Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rapgef6

Gene Name Gene ID Reads Annotation
rapgef6 ENSDARG00000010945 3 Rap guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6972]










Genes with expression patterns similar to rapgef6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rapgef6 ENSDARG00000010945 3 3 1.000 - 1.000 - - - - - 1.000 Rap guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6972]
2. lmx1a ENSDARG00000020354 111 1.717 1.000 - 0.717 - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
3. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
4. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 1.000 - - - - - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
5. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
6. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
7. si:dkey-43k4.4 si:dkey-43k4.4 4 1 1.000 - - - - - - - -
8. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
9. si:dkey-24i24.3 ENSDARG00000088452 27 1 1.000 - - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
10. SH3RF3 ENSDARG00000102334 1 1 1.000 - - - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
11. itprip ENSDARG00000015576 62 1 1.000 - - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
12. dcp2_1 ENSDARG00000104242 74 1 1.000 - - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
13. TTF1_3 TTF1_3 215 1 1.000 - - - - - - - -
14. MYO15B ENSDARG00000074852 6 1 - - 1.000 - - - - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
15. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
16. si:dkey-264b2.3 19 1 1.000 - - - - - - - - si:dkey-264b2.3, transcript variant X2
17. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
18. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
19. BX119910.8 BX119910.8 6 1 1.000 - - - - - - - -
20. cpa2 ENSDARG00000010146 28 1 1.000 - - - - - - - - carboxypeptidase A2 (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040801-182]
21. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
22. CABZ01085048.1 CABZ01085048.1 2 1 - - - - - - - - 1.000
23. ripply2 ENSDARG00000070535 18 1 1.000 - - - - - - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
24. aglb ENSDARG00000100352 22 1 1.000 - - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b [Source:ZFIN;Acc:ZDB-GENE-050309-54]
25. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
26. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 1.000 - - - - - - - -
27. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1 1.000 - - - - - - - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
28. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
29. agmat ENSDARG00000059700 9 1 - - 1.000 - - - - - - agmatine ureohydrolase (agmatinase) [Source:ZFIN;Acc:ZDB-GENE-060929-696]
30. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 1.000 - - - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
31. PDE1C PDE1C 1 1 1.000 - - - - - - - -
32. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
33. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
34. wnt5a ENSDARG00000104973 21 1 1.000 - - - - - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
35. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
36. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
37. si:ch211-10j20.5 si:ch211-10j20.5 2 1 - - - - - - - - 1.000
38. P2RY11 ENSDARG00000014929 75 1 1.000 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
39. lrp2b ENSDARG00000007906 23 1 1.000 - - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
40. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
41. si:ch211-208f21.4 si:ch211-208f21.4 4 1 1.000 - - - - - - - -
42. si:ch211-284d12.1 si:ch211-284d12.1 1 1 1.000 - - - - - - - -
43. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
44. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
45. si:dkey-40j3.3 ENSDARG00000103597 5 1 1.000 - - - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
46. tnr ENSDARG00000020771 20 1 1.000 - - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
47. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
48. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
49. fubp3 ENSDARG00000086896 21 1 1.000 - - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
50. si:dkey-95h12.1 ENSDARG00000040100 2 1 - - 1.000 - - - - - - si:dkey-95h12.1 [Source:ZFIN;Acc:ZDB-GENE-060503-85]
51. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - - - - 1.000 si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
52. GPR64 GPR64 58 1 1.000 - - - - - - - -
53. OXLD1 8 1 1.000 - - - - - - - - oxidoreductase-like domain containing 1, transcript variant X1
54. BX530409.1 BX530409.1 65 1 1.000 - - - - - - - -
55. CR847990.1 CR847990.1 21 1 1.000 - - - - - - - -
56. si:dkeyp-72g9.5 si:dkeyp-72g9.5 1 1 1.000 - - - - - - - -
57. si:dkey-151m22.9 si:dkey-151m22.9 6 1 1.000 - - - - - - - -
58. CABZ01085626.1 ENSDARG00000117294 8 1 1.000 - - - - - - - -
59. WWC1 ENSDARG00000076041 26 1 1.000 - - - - - - - - WW and C2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091118-8]
60. isg15 ENSDARG00000086374 8 1 1.000 - - - - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
61. si:dkey-21o19.6 si:dkey-21o19.6 18 1 1.000 - - - - - - - -
62. cldn15lb ENSDARG00000100844 46 1 1.000 - - - - - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
63. glcea ENSDARG00000005095 33 1 1.000 - - - - - - - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
64. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
65. wdr27_1 ENSDARG00000053386 1 1 1.000 - - - - - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
66. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 1.000 - - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
67. CCSAP CCSAP 147 1 1.000 - - - - - - - -
68. ydjc ENSDARG00000062655 5 1 1.000 - - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
69. cyp27a7 ENSDARG00000033802 216 1 1.000 - - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
70. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
71. zgc:114037_2 11 1 1.000 - - - - - - - - zgc:114037
72. helq ENSDARG00000079818 133 1 1.000 - - - - - - - - helicase, POLQ like [Source:ZFIN;Acc:ZDB-GENE-060503-421]
73. CR352328.3 CR352328.3 9 1 1.000 - - - - - - - -
74. lhfpl5a ENSDARG00000045023 2 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 5a [Source:ZFIN;Acc:ZDB-GENE-110131-8]
75. C25H11orf74 C25H11orf74 161 1 1.000 - - - - - - - -
76. CABZ01072096.1 ENSDARG00000079483 168 1 1.000 - - - - - - - -
77. si:ch211-260c23.1 13 1 - - - - - - - - 1.000 si:ch211-260c23.1, transcript variant X7
78. gng2_1 ENSDARG00000056831 113 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
79. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
80. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 1.000 - - - - - - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
81. cacna2d2 cacna2d2 16 1 - - - - - - - - 1.000
82. crygm2d15 ENSDARG00000069826 48 1 - - 1.000 - - - - - - crystallin, gamma M2d15 [Source:ZFIN;Acc:ZDB-GENE-040718-322]
83. ablim1a ENSDARG00000060149 228 1 1.000 - - - - - - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
84. spata2l ENSDARG00000068814 152 1 1.000 - - - - - - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
85. TRPM4 TRPM4 60 1 1.000 - - - - - - - -
86. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
87. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
88. mir92a-1 20 1 1.000 - - - - - - - - microRNA 92a-1
89. RIMS1 RIMS1 9 1 1.000 - - - - - - - -
90. KHNYN ENSDARG00000092488 10 1 1.000 - - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
91. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
92. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
93. mmrn2a ENSDARG00000076135 37 1 1.000 - - - - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
94. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
95. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
96. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 1.000 - - - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
97. WDR6 ENSDARG00000078571 28 1 1.000 - - - - - - - - WD repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-081104-368]
98. il21 ENSDARG00000067847 2 1 - - - - - - - - 1.000 interleukin 21 [Source:ZFIN;Acc:ZDB-GENE-120510-4]
99. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
100. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -

There are 348 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA