Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rarab

Gene Name Gene ID Reads Annotation
rarab ENSDARG00000034893, ENSDARG00000111757 2151 retinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]










Genes with expression patterns similar to rarab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rarab ENSDARG00000034893, ENSDARG00000111757 2151 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoic acid receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-980526-72]
2. man1b1 man1b1 3294 2.429 - 0.845 - - - 0.754 - - 0.830
3. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 2.337 - 0.759 - - - 0.753 0.825 - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
4. stxbp3 ENSDARG00000008142 2604 1.766 - 0.812 - - - - - - 0.954 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
5. lsr ENSDARG00000099291 881 1.733 - 0.820 - - - - - - 0.913 lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
6. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.731 - - - - - - 0.816 - 0.915 pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
7. SLC27A2_1 SLC27A2_1 974 1.728 - - - - - - 0.812 - 0.916
8. pdlim4 ENSDARG00000068973 2567 1.716 - 0.764 - - - - - - 0.952 PDZ and LIM domain 4 [Source:ZFIN;Acc:ZDB-GENE-070308-5]
9. si:ch211-214j24.10 ENSDARG00000045847 5145 1.71 - - - - - - 0.811 - 0.899 si:ch211-214j24.10 [Source:ZFIN;Acc:ZDB-GENE-030131-6301]
10. HGSNAT ENSDARG00000077804 1540 1.699 - 0.901 - - - - 0.798 - - heparan-alpha-glucosaminide N-acetyltransferase [Source:ZFIN;Acc:ZDB-GENE-140106-144]
11. abcg2c ENSDARG00000058574 1261 1.692 - - - - - - 0.772 - 0.920 ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
12. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.676 - - - - - - 0.754 - 0.922 tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
13. si:dkey-117n7.3 ENSDARG00000092944 2518 1.667 - - - - - - 0.786 - 0.881 si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
14. atp6v0a1a ENSDARG00000020847 1250 1.662 - 0.813 - - - - 0.849 - - ATPase H+ transporting V0 subunit a1a [Source:ZFIN;Acc:ZDB-GENE-030131-3027]
15. PACS1 PACS1 2061 1.662 - - - - - - 0.748 - 0.914
16. selt1b 1396 1.653 - 0.724 - - - - - - 0.929 selenoprotein T, 1b
17. Mar-02 Mar-02 1812 1.653 - - - - - 0.712 - - 0.941
18. sorbs3 ENSDARG00000037476 511 1.646 - - - - - - 0.757 - 0.889 sorbin and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-1]
19. galnt6 ENSDARG00000014386 1126 1.644 - 0.743 - - - - - - 0.901 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) [Source:ZFIN;Acc:ZDB-GENE-040426-2272]
20. aqp11 ENSDARG00000100555 983 1.644 - - - - - - 0.759 - 0.885 aquaporin 11 [Source:ZFIN;Acc:ZDB-GENE-080418-1]
21. atp6v1c1a ENSDARG00000023967 4611 1.641 - - - - - - 0.746 - 0.895 ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
22. timm23 timm23 2712 1.639 - 0.788 - - - - - - 0.851
23. zgc:109868 zgc:109868 7474 1.629 - - - - - 0.728 - - 0.901
24. gas2l3 ENSDARG00000045880 614 1.628 - - - - - - 0.705 - 0.923 growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
25. prkcsh ENSDARG00000004470 1424 1.616 - 0.737 - - - - - - 0.879 protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
26. PRPSAP1 ENSDARG00000099222 1249 1.603 - 0.876 - - - - 0.727 - - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040704-40]
27. hspa5 ENSDARG00000103846 4661 1.599 - - - - - 0.820 0.779 - - heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
28. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.595 - - - - - - 0.714 - 0.881 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
29. rangap1a ENSDARG00000041317 1456 1.577 - 0.736 - - - - - - 0.841 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
30. hand2 ENSDARG00000008305 1214 1.576 0.774 0.802 - - - - - - - heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
31. osbpl9 ENSDARG00000069298 2730 1.568 - - - - - - 0.741 - 0.827 oxysterol binding protein-like 9 [Source:ZFIN;Acc:ZDB-GENE-061110-103]
32. ppap2b ppap2b 2900 1.549 - - - - - 0.728 0.821 - -
33. CABZ01092303.1 CABZ01092303.1 8825 1.548 - - - - - - 0.733 - 0.815
34. pfkfb4l pfkfb4l 2539 1.544 - - - - - 0.751 0.793 - -
35. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.544 - - - - - - 0.719 - 0.825 ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
36. RNF130 ENSDARG00000089767 559 1.528 - 0.726 - - - - 0.802 - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
37. nop16 ENSDARG00000044402 3645 1.525 - - - - - - 0.722 - 0.803 NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
38. csad ENSDARG00000026348 1461 1.517 - 0.783 - - - - 0.734 - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
39. JMJD1C_1 JMJD1C_1 3094 1.512 - 0.771 - - - - - - 0.741
40. ctsz ENSDARG00000043081 1073 1.511 - 0.760 - - - - 0.751 - - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
41. BX004812.1 ENSDARG00000096968 5467 1.511 - - - - - - 0.773 - 0.738
42. ccnd2a ENSDARG00000051748 2506 1.511 - 0.799 - - - - - - 0.712 cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
43. nt5c2a ENSDARG00000039399 3062 1.51 - 0.745 - - - - 0.765 - - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
44. ncoa2 ENSDARG00000017929 2520 1.503 - 0.775 - - - - 0.728 - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
45. mpp1 ENSDARG00000105287 1359 1.502 - 0.750 - - - 0.752 - - - membrane protein, palmitoylated 1 [Source:ZFIN;Acc:ZDB-GENE-031113-4]
46. cald1l cald1l 4115 1.501 - 0.761 - - - - 0.740 - -
47. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.5 - - - - - 0.792 0.708 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
48. cdh6 ENSDARG00000014522 5492 1.489 - 0.717 - - - - 0.772 - - cadherin 6 [Source:ZFIN;Acc:ZDB-GENE-050320-92]
49. RABGAP1 ENSDARG00000098967 933 1.486 - - - - - 0.735 0.751 - - RAB GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-170622-1]
50. tjp1a ENSDARG00000077506 2658 1.483 - - - - - - 0.702 - 0.781 tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
51. shc1 ENSDARG00000075437 3278 1.479 - - - - - - 0.767 - 0.712 SHC (Src homology 2 domain containing) transforming protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2538]
52. emilin1b ENSDARG00000026166 1530 1.474 - 0.732 - - - 0.742 - - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
53. mob2a ENSDARG00000023214, ENSDARG00000111189 1740 1.466 - 0.724 - - - 0.742 - - - MOB kinase activator 2a [Source:ZFIN;Acc:ZDB-GENE-040718-56]
54. llgl1 ENSDARG00000009693 4205 1.464 - 0.727 - - - - 0.737 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
55. prcc ENSDARG00000063252 2065 1.461 - 0.725 - - - 0.736 - - - proline rich mitotic checkpoint control factor [Source:ZFIN;Acc:ZDB-GENE-070717-1]
56. mcl1b ENSDARG00000008363 3097 1.458 0.729 - - - - - 0.729 - - MCL1, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-030825-1]
57. smo ENSDARG00000002952 6411 1.456 - - - - - 0.723 0.733 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
58. C7H20orf27 C7H20orf27 1864 1.453 - 0.726 - - - 0.727 - - -
59. slc38a7 ENSDARG00000012002 2219 1.444 - 0.717 - - - 0.727 - - - solute carrier family 38, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-266]
60. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.43 0.703 - - - - - 0.727 - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
61. pafah1b1a ENSDARG00000032013 3183 1.426 - 0.712 - - - - 0.714 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
62. nfu1 ENSDARG00000068125 1743 0.959 - - - - - - - - 0.959 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
63. si:ch73-91k6.2 ENSDARG00000091598 727 0.958 - - - - - - - - 0.958 si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
64. zgc:153151 ENSDARG00000069563 126 0.957 - - - - - - - - 0.957 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
65. casp2 ENSDARG00000062052 559 0.957 - - - - - - - - 0.957 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
66. prkcbb ENSDARG00000022254 319 0.956 - - - - - - - - 0.956 protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
67. smarcd2 ENSDARG00000088877 416 0.954 - - - - - - - - 0.954 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
68. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.953 - - - - - - - - 0.953 tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
69. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 0.953 - - - - - - - - 0.953 calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
70. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.952 - - - - - - - - 0.952 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
71. trim33l ENSDARG00000086126 241 0.952 - - - - - - - - 0.952 tripartite motif containing 33, like [Source:ZFIN;Acc:ZDB-GENE-030131-5695]
72. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.952 - - - - - - - - 0.952 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
73. atrip ENSDARG00000063076 385 0.951 - - - - - - - - 0.951 ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
74. ACBD3 ENSDARG00000042623 159 0.951 - - - - - - - - 0.951 acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
75. b3gat2 ENSDARG00000030733 348 0.951 - - - - - - - - 0.951 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:ZFIN;Acc:ZDB-GENE-040801-191]
76. MAP1S MAP1S 123 0.95 - - - - - - - - 0.950
77. rnf165a ENSDARG00000077906 133 0.95 - - - - - - - - 0.950 ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
78. MIER3 MIER3 114 0.949 - - - - - - - - 0.949
79. FAM83H FAM83H 190 0.949 - - - - - - - - 0.949
80. ptgs1 ENSDARG00000052148 2443 0.949 - - - - - - - - 0.949 prostaglandin-endoperoxide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-020530-1]
81. TIMP4 TIMP4 599 0.949 - - - - - - - - 0.949
82. si:ch211-232i5.1 ENSDARG00000078072 1337 0.949 - - - - - - - - 0.949 si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
83. CR388047.3 ENSDARG00000117023 89 0.949 - - - - - - - - 0.949
84. FUZ ENSDARG00000079730 821 0.949 - - - - - - - - 0.949 fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
85. ide ENSDARG00000075570 4331 0.948 - - - - - - - - 0.948 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
86. CT030712.1 ENSDARG00000044355 83 0.948 - - - - - - - - 0.948 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
87. TPMT TPMT 138 0.948 - - - - - - - - 0.948
88. per1b ENSDARG00000012499 320 0.948 - - - - - - - - 0.948 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
89. BX569781.3 BX569781.3 576 0.948 - - - - - - - - 0.948
90. slc25a39 ENSDARG00000007449 630 0.948 - - - - - - - - 0.948 solute carrier family 25, member 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1250]
91. myo18ab ENSDARG00000061862 124 0.947 - - - - - - - - 0.947 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
92. zgc:112263 zgc:112263 473 0.947 - - - - - - - - 0.947
93. enpp6 ENSDARG00000040469 187 0.947 - - - - - - - - 0.947 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
94. nrg1 ENSDARG00000104314 1081 0.947 - - - - - - - - 0.947 neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
95. ERAP1_1 ERAP1_1 64 0.947 - - - - - - - - 0.947
96. C20H1orf131 C20H1orf131 406 0.946 - - - - - - - - 0.946
97. cd36 ENSDARG00000032639 288 0.946 - - - - - - - - 0.946 CD36 molecule (thrombospondin receptor) [Source:ZFIN;Acc:ZDB-GENE-040718-55]
98. CABZ01063402.1 CABZ01063402.1 64 0.946 - - - - - - - - 0.946
99. si:ch211-89o5.1 si:ch211-89o5.1 91 0.946 - - - - - - - - 0.946
100. si:dkey-246e3.4 ENSDARG00000086390 50 0.946 - - - - - - - - 0.946 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]

There are 1152 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA