Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rasgef1ba

Gene Name Gene ID Reads Annotation
rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]










Genes with expression patterns similar to rasgef1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
2. CASKIN2_1 CASKIN2_1 2299 2.815 - - - - 0.911 0.987 - 0.917 -
3. CABZ01088039.1 CABZ01088039.1 2482 2.708 - - - - - 0.974 0.877 - 0.857
4. dnm1l ENSDARG00000015006 1729 2.669 - - - - - - 0.935 0.871 0.863 dynamin 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-1556]
5. acsf2 ENSDARG00000061201 4413 2.58 - 0.891 - - - - 0.860 - 0.829 acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
6. plat ENSDARG00000062707 491 2.575 0.793 - - - - - - 0.908 0.874 plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
7. cnot6 cnot6 7029 2.556 - 0.895 0.703 - - - - - 0.958
8. si:dkey-118j18.2 ENSDARG00000096457 5293 2.459 - - 0.733 - 0.847 - - - 0.879 si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
9. uhrf1 ENSDARG00000103409 3282 2.418 - - 0.753 0.715 - - 0.950 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
10. pes ENSDARG00000018902 3286 1.946 - - - - - 0.987 0.959 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
11. FAR2 FAR2 1459 1.92 - - - - - 0.988 0.932 - -
12. VPS37C ENSDARG00000031836 906 1.915 - - - - - 0.985 0.930 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
13. ide ENSDARG00000075570 4331 1.877 - - - - 0.892 0.985 - - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
14. psmb4 ENSDARG00000054696 8100 1.876 - 0.892 - - - 0.984 - - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
15. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.861 - - - - - 0.958 0.903 - - Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
16. hoxa3a ENSDARG00000103862 2239 1.854 - - - - - 0.975 - 0.879 - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
17. mboat2a ENSDARG00000031845 1255 1.848 - - - - 0.865 0.983 - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
18. wu:fc51f04 wu:fc51f04 7074 1.848 - - - - - 0.981 0.867 - -
19. rabggtb ENSDARG00000068587 1935 1.846 - - - - - - 0.954 0.892 - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
20. sp1 ENSDARG00000088347 1697 1.845 - - - - - - 0.897 0.948 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
21. cdkn2aipnl ENSDARG00000053395 5107 1.844 - - - - 0.902 - 0.942 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
22. nfe2l2a ENSDARG00000042824 1707 1.844 - - - - - 0.978 - 0.866 - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
23. twf1a ENSDARG00000115712 3465 1.841 - - - - - 0.983 - - 0.858 twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
24. cdc42 ENSDARG00000044573 11795 1.836 - - - - - 0.944 0.892 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
25. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.835 - - - - 0.883 - 0.952 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
26. fbp1a ENSDARG00000021366 1778 1.833 - - - - - - 0.897 - 0.936 fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
27. dyrk1b ENSDARG00000070187 2777 1.831 - 0.895 - - - - 0.936 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
28. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 1.83 - - - - - - 0.931 0.899 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
29. NUAK1_1 NUAK1_1 1782 1.83 - 0.898 - - - - 0.932 - -
30. cadm1a ENSDARG00000031075 2484 1.822 - - - - - - 0.960 0.862 - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
31. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1.822 - - - - 0.893 - 0.929 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
32. decr1 ENSDARG00000003869 1344 1.821 - 0.898 - - - - 0.923 - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
33. nt5dc2 ENSDARG00000059646 3878 1.819 - 0.991 - - 0.828 - - - - 5'-nucleotidase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-17]
34. PROSER1 ENSDARG00000086302 1935 1.816 - - - - - 0.990 - 0.826 - proline and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-111003-1]
35. zgc:161969 ENSDARG00000041359 898 1.809 - - - - 0.880 - 0.929 - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
36. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.808 - - - - - 0.979 0.829 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
37. serpinf1 ENSDARG00000069048 2083 1.807 - - - - - 0.980 - - 0.827 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
38. actr10 ENSDARG00000038432 1598 1.802 - - - - - - 0.943 - 0.859 ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
39. mrpl27 ENSDARG00000032985 2158 1.797 - - - - 0.875 - 0.922 - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
40. mrps7 ENSDARG00000101622 889 1.796 - - - - - - 0.941 0.855 - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
41. eif2a ENSDARG00000101061 3800 1.795 - 0.853 - - - - 0.942 - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
42. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.795 - 0.897 - - - - - 0.898 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
43. arpc4 ENSDARG00000054063 6150 1.795 - 0.977 - - 0.818 - - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
44. plekhh1 ENSDARG00000053835 2123 1.791 - - - - - - 0.942 0.849 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
45. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.79 - - - - 0.831 - 0.959 - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
46. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.789 - - - - - - 0.956 0.833 - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
47. FAM110D FAM110D 3632 1.784 - - - - - - 0.912 - 0.872
48. CABZ01028296.1 CABZ01028296.1 6203 1.782 - 0.989 0.793 - - - - - -
49. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.782 - - - - - 0.982 0.800 - - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
50. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.78 - - - - 0.793 0.987 - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
51. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.777 - - - - - 0.930 - 0.847 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
52. mbd1 mbd1 1309 1.773 - - - - 0.905 - - - 0.868
53. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.773 - - - - - 0.988 0.785 - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
54. arfrp1 ENSDARG00000057857 2840 1.767 - - - - 0.903 - - - 0.864 ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
55. lrrtm1 ENSDARG00000052713 1041 1.765 - - - - - - - 0.896 0.869 leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
56. mapta ENSDARG00000089314 2038 1.764 - - - - - - 0.945 - 0.819 microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
57. chst11 ENSDARG00000034375 2701 1.757 - - - - 0.814 - 0.943 - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
58. ppp1cb ENSDARG00000044153 4748 1.748 - - - - 0.898 - 0.850 - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
59. znf706 ENSDARG00000056307 12518 1.741 - 0.864 - - - - - 0.877 - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
60. ep300b ENSDARG00000061108 5173 1.741 - - - - 0.822 - - 0.919 - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
61. mrpl12 ENSDARG00000038768 5539 1.741 - - - - 0.816 - 0.925 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
62. sdprb sdprb 13647 1.736 - 0.922 - - 0.814 - - - -
63. golga7 ENSDARG00000057676 4691 1.735 - - - - 0.886 - - 0.849 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
64. sdpra sdpra 4594 1.734 - - - - - - 0.840 - 0.894
65. sf3b4 ENSDARG00000018574 7470 1.734 - - - - - 0.993 0.741 - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
66. ak2 ENSDARG00000005926 7598 1.732 - - - - 0.868 - 0.864 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
67. aldh18a1 ENSDARG00000099579 2185 1.73 - - - - 0.936 - - - 0.794 aldehyde dehydrogenase 18 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-5602]
68. CITED1 ENSDARG00000077769 692 1.725 - - - - - - - 0.857 0.868 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
69. PTS ENSDARG00000045269 2185 1.718 - - - - - - 0.942 0.776 - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
70. sirt2 ENSDARG00000011488 5389 1.716 - - - - 0.902 - - - 0.814 sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
71. sp9 ENSDARG00000099374 2266 1.716 - - - - - - 0.865 - 0.851 sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
72. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 1.714 - - - - - - 0.917 0.797 - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
73. dusp11 ENSDARG00000038156 2490 1.71 - - - - 0.900 - - 0.810 - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
74. col14a1a ENSDARG00000005762 4778 1.709 - - - - 0.796 - 0.913 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
75. mapk6 ENSDARG00000032103 6422 1.709 - - - - 0.875 - - 0.834 - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
76. PDZD8 ENSDARG00000088699 844 1.707 0.774 - - - - - 0.933 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
77. cald1l cald1l 4115 1.706 - - - - - - - 0.764 0.942
78. yipf1 ENSDARG00000014474 542 1.706 0.720 - - - - 0.986 - - - Yip1 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040822-35]
79. zgc:63587 ENSDARG00000017140 8399 1.704 - - - - - 0.806 0.898 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
80. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.697 - - 0.768 - - - 0.929 - -
81. prp19 prp19 4804 1.695 - - - - - - - 0.916 0.779
82. fbl ENSDARG00000053912 5891 1.692 - 0.887 - - 0.805 - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
83. bambia ENSDARG00000055381 2922 1.685 - - - - 0.904 - - - 0.781 BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
84. CABZ01081490.1 ENSDARG00000111653 11892 1.683 - 0.892 - - - - 0.791 - -
85. unc5b ENSDARG00000033327 3432 1.682 - - - - 0.915 - 0.767 - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
86. mapk3 ENSDARG00000070573 6842 1.677 - - - - - 0.957 - - 0.720 mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
87. sdc2 ENSDARG00000002731 6607 1.675 - - - - 0.786 - 0.889 - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
88. psenen ENSDARG00000068698 2777 1.674 - - 0.736 - - - - 0.938 - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
89. serpinb1l4 ENSDARG00000096888 10462 1.671 - 0.867 - - - - - - 0.804 serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7169]
90. EML4_1 EML4_1 8736 1.667 - - - - - - 0.845 - 0.822
91. hnrpkl ENSDARG00000007034 4660 1.666 - - - - - - 0.964 - 0.702 heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
92. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.662 - - 0.772 - - - - - 0.890 cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
93. larsb ENSDARG00000019280 3924 1.661 - - 0.714 - - - - - 0.947 leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
94. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.66 - - - - - - 0.941 0.719 - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
95. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.656 - - - - 0.874 - - 0.782 - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
96. csnk1da ENSDARG00000008370 3469 1.655 - - - - - - - 0.824 0.831 casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
97. ptgdsb ptgdsb 5200 1.654 - - - - - - 0.808 - 0.846
98. nup107 ENSDARG00000016010 1043 1.653 - - 0.721 - - - 0.932 - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
99. usf2 ENSDARG00000020228 2667 1.652 - - - 0.754 0.898 - - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
100. zgc:77262 ENSDARG00000044545 5563 1.647 - - - - 0.881 - - 0.766 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]

There are 1539 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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