705 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
19. arid1ab ENSDARG00000101891 1722 1.489 - - 0.723 0.766 - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
20. tgif1 ENSDARG00000059337 4020 1.486 - 0.725 0.761 - - - - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
21. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.486 - 0.717 - - - - - - 0.769 caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
22. nudt3b ENSDARG00000042123 311 1.484 - 0.719 - - - - 0.765 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
23. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.482 - - - - - - 0.767 - 0.715 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
24. rbb4 rbb4 15541 1.481 - - 0.760 - - - - - 0.721
25. aatf ENSDARG00000025467, ENSDARG00000109548 796 1.475 0.769 0.706 - - - - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
26. txnl4a ENSDARG00000036190 2048 1.472 - 0.711 - - - - 0.761 - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
27. zc3h18 ENSDARG00000062506 1676 1.469 - - - - - 0.764 - 0.705 - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
28. ccnt1 ENSDARG00000017525 1888 1.466 - 0.752 0.714 - - - - - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
29. camlg ENSDARG00000100409 2157 1.466 - 0.706 - - - - - - 0.760 calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
30. smarca5 ENSDARG00000052348 15433 1.465 - 0.753 - - - - - - 0.712 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
31. rbm25 rbm25 3629 1.464 - - - - - - 0.707 - 0.757
32. kif15 ENSDARG00000012073 1936 1.456 - 0.719 - - 0.737 - - - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
33. kif22 ENSDARG00000102624 3694 1.456 - - 0.710 - - - - - 0.746 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
34. smc1al ENSDARG00000058203 8838 1.452 - - 0.727 - - - - - 0.725 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
35. hecw2a ENSDARG00000062447 132 1.452 0.709 - - - - - 0.743 - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2a [Source:ZFIN;Acc:ZDB-GENE-090311-22]
36. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.452 - 0.728 - - - - 0.724 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
37. RNASEH2C ENSDARG00000089637 1673 1.44 0.700 - - - - 0.740 - - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
38. fbxo5 ENSDARG00000039020 1284 1.439 - 0.713 - - - - - - 0.726 F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
39. ylpm1 ENSDARG00000043680 7676 1.439 - - 0.701 - - - 0.738 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
40. bcl2_1 bcl2_1 1185 1.439 - - - - - - 0.730 0.709 -
41. taf10 ENSDARG00000068641 3333 1.436 - - - - - 0.724 0.712 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
42. hdac1 ENSDARG00000015427 19804 1.433 - - 0.730 - - - - - 0.703 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
43. emc10 ENSDARG00000054793 2315 1.433 - - - - - - 0.719 0.714 - ER membrane protein complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9045]
44. ZNF281 ZNF281 1946 1.426 - - 0.714 - 0.712 - - - -
45. C21H17orf85 C21H17orf85 1167 1.423 - 0.714 - - - - - - 0.709
46. snrpd3l ENSDARG00000076283 7655 1.42 - - - - - - 0.705 - 0.715 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
47. zgc:63863 ENSDARG00000099753 210 0.883 0.883 - - - - - - - - zgc:63863 [Source:ZFIN;Acc:ZDB-GENE-040426-1278]
48. cept1a ENSDARG00000058716 1686 0.878 - - - - - 0.878 - - - choline/ethanolamine phosphotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-081105-47]
49. auts2 auts2 1538 0.86 - 0.860 - - - - - - -
50. C8H1orf222 C8H1orf222 36 0.86 - - - - - - 0.860 - -
51. nck1b ENSDARG00000075369 1596 0.851 - 0.851 - - - - - - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
52. mrps23 ENSDARG00000033973 2265 0.85 - 0.850 - - - - - - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
53. blzf1 ENSDARG00000011299 2568 0.849 - 0.849 - - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
54. snx27b ENSDARG00000016977 2768 0.847 - - - - - - 0.847 - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
55. ubxn7 ENSDARG00000009436 652 0.843 - - - - - - 0.843 - - UBX domain protein 7 [Source:ZFIN;Acc:ZDB-GENE-040704-8]
56. C9H2orf49 C9H2orf49 258 0.843 - - - - - - 0.843 - -
57. slc17a9a ENSDARG00000042954 36 0.842 - - - - - - 0.842 - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
58. tbl1xr1a ENSDARG00000058696 5439 0.842 - - - - - 0.842 - - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
59. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 0.838 - 0.838 - - - - - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
60. GRIK3 ENSDARG00000077715 178 0.835 - - - - - - 0.835 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
61. CCDC181 ENSDARG00000062021 77 0.835 - - - - - - 0.835 - - coiled-coil domain containing 181 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
62. MALSU1 MALSU1 1251 0.832 - 0.832 - - - - - - -
63. POLR2H ENSDARG00000038505 2031 0.832 - - - - - - 0.832 - - info polymerase (RNA) II (DNA directed) polypeptide H [Source:ZFIN;Acc:ZDB-GENE-050417-66]
64. slc25a32a ENSDARG00000089791 511 0.831 - - - - - - 0.831 - - solute carrier family 25 (mitochondrial folate carrier), member 32a [Source:ZFIN;Acc:ZDB-GENE-040426-758]
65. ZNF646 ENSDARG00000061424 1549 0.829 - - - - - - 0.829 - - zinc finger protein 646 [Source:ZFIN;Acc:ZDB-GENE-160627-3]
66. zgc:123010 ENSDARG00000039082 870 0.829 - - - - - 0.829 - - - zgc:123010 [Source:ZFIN;Acc:ZDB-GENE-051120-15]
67. brms1 ENSDARG00000051955 900 0.829 - - - - - - 0.829 - - BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
68. ext2 ENSDARG00000056648 1322 0.822 - 0.822 - - - - - - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
69. mob1bb ENSDARG00000012953 873 0.822 - 0.822 - - - - - - - MOB kinase activator 1Bb [Source:ZFIN;Acc:ZDB-GENE-050522-58]
70. taf6l ENSDARG00000079684 1408 0.821 - 0.821 - - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
71. gtf2f2a ENSDARG00000069910 1027 0.819 - - - - - - 0.819 - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
72. si:ch211-213a13.1 ENSDARG00000090600 381 0.819 - - - - - - 0.819 - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
73. cyb561d1 ENSDARG00000055295, ENSDARG00000114150 124 0.818 - - - - - - 0.818 - - cytochrome b561 family, member D1 [Source:ZFIN;Acc:ZDB-GENE-040912-157]
74. gtf2b ENSDARG00000103578 1571 0.816 - 0.816 - - - - - - - general transcription factor IIB [Source:ZFIN;Acc:ZDB-GENE-030131-3544]
75. ift80 ENSDARG00000038879 283 0.814 - - - - - - 0.814 - - intraflagellar transport 80 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-50]
76. cdk6 ENSDARG00000070228 1778 0.813 - - - - - - 0.813 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
77. dclre1b ENSDARG00000068833 359 0.811 - - - - - - 0.811 - - DNA cross-link repair 1B [Source:ZFIN;Acc:ZDB-GENE-061013-328]
78. appb ENSDARG00000055543, ENSDARG00000109552 4461 0.808 - 0.808 - - - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
79. slc35a4 ENSDARG00000062379 1088 0.806 - 0.806 - - - - - - - solute carrier family 35, member A4 [Source:ZFIN;Acc:ZDB-GENE-061103-595]
80. aldh18a1 ENSDARG00000099579 2185 0.806 - - - - - - - 0.806 - aldehyde dehydrogenase 18 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-5602]
81. gfm1 ENSDARG00000063624 523 0.806 - 0.806 - - - - - - - G elongation factor, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-061013-79]
82. ankrd10a ENSDARG00000037100 375 0.805 - - - - - - 0.805 - - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
83. foxk2 ENSDARG00000030583 2982 0.805 - - - - - - - - 0.805 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
84. brd2a ENSDARG00000022280 3481 0.804 - - - - - 0.804 - - - bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
85. fam60al 2846 0.803 - - - - 0.803 - - - - family with sequence similarity 60, member A, like
86. nup188 ENSDARG00000030022 2398 0.803 - 0.803 - - - - - - - nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
87. htatsf1 ENSDARG00000056649 2018 0.801 - - - - - - 0.801 - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
88. plagx ENSDARG00000036855 3768 0.8 - - 0.800 - - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
89. tmem176l.1 ENSDARG00000099491 860 0.8 - 0.800 - - - - - - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
90. CXXC5 CXXC5 1332 0.799 0.799 - - - - - - - -
91. mppe1 ENSDARG00000045416 340 0.799 - - - - - - 0.799 - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
92. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 0.799 - 0.799 - - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
93. ndc80 ENSDARG00000071694 1162 0.798 - 0.798 - - - - - - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
94. pfkpa ENSDARG00000028000 1206 0.797 - 0.797 - - - - - - - phosphofructokinase, platelet a [Source:ZFIN;Acc:ZDB-GENE-091112-22]
95. nusap1 ENSDARG00000002403 6953 0.796 - - - - 0.796 - - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
96. cenpe ENSDARG00000063385 4428 0.795 - - - - - - - - 0.795 centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
97. foxp1a ENSDARG00000004843 3961 0.795 - 0.795 - - - - - - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
98. zgc:113209 ENSDARG00000100294 176 0.795 - - - - - - 0.795 - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
99. SH3GLB1 SH3GLB1 2274 0.795 - - - - - 0.795 - - -
100. ZFYVE1 ENSDARG00000078652 631 0.795 - - - - - - - 0.795 - zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]

There are 607 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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