Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rangap1b

Gene Name Gene ID Reads Annotation
rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]










Genes with expression patterns similar to rangap1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
2. gnb1b ENSDARG00000104372 1077 2.405 - 0.794 - - - - 0.720 0.891 - guanine nucleotide binding protein (G protein), beta polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2855]
3. CCDC106 CCDC106 1908 2.328 - 0.847 - - - - 0.775 0.706 -
4. daxx ENSDARG00000000729 734 2.233 - - - 0.774 - - 0.724 0.735 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
5. med29 ENSDARG00000026448, ENSDARG00000109733 972 2.174 - - - - - - 0.746 0.709 0.719 mediator complex subunit 29 [Source:ZFIN;Acc:ZDB-GENE-021217-1]
6. rybpa ENSDARG00000037773 904 1.663 - 0.734 - - - - - 0.929 - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
7. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.657 - 0.786 - - - - 0.871 - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
8. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.652 - - - - - - 0.765 0.887 - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
9. tdp1 ENSDARG00000073866 214 1.649 - - - - - - 0.809 - 0.840 tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]
10. CABZ01073405.1 CABZ01073405.1 275 1.647 - 0.810 - - - - 0.837 - -
11. gemin2 ENSDARG00000015638 886 1.607 - - - - - - 0.799 - 0.808 gem (nuclear organelle) associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3756]
12. trrap ENSDARG00000100623 3429 1.607 - - - - - 0.745 0.862 - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
13. CR478286.1_1 CR478286.1_1 306 1.598 - 0.833 - - - 0.765 - - -
14. cenpi ENSDARG00000052565 482 1.596 - 0.711 - - - - 0.885 - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
15. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.581 - - - - - 0.712 0.869 - - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
16. ogfr ENSDARG00000037837 1001 1.572 - - - - - - - 0.740 0.832 opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
17. inadl 80 1.572 - 0.759 - - - - 0.813 - - InaD-like (Drosophila), transcript variant X4
18. dnph1 ENSDARG00000075730 403 1.572 - 0.717 - - - - 0.855 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
19. psmd4b ENSDARG00000023279 2002 1.569 - - - - - - 0.793 - 0.776 proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
20. sf3a1 ENSDARG00000041887 6702 1.568 - - - - - - 0.867 0.701 - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
21. ulk4 ENSDARG00000004176 85 1.566 - 0.778 - - - - 0.788 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
22. cdc25 cdc25 3913 1.565 - - 0.714 - - - - 0.851 -
23. actr1 ENSDARG00000011611 3879 1.565 - 0.769 - - - - - 0.796 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
24. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.555 - - 0.750 - - - - 0.805 - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
25. htatip htatip 1553 1.554 - 0.822 - - - - 0.732 - -
26. vangl2 ENSDARG00000027397 2418 1.551 - - - - - - 0.796 - 0.755 VANGL planar cell polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-020507-3]
27. gstz1 ENSDARG00000027984 278 1.55 - 0.741 - - - 0.809 - - - glutathione S-transferase zeta 1 [Source:ZFIN;Acc:ZDB-GENE-040718-184]
28. rfc5 ENSDARG00000035634 974 1.547 - - - 0.732 - - 0.815 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
29. nptnb ENSDARG00000043864 165 1.546 - 0.824 - - - - - - 0.722 neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
30. rbb4 rbb4 15541 1.543 - - 0.760 - - - - 0.783 -
31. SUOX ENSDARG00000091574 122 1.543 - 0.725 - - - - 0.818 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
32. dram2b ENSDARG00000044241 503 1.542 - - - - - 0.715 0.827 - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
33. ift57 ENSDARG00000021022 288 1.539 - - - - - - 0.812 - 0.727 intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
34. chrac1 ENSDARG00000042337 2590 1.533 - - - - - - 0.814 - 0.719 chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
35. DENND1A ENSDARG00000014592 436 1.533 - 0.828 - - - - - 0.705 - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
36. fam219aa ENSDARG00000016396 1788 1.529 - - - - - - 0.811 0.718 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
37. ruvbl1 ENSDARG00000002591 2381 1.527 - - - 0.738 - - 0.789 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
38. zgc:113372 ENSDARG00000053263 178 1.526 - - - - - - 0.807 - 0.719 zgc:113372 [Source:ZFIN;Acc:ZDB-GENE-050913-150]
39. snip1 ENSDARG00000087528 275 1.525 - 0.745 - - - - - - 0.780 Smad nuclear interacting protein [Source:ZFIN;Acc:ZDB-GENE-041026-3]
40. stat2 ENSDARG00000031647, ENSDARG00000116348 441 1.522 - 0.788 - - - - - 0.734 - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
41. ccrl1a ccrl1a 40 1.522 - 0.731 - - - - 0.791 - -
42. zc3h3 ENSDARG00000090751 206 1.521 - - - - - - - 0.725 0.796 zinc finger CCCH-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9399]
43. zcchc10 ENSDARG00000091092 1333 1.514 - - - - - - 0.784 0.730 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
44. kpna1 ENSDARG00000016360 1275 1.511 0.725 0.786 - - - - - - - karyopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]
45. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.495 - 0.782 - 0.713 - - - - - deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
46. zgc:111974 zgc:111974 1386 1.495 - - - - - - 0.791 0.704 -
47. acsl3b ENSDARG00000014674 3748 1.491 - - - - - - 0.703 0.788 - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
48. atp7a ENSDARG00000003699 476 1.483 - - - - - - - 0.721 0.762 ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
49. zgc:158852 ENSDARG00000102076 65 1.477 - - - - - - 0.757 - 0.720 zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
50. zc3h7b 2936 1.476 - 0.723 0.753 - - - - - - zinc finger CCCH-type containing 7B
51. phf14 ENSDARG00000061458 492 1.475 - 0.705 - - - - - - 0.770 PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
52. pik3c2b ENSDARG00000086927 864 1.473 - - - - - - 0.770 0.703 - phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta [Source:ZFIN;Acc:ZDB-GENE-050309-145]
53. trmt112 ENSDARG00000071878, ENSDARG00000109878 930 1.472 0.754 - - - - - 0.718 - - tRNA methyltransferase 11-2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-30]
54. si:ch211-57i17.2 ENSDARG00000093354 58 1.471 - 0.741 - - - - - 0.730 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
55. phf17 phf17 790 1.469 - 0.712 - - - - 0.757 - -
56. si:dkey-229d11.5 ENSDARG00000094392 33 1.467 - 0.719 - - - - - - 0.748 si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
57. skap2 ENSDARG00000000906 146 1.466 - 0.743 - - - - - - 0.723 src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
58. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 1.46 - 0.728 - - - - 0.732 - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
59. cbx4 ENSDARG00000099441 372 1.458 - 0.709 - - - - 0.749 - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
60. IPO11 ENSDARG00000054224 616 1.458 - 0.730 - - - - 0.728 - - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
61. smfn ENSDARG00000009806 1280 1.457 0.724 - - - - - - 0.733 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
62. mtfr2 ENSDARG00000060394 482 1.456 - - - - - - 0.726 0.730 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
63. ppp4ca ENSDARG00000070570 8395 1.455 - 0.733 - 0.722 - - - - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
64. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 1.453 - 0.722 - - - - - 0.731 - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
65. si:ch211-67e16.4 ENSDARG00000086317 609 1.452 - 0.740 - - - - - 0.712 - si:ch211-67e16.4 [Source:ZFIN;Acc:ZDB-GENE-070912-311]
66. C8H1orf106 C8H1orf106 2690 1.452 - 0.749 0.703 - - - - - -
67. C15H11orf57 C15H11orf57 860 1.451 - - - - - - 0.714 - 0.737
68. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.45 - - - - - - 0.737 - 0.713 progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
69. rpp38 ENSDARG00000040350 558 1.446 - - - - - 0.712 - 0.734 - ribonuclease P/MRP 38 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-258]
70. fen1 ENSDARG00000011404 3358 1.446 - - 0.732 - - - - - 0.714 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
71. asap1a ENSDARG00000029463 1566 1.446 - - - - - - 0.718 0.728 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
72. CR954963.1 ENSDARG00000097153 1135 1.445 - - - - - - 0.709 0.736 -
73. si:ch1073-174d20.2 ENSDARG00000079651 171 1.442 - - - - - 0.709 0.733 - - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
74. spint1b ENSDARG00000012467 97 1.442 - - - - - - 0.734 - 0.708 serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
75. fip1l1b ENSDARG00000070431 1677 1.44 - - - - - - 0.710 - 0.730 FIP1 like 1b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041010-138]
76. naa30 ENSDARG00000079686 814 1.439 - 0.704 - - - - - 0.735 - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
77. pias4a ENSDARG00000007081 4264 1.438 - - - 0.736 - - 0.702 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
78. dgcr6 ENSDARG00000005500 479 1.435 - 0.706 - - - - - - 0.729 DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
79. irf2a ENSDARG00000007387 915 1.43 - - - - - 0.708 0.722 - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
80. kcnk1a ENSDARG00000045067 743 1.427 - 0.718 - - - - 0.709 - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
81. CSK ENSDARG00000067996 476 1.425 - - - - - - 0.701 0.724 - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
82. JHDM1D JHDM1D 2277 1.425 - 0.700 0.725 - - - - - -
83. apbb2b ENSDARG00000099995 1397 1.411 - 0.702 - - - - 0.709 - - amyloid beta (A4) precursor protein-binding, family B, member 2b [Source:ZFIN;Acc:ZDB-GENE-090313-73]
84. syt2a ENSDARG00000025206 681 0.963 - - - - - - 0.963 - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
85. RNF169 ENSDARG00000042825 727 0.937 - - - - - - - 0.937 - ring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
86. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 0.928 - - - - - - - 0.928 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
87. elp5 ENSDARG00000067918 541 0.927 - - - - - - 0.927 - - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
88. ctnnd2b ENSDARG00000003779 964 0.922 - - - - - - - 0.922 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
89. C10H21orf91 C10H21orf91 644 0.92 - - - - - - - 0.920 -
90. zgc:112083 ENSDARG00000037405 306 0.92 - - - - - - 0.920 - - zgc:112083 [Source:ZFIN;Acc:ZDB-GENE-050417-284]
91. rab11fip4a ENSDARG00000090170 839 0.918 - - - - - - 0.918 - - RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]
92. CU929431.1 CU929431.1 2234 0.915 - - - - - - - 0.915 -
93. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.913 - - - - - - - 0.913 - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
94. si:dkey-184d2.3 si:dkey-184d2.3 1536 0.905 - - - - - - - 0.905 -
95. nudc ENSDARG00000104837 1798 0.904 - - - - - - - 0.904 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
96. usf1 ENSDARG00000041689 1619 0.9 - - - - - - 0.900 - - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
97. MAN1A2 ENSDARG00000041728 359 0.899 - - - - - - 0.899 - - mannosidase, alpha, class 1A, member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-390]
98. KANSL1_1 KANSL1_1 1809 0.897 - - - - - - 0.897 - -
99. MARK3 MARK3 1767 0.897 - - - - - - - 0.897 -
100. POLDIP3 ENSDARG00000099375 832 0.896 - - - - - - 0.896 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]

There are 1466 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA