Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rap1a

Gene Name Gene ID Reads Annotation
rap1a rap1a 5654










Genes with expression patterns similar to rap1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rap1a rap1a 5654 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 3.062 - - 0.831 - - 0.704 0.798 - 0.729 eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
3. kdm6bb ENSDARG00000056929 4807 1.592 - - - - - - 0.858 - 0.734 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
4. pip5k1aa ENSDARG00000100396 1644 1.552 - 0.747 - - - - 0.805 - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
5. srsf2b ENSDARG00000103893 1437 1.551 - 0.713 - - - - 0.838 - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
6. sh3rf1 ENSDARG00000070470 1463 1.548 0.709 - - - - - 0.839 - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
7. si:dkeyp-113d7.1 ENSDARG00000059109 2145 1.527 - - - - - - 0.811 - 0.716 si:dkeyp-113d7.1 [Source:ZFIN;Acc:ZDB-GENE-030131-755]
8. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 1.521 - 0.750 - 0.771 - - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
9. sik2b ENSDARG00000062315 1303 1.52 - 0.790 - - - - 0.730 - - salt-inducible kinase 2b [Source:ZFIN;Acc:ZDB-GENE-071012-1]
10. rangap1a ENSDARG00000041317 1456 1.515 - 0.757 - - - - 0.758 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
11. acat1 ENSDARG00000045888 1488 1.506 - 0.731 - - - - 0.775 - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
12. dnajc1 ENSDARG00000001940 2848 1.503 - 0.788 - - - - 0.715 - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
13. syne2b ENSDARG00000053484 9225 1.495 - 0.794 - 0.701 - - - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
14. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.492 - 0.746 - - - - - - 0.746 RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
15. nudc ENSDARG00000104837 1798 1.488 - 0.749 - - - - - 0.739 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
16. safb ENSDARG00000020467 5608 1.488 - 0.787 - - - - - - 0.701 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
17. si:dkey-67c22.2 ENSDARG00000055389 6410 1.485 - 0.726 - - - - - 0.759 - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
18. cept1a ENSDARG00000058716 1686 1.474 - 0.774 - - - 0.700 - - - choline/ethanolamine phosphotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-081105-47]
19. tbl1xr1b ENSDARG00000008966 2203 1.472 - 0.731 - - - - 0.741 - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
20. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.457 - 0.755 - - - - 0.702 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
21. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.457 - - - - - - 0.745 0.712 - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
22. smfn ENSDARG00000009806 1280 1.457 - 0.729 - 0.728 - - - - - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
23. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.455 - 0.727 - - - - 0.728 - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
24. CREBZF ENSDARG00000089787 4261 1.453 - - 0.746 - - - - - 0.707 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
25. cflara ENSDARG00000055966 464 1.453 - 0.706 - - - - 0.747 - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
26. rnf121 ENSDARG00000060282 1809 1.451 - 0.738 - 0.713 - - - - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
27. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.448 - 0.747 - - - - - 0.701 - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
28. ubap2 ubap2 4167 1.429 - - - - - - 0.727 - 0.702
29. rab33ba ENSDARG00000052290 914 1.426 - 0.705 - - - - - - 0.721 RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
30. ilf2 ENSDARG00000014591 14543 1.422 0.718 - - - - - - - 0.704 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
31. srp14 ENSDARG00000115987 3575 1.419 - 0.701 - - - - 0.718 - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
32. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.407 0.702 - - - - - - 0.705 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
33. ddx21 ENSDARG00000063626 6695 1 - - - - 1.000 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
34. CU862021.1 CU862021.1 5925 1 - - - - 1.000 - - - -
35. ints12 ENSDARG00000091678 3261 1 - - - - 1.000 - - - - integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
36. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1 - - - - 1.000 - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
37. sesn3 ENSDARG00000015822 5328 1 - - - - 1.000 - - - - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
38. BX088708.1 BX088708.1 6503 1 - - - - 1.000 - - - -
39. RFC4 ENSDARG00000042458 3694 1 - - - - 1.000 - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
40. extl3 ENSDARG00000026811 4815 1 - - - - 1.000 - - - - exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
41. las1l ENSDARG00000062457, ENSDARG00000114475 3987 1 - - - - 1.000 - - - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
42. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1 - - - - 1.000 - - - - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
43. FP102272.1 FP102272.1 9473 0.999 - - - - 0.999 - - - -
44. CABZ01080098.1 ENSDARG00000110680 10942 0.999 - - - - 0.999 - - - -
45. si:ch73-21g5.7 ENSDARG00000093156 9412 0.999 - - - - 0.999 - - - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
46. hif1al ENSDARG00000100826 18627 0.998 - - - - 0.998 - - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
47. tox ENSDARG00000032317 9126 0.998 - - - - 0.998 - - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
48. ddx39ab ENSDARG00000015111 11619 0.997 - - - - 0.997 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
49. ppm1da ENSDARG00000009273 7713 0.997 - - - - 0.997 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
50. cmn ENSDARG00000055527 14039 0.997 - - - - 0.997 - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
51. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 0.996 - - - - 0.996 - - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
52. strap ENSDARG00000007405 6426 0.996 - - - - 0.996 - - - - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
53. rpsa ENSDARG00000019181 93440 0.993 - - - - 0.993 - - - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]
54. rpl38 ENSDARG00000006413 59590 0.99 - - - - 0.990 - - - - ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
55. icn ENSDARG00000009978 85647 0.983 - - - - 0.983 - - - - ictacalcin [Source:ZFIN;Acc:ZDB-GENE-030131-8599]
56. aldob ENSDARG00000053684 30498 0.979 - - - - 0.979 - - - - aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
57. rplp0 ENSDARG00000051783 88740 0.975 - - - - 0.975 - - - - ribosomal protein, large, P0 [Source:ZFIN;Acc:ZDB-GENE-000629-1]
58. aldoaa ENSDARG00000011665 56184 0.966 - - - - 0.966 - - - - aldolase a, fructose-bisphosphate, a [Source:ZFIN;Acc:ZDB-GENE-030131-8369]
59. zgc:174153 ENSDARG00000079376 12007 0.96 - - - - 0.960 - - - - zgc:174153 [Source:ZFIN;Acc:ZDB-GENE-080215-7]
60. rpl36a ENSDARG00000058105, ENSDARG00000112656 136684 0.947 - - - - 0.947 - - - - ribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
61. hsp90ab1 ENSDARG00000029150 102372 0.916 - - - - 0.916 - - - - heat shock protein 90, alpha (cytosolic), class B member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-95]
62. rps26l ENSDARG00000030408 146322 0.915 - - - - 0.915 - - - - ribosomal protein S26, like [Source:ZFIN;Acc:ZDB-GENE-040426-1706]
63. SGTA ENSDARG00000019941 2959 0.899 - 0.899 - - - - - - - small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
64. snrpa ENSDARG00000018890 4593 0.886 - - - - - - 0.886 - - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
65. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 0.883 - 0.883 - - - - - - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
66. dad1 ENSDARG00000102105 14788 0.878 - 0.878 - - - - - - - defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
67. ccdc85ca ENSDARG00000005232 3218 0.875 - 0.875 - - - - - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
68. timmdc1 ENSDARG00000053466 2179 0.874 - - - - - - 0.874 - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
69. coro1ca ENSDARG00000035598 9278 0.873 - 0.873 - - - - - - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
70. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 0.862 - - - - - - 0.862 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
71. myo1b ENSDARG00000024694 1761 0.862 - - - - - - 0.862 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
72. frmd6 ENSDARG00000002332 2698 0.859 - - - - - - 0.859 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
73. map4k5 ENSDARG00000039125 1595 0.859 - - - - - - 0.859 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6497]
74. twf1a ENSDARG00000115712 3465 0.858 - 0.858 - - - - - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
75. orc4 ENSDARG00000101161 1081 0.857 - - - - - - 0.857 - - origin recognition complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2224]
76. FRG1 ENSDARG00000056504 1196 0.857 - - - - - - 0.857 - - FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
77. creb1a ENSDARG00000053586 5068 0.85 - - - - - - 0.850 - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
78. txlna ENSDARG00000077037 2614 0.849 - - - - - - - 0.849 - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
79. serpinf2b ENSDARG00000061383 3859 0.847 - 0.847 - - - - - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b [Source:ZFIN;Acc:ZDB-GENE-061215-114]
80. rps25 ENSDARG00000041811 52182 0.844 - - - - 0.844 - - - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
81. aim1a 2981 0.841 - 0.841 - - - - - - - crystallin beta-gamma domain containing 1a, transcript variant X1
82. lamtor3 ENSDARG00000057075 2282 0.839 - 0.839 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]
83. SHISA4 ENSDARG00000006307, ENSDARG00000112041 4884 0.838 - 0.838 - - - - - - - shisa family member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-419]
84. snx17 ENSDARG00000091418 781 0.837 - - - - - - 0.837 - - sorting nexin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9475]
85. mcm7 ENSDARG00000101180 12417 0.836 - 0.836 - - - - - - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
86. MIPEP ENSDARG00000055344 351 0.836 - - - - - - 0.836 - - mitochondrial intermediate peptidase [Source:ZFIN;Acc:ZDB-GENE-060503-662]
87. pdxdc1 ENSDARG00000101886 1958 0.835 - 0.835 - - - - - - - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
88. slc25a25a ENSDARG00000010572 1240 0.833 - 0.833 - - - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25a [Source:ZFIN;Acc:ZDB-GENE-040426-2396]
89. mob3a ENSDARG00000019113 2551 0.832 - - - - - - 0.832 - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
90. znf319 znf319 3027 0.831 - - - - - - 0.831 - -
91. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 0.83 - - - - - - 0.830 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
92. lemd3 ENSDARG00000015824 2868 0.828 - - - - - - 0.828 - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
93. hoxc6b ENSDARG00000101954 967 0.826 - - - - - - 0.826 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
94. cerk ENSDARG00000069169 897 0.823 - - - - - - 0.823 - - ceramide kinase [Source:ZFIN;Acc:ZDB-GENE-041210-210]
95. igf2bp2b ENSDARG00000099758, ENSDARG00000111268, ENSDARG00000116761 588 0.823 - - - - - - 0.823 - - insulin-like growth factor 2 mRNA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060503-536]
96. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 0.822 - - - - - - 0.822 - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
97. EMG1 ENSDARG00000056914 1343 0.821 - 0.821 - - - - - - - EMG1 N1-specific pseudouridine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060421-2909]
98. kat6b ENSDARG00000055429 625 0.821 - - - - - - - 0.821 - K(lysine) acetyltransferase 6B [Source:ZFIN;Acc:ZDB-GENE-000607-52]
99. tmem248 ENSDARG00000018825 1560 0.821 - - - - - - 0.821 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
100. dpm3 ENSDARG00000058650 4386 0.82 - 0.820 - - - - - - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1782]

There are 706 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA