Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rapgef2

Gene Name Gene ID Reads Annotation
rapgef2 ENSDARG00000005482 2586 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]










Genes with expression patterns similar to rapgef2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rapgef2 ENSDARG00000005482 2586 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
2. htatsf1 ENSDARG00000056649 2018 2.495 - - 0.961 - - - 0.737 - 0.797 HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
3. tufm ENSDARG00000104173 9292 2.475 0.734 0.948 - - - - - - 0.793 Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
4. rbfox2 ENSDARG00000052182 6621 2.451 - - 0.744 - - - - 0.922 0.785 RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
5. eif3ha ENSDARG00000102452 9238 2.408 - 0.964 - - - 0.743 0.701 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
6. wu:fb17g07 wu:fb17g07 10567 2.382 - - - - - 0.727 0.729 0.926 -
7. eif3m ENSDARG00000013931 8117 2.327 - - 0.848 - - - 0.776 - 0.703 eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
8. smarca4 smarca4 9726 2.31 - 0.867 0.714 - - - 0.729 - -
9. CPEB4 CPEB4 3249 1.941 - 0.984 0.957 - - - - - -
10. wu:fb54a03 wu:fb54a03 1722 1.927 - 0.996 - - - - - - 0.931
11. cks1b ENSDARG00000007971 2739 1.924 - 0.995 0.929 - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
12. ddx42 ENSDARG00000037928 1659 1.917 - 0.997 - - - - - 0.920 - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
13. snx27b ENSDARG00000016977 2768 1.916 - 0.995 - - - - - 0.921 - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
14. shda ENSDARG00000094243 929 1.896 - 0.996 - - - - - 0.900 - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
15. phf3 ENSDARG00000034768 1372 1.888 - - 0.984 - - - - 0.904 - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
16. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.886 - 0.994 - - - - - 0.892 - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
17. tmem50a ENSDARG00000015757 3244 1.881 - - 0.979 - - - - 0.902 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
18. si:ch73-110p20.1 5932 1.871 - 0.985 0.886 - - - - - - si:ch73-110p20.1
19. ttc3 ENSDARG00000086075 2157 1.861 - - 0.980 - - - - - 0.881 tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
20. cdk11b ENSDARG00000102546 1579 1.859 - - 0.975 - - - - - 0.884 cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
21. ppp2r5eb ENSDARG00000069118 1902 1.846 - - 0.977 - - - - - 0.869 protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
22. DALRD3 ENSDARG00000068602 3062 1.825 - - 0.913 - - - - - 0.912 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
23. CABZ01087568.1 CABZ01087568.1 1487 1.806 - - 0.985 - - - 0.821 - -
24. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.806 - - 0.966 - - - - - 0.840 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
25. eaf2 ENSDARG00000010432 3768 1.804 - - 0.968 - - 0.836 - - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
26. axin2 ENSDARG00000100149 4223 1.801 - - 0.963 - - - - - 0.838 axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
27. aldh3a2b ENSDARG00000029381 2187 1.798 - 0.995 - - - - - - 0.803 aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
28. atp2b4 5891 1.784 - 0.933 0.851 - - - - - - ATPase, Ca++ transporting, plasma membrane 4
29. wnk1b ENSDARG00000039392 3587 1.784 - - 0.965 - - - - - 0.819 WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
30. ube4b ENSDARG00000037017 8012 1.778 - - 0.978 - - - - 0.800 - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
31. fat1 fat1 3934 1.774 - - 0.901 - - - 0.873 - -
32. ndc80 ENSDARG00000071694 1162 1.77 - - 0.963 - - - 0.807 - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
33. ahcyl1 ENSDARG00000056331 1765 1.77 - - 0.954 - - - - - 0.816 adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
34. kidins220b ENSDARG00000017338 1937 1.766 - - - - - - 0.822 - 0.944 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
35. psmd12 ENSDARG00000052377 7763 1.76 - - - - - 0.856 - - 0.904 proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
36. HNRNPA2B1 HNRNPA2B1 14997 1.756 - 0.959 - - - - 0.797 - -
37. hif1ab ENSDARG00000034293 10284 1.75 - 0.965 - - - - - - 0.785 hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
38. adnp2b ENSDARG00000028431 4683 1.737 - - 0.982 - - - 0.755 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
39. setdb1b ENSDARG00000099021 2937 1.736 - - 0.951 - - - 0.785 - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
40. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 1.731 - - 0.984 - - - 0.747 - - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
41. st13 ENSDARG00000021973 7787 1.729 - 0.828 - - - - - 0.901 - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
42. phldb1a ENSDARG00000061093 1637 1.723 - 0.998 - - - - 0.725 - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
43. lpar6a ENSDARG00000062552 1348 1.72 - - 0.981 - - 0.739 - - - lysophosphatidic acid receptor 6a [Source:ZFIN;Acc:ZDB-GENE-061013-343]
44. smarce1 ENSDARG00000016871 9628 1.718 - 0.989 - - - - 0.729 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
45. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 1.715 - - - - - - - 0.909 0.806 regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
46. polb ENSDARG00000003749 2049 1.712 - - - - - - 0.790 0.922 - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
47. zgc:113348 ENSDARG00000103795 1351 1.71 - - 0.980 - - - 0.730 - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
48. ubqln4 ENSDARG00000052975 6453 1.71 - 0.877 - - - - 0.833 - - ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
49. TUBGCP6 1991 1.706 - - 0.976 - - - - - 0.730 tubulin, gamma complex associated protein 6
50. hnrnpr ENSDARG00000014569 3423 1.703 - - 0.945 - - - 0.758 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
51. mccc2 ENSDARG00000017571 5635 1.697 - - 0.935 - - - 0.762 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
52. eif5 ENSDARG00000003681 7986 1.697 - - 0.819 - - - - - 0.878 eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
53. rnf7 ENSDARG00000055524 3390 1.692 - - - - - - 0.821 - 0.871 ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
54. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.688 - - - - - - - 0.898 0.790 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
55. reep5 ENSDARG00000100742 1470 1.679 - - 0.974 - - - 0.705 - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
56. eya3 ENSDARG00000036100 1965 1.675 - - 0.970 - - - 0.705 - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
57. med28 ENSDARG00000037410, ENSDARG00000112591, ENSDARG00000113633, ENSDARG00000117136 629 1.674 - - - - - - 0.758 0.916 - mediator complex subunit 28 [Source:ZFIN;Acc:ZDB-GENE-041121-4]
58. acadvl ENSDARG00000016687 5329 1.673 - - 0.934 - - - 0.739 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
59. taf10 ENSDARG00000068641 3333 1.673 - - - - - - 0.804 - 0.869 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
60. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.668 - - - - - 0.773 - 0.895 - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
61. ncapd2 ENSDARG00000005058 2819 1.662 - - - - - - 0.747 0.915 - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
62. lrp1b lrp1b 3216 1.662 - - 0.868 - - - - - 0.794
63. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.661 - - 0.887 - - - 0.774 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
64. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.661 - - - - - 0.733 - - 0.928 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
65. cbx1b ENSDARG00000054442 1206 1.654 - - - - - - 0.761 - 0.893 chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
66. ssbp4 ENSDARG00000056483 10196 1.652 - - 0.921 - - - 0.731 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
67. rtf1 ENSDARG00000008947 6596 1.648 - - 0.850 - - - - 0.798 - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
68. puf60a ENSDARG00000032175 5618 1.645 - - - - - - 0.710 0.935 - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
69. ppih ENSDARG00000041530 2085 1.644 - - - - - - 0.716 - 0.928 peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
70. hspa4a ENSDARG00000004754 3439 1.644 0.741 - - - - - - - 0.903 heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
71. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.642 - - 0.934 - - - 0.708 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
72. neo1 neo1 4056 1.638 - - - - - - 0.708 0.930 -
73. uck2b ENSDARG00000022213 1542 1.638 - - - - - - 0.753 - 0.885 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
74. sf3b2 ENSDARG00000018049 4675 1.636 - - - - - - 0.708 0.928 - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
75. znf839 ENSDARG00000076988 1032 1.627 - - - 0.740 - - - 0.887 - zinc finger protein 839 [Source:ZFIN;Acc:ZDB-GENE-030131-4936]
76. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.626 - - 0.925 - - - 0.701 - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
77. rhebl1 ENSDARG00000039162 3966 1.622 - - - - - - 0.723 - 0.899 Ras homolog, mTORC1 binding like 1 [Source:ZFIN;Acc:ZDB-GENE-000510-1]
78. pbx2 ENSDARG00000019717 6892 1.621 - - 0.860 - - - - 0.761 - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
79. MRPS12_1 MRPS12_1 2714 1.621 - - - - - - 0.763 - 0.858
80. eif3ja ENSDARG00000012603 6324 1.616 - - - - - - - 0.739 0.877 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
81. slc27a1a ENSDARG00000006240, ENSDARG00000109799 1471 1.613 - - - - - - 0.740 0.873 - solute carrier family 27 (fatty acid transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050320-112]
82. boc ENSDARG00000074335 4832 1.61 - 0.842 - - - - 0.768 - - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
83. yipf3 ENSDARG00000020449 3312 1.61 - - - - - - - 0.857 0.753 Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
84. gars ENSDARG00000059070 17015 1.603 - - 0.853 - - - 0.750 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
85. BX294110.1 ENSDARG00000096875 1761 1.602 - - - - - - 0.733 - 0.869
86. syncripl ENSDARG00000026723 3889 1.601 - - - - - - 0.706 0.895 - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
87. alox12 ENSDARG00000069463 5787 1.599 - - 0.858 - - - - 0.741 - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
88. SERBP1 SERBP1 9276 1.598 - - 0.813 - - - 0.785 - -
89. ttk ENSDARG00000041361 3911 1.593 - - 0.865 - - - 0.728 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
90. rac1 rac1 7341 1.587 - - - - - - 0.764 0.823 -
91. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.586 - - - - - 0.717 - - 0.869 kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
92. prdx1 ENSDARG00000058734 4582 1.585 - - 0.853 - - - 0.732 - - peroxiredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-35]
93. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.578 - - 0.819 - - - 0.759 - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
94. aacs ENSDARG00000012468 1138 1.575 - - - - - - 0.726 - 0.849 acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
95. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.566 0.718 - 0.848 - - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
96. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.566 - - - - - - 0.703 - 0.863 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
97. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.562 - - - - - - 0.711 - 0.851 heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
98. cd82a ENSDARG00000019098 6761 1.561 - 0.835 - - - 0.726 - - - CD82 molecule a [Source:ZFIN;Acc:ZDB-GENE-030131-2818]
99. celf1 ENSDARG00000005315 5598 1.56 0.826 - - - - 0.734 - - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
100. anp32e ENSDARG00000054804 11017 1.556 0.783 - 0.773 - - - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]

There are 1319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA