Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rai14

Gene Name Gene ID Reads Annotation
rai14 ENSDARG00000039974, ENSDARG00000111103 916 retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]










Genes with expression patterns similar to rai14

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rai14 ENSDARG00000039974, ENSDARG00000111103 916 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
2. tnc ENSDARG00000021948, ENSDARG00000113518 12162 3.166 0.718 0.912 - - - - 0.759 0.777 - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
3. sh3bgr ENSDARG00000021633 3498 2.593 0.796 0.904 - - - - 0.893 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
4. sptb ENSDARG00000030490 7128 2.588 0.833 0.858 - - - - 0.897 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
5. myod1 ENSDARG00000030110 6019 2.56 - 0.844 - - - - 0.873 0.843 - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
6. pygma ENSDARG00000055518 15972 2.539 0.767 0.912 - - - - 0.860 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
7. NRAP ENSDARG00000009341 3565 2.533 0.785 0.880 - - - - 0.868 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
8. limch1a ENSDARG00000074275 2981 2.528 - 0.741 - - - - 0.805 0.982 - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
9. MUSTN1 MUSTN1 1882 2.526 0.770 0.850 - - - - 0.906 - -
10. prx ENSDARG00000017246 6183 2.525 0.742 0.901 - - - - 0.882 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
11. stac3 ENSDARG00000098883 1765 2.522 0.754 0.871 - - - - 0.897 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
12. tnnt2d ENSDARG00000002988 7590 2.517 0.846 0.807 - - - - 0.864 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
13. usp28 ENSDARG00000008880 1850 2.513 0.772 0.891 - - - - 0.850 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
14. srl ENSDARG00000104587 11126 2.513 0.753 0.854 - - - - 0.906 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
15. AKAP2 AKAP2 4178 2.511 0.732 - - - - - 0.808 0.971 -
16. MYOM1 MYOM1 3870 2.487 0.843 0.727 - - - - 0.917 - -
17. C13H10orf71 3489 2.486 0.781 0.839 - - - - 0.866 - - chromosome 13 C10orf71 homolog
18. BX294434.1 ENSDARG00000061272 6493 2.48 0.715 0.878 - - - - 0.887 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
19. CR392006.1 CR392006.1 1401 2.477 0.734 0.844 - - - - 0.899 - -
20. hhatla ENSDARG00000039051 6598 2.466 0.751 0.867 - - - - 0.848 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
21. myhc4 ENSDARG00000035438 1322 2.44 0.773 0.873 - - - - 0.794 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
22. trdn ENSDARG00000041779 4283 2.438 0.753 0.819 - - - - 0.866 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
23. znf648 ENSDARG00000104823 1918 2.436 0.800 0.857 - - - - 0.779 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
24. pbxip1a ENSDARG00000071015 4960 2.423 0.772 0.848 - - - - 0.803 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
25. ntmt1 ENSDARG00000022399 5779 2.403 0.707 0.841 - - - - 0.855 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
26. xirp2a ENSDARG00000071113 7113 2.398 0.754 0.802 - - - - 0.842 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
27. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.397 0.737 0.867 - - - - 0.793 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
28. hapln1a ENSDARG00000089769 12334 2.396 0.795 0.793 - - - - 0.808 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
29. cacng1 cacng1 3118 2.39 0.755 0.831 - - - - 0.804 - -
30. chrnd ENSDARG00000019342 2728 2.376 0.705 0.836 - - - - 0.835 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
31. asb5b ENSDARG00000053222 1207 2.367 0.714 0.820 - - - - 0.833 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
32. tns1 tns1 5891 2.365 0.800 0.742 - - - - 0.823 - -
33. plod2 ENSDARG00000011821 1656 2.364 0.708 0.815 - - - - 0.841 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
34. vwde ENSDARG00000103443 5758 2.349 0.704 0.757 - - - - 0.888 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
35. zgc:153662 zgc:153662 4604 2.338 0.855 0.707 - - - - 0.776 - -
36. akap6 ENSDARG00000077295 1382 2.338 0.709 0.849 - - - - 0.780 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
37. col11a1b ENSDARG00000009014 9998 2.332 - - - - - 0.705 0.818 0.809 - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
38. col9a3 ENSDARG00000037845 6564 2.312 0.746 0.794 - - - - 0.772 - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
39. kcnma1a ENSDARG00000079840 2584 2.31 0.705 0.725 - - - - 0.880 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
40. CU633479.5 ENSDARG00000114818 1815 2.304 0.732 0.706 - - - - 0.866 - -
41. myoz2b ENSDARG00000037266 2139 2.299 0.750 0.736 - - - - 0.813 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
42. MYOT ENSDARG00000076312 1791 2.299 0.740 0.727 - - - - 0.832 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
43. col11a2 ENSDARG00000012422 3204 2.295 0.730 0.791 - - - - 0.774 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
44. fgf6a ENSDARG00000009351 799 2.293 0.755 0.720 - - - - 0.818 - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
45. lgals2a ENSDARG00000054942 888 2.291 0.771 0.733 - - - - 0.787 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
46. PHB2 PHB2 3755 2.288 0.741 0.738 - - - - 0.809 - -
47. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 2.274 0.734 0.736 - - - - 0.804 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
48. epyc ENSDARG00000056950 7783 2.273 0.722 0.801 - - - - 0.750 - - epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
49. notum2 ENSDARG00000088411 823 2.264 0.765 0.778 - - - - 0.721 - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
50. fgf13a ENSDARG00000035056 752 2.263 0.741 0.750 - - - - 0.772 - - fibroblast growth factor 13a [Source:ZFIN;Acc:ZDB-GENE-041114-101]
51. ppp1r14c ENSDARG00000077341 1587 2.259 0.783 0.730 - - - - 0.746 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
52. gypc ENSDARG00000041546 1487 2.258 0.708 0.747 - - - - 0.803 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
53. arpp21 ENSDARG00000061081 892 2.245 0.771 0.754 - - - - 0.720 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
54. CR792456.1 CR792456.1 783 2.242 0.717 0.753 - - - - 0.772 - -
55. cspg4 ENSDARG00000078227 1084 2.156 0.730 0.700 - - - - 0.726 - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
56. srpk3 ENSDARG00000005916 1546 1.799 - 0.899 - - - - 0.900 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
57. nmrk2 ENSDARG00000067848 10293 1.775 - 0.879 - - - - 0.896 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
58. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.747 0.893 0.854 - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
59. efemp2a ENSDARG00000094324 39261 1.736 0.844 - - - - - 0.892 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
60. frmd6 ENSDARG00000002332 2698 1.736 - 0.751 - - - - - 0.985 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
61. pvalb4 ENSDARG00000024433 35736 1.731 0.856 - - - - - 0.875 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
62. TENC1 TENC1 1729 1.73 - 0.855 - - - - 0.875 - -
63. zgc:158296 ENSDARG00000070923 3935 1.73 - 0.857 - - - - 0.873 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
64. rp42-pen rp42-pen 3395 1.729 - 0.887 - - - - 0.842 - -
65. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.728 - - - - - - 0.744 0.984 - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
66. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.726 - 0.831 - - - - 0.895 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
67. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.724 - 0.866 - - - - 0.858 - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
68. serpinf1 ENSDARG00000069048 2083 1.723 - - - - - - 0.914 0.809 - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
69. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.722 - 0.825 - - - - 0.897 - -
70. mybphb ENSDARG00000003081 5208 1.72 - 0.868 - - - - 0.852 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
71. BX530018.3 ENSDARG00000107022 614 1.716 - 0.905 - - - - 0.811 - -
72. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.714 - 0.745 - - - - - 0.969 - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
73. hspg2 ENSDARG00000076564 3440 1.712 - 0.826 - - - - 0.886 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
74. tnw 16679 1.71 - 0.855 - - - - 0.855 - - tenascin W, transcript variant X2
75. tnnc1b ENSDARG00000037539 13945 1.71 - 0.824 - - - - 0.886 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
76. jag1a ENSDARG00000030289 1275 1.71 - 0.726 - - - - - 0.984 - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
77. rbfa ENSDARG00000073705 601 1.705 - 0.726 - - - - - 0.979 - ribosome binding factor A [Source:ZFIN;Acc:ZDB-GENE-070410-83]
78. lamb2 ENSDARG00000002084 3265 1.699 0.861 0.838 - - - - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
79. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.697 - 0.819 - - - - 0.878 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
80. mybpc2b ENSDARG00000021265 9618 1.696 - 0.902 - - - - 0.794 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
81. txlnbb ENSDARG00000076241 6396 1.696 - 0.866 - - - - 0.830 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
82. jph1a ENSDARG00000058603 2852 1.694 - 0.808 - - - - 0.886 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
83. slco3a1 ENSDARG00000018726 590 1.692 - - - - - 0.705 - 0.987 - solute carrier organic anion transporter family, member 3A1 [Source:ZFIN;Acc:ZDB-GENE-030131-8662]
84. COL22A1 COL22A1 4473 1.692 - 0.839 - - - - 0.853 - -
85. PTPLA PTPLA 4044 1.692 - 0.859 - - - - 0.833 - -
86. ryr1b ENSDARG00000023797 5693 1.691 - 0.800 - - - - 0.891 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
87. CABZ01080590.2 CABZ01080590.2 2038 1.689 0.834 - - - - - 0.855 - -
88. chrna1 ENSDARG00000009021 2931 1.689 - 0.843 - - - - 0.846 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
89. CU638714.1 ENSDARG00000100303 2132 1.681 - 0.790 - - - - 0.891 - -
90. DNAJA4 ENSDARG00000051762 5657 1.681 - 0.802 - - - - 0.879 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
91. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.679 - - - - - 0.722 - 0.957 - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
92. smyd2b ENSDARG00000005629 8181 1.674 0.787 0.887 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
93. rtn2a ENSDARG00000016088 12184 1.673 0.777 - - - - - 0.896 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
94. pdcd4a ENSDARG00000021702 7293 1.671 - - - - - - 0.772 0.899 - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
95. fitm1 ENSDARG00000056464 1759 1.665 - 0.800 - - - - 0.865 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
96. nexn ENSDARG00000057317 10972 1.664 0.765 - - - - - 0.899 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
97. smtnl1 ENSDARG00000041257 7410 1.661 0.786 - - - - - 0.875 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
98. obsl1b ENSDARG00000077388 2511 1.66 - 0.886 - - - - 0.774 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
99. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.659 - 0.853 - - - - 0.806 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
100. FHOD3_1 FHOD3_1 983 1.658 - 0.756 - - - - 0.902 - -

There are 1326 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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