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Results for rag1

Gene Name Gene ID Reads Annotation
rag1 ENSDARG00000052122 13 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]










Genes with expression patterns similar to rag1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rag1 ENSDARG00000052122 13 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
2. nfixb ENSDARG00000061836 7 1.862 - - - - 0.979 - - - 0.883 nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
3. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.726 0.772 - - - 0.954 - - - - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
4. ncs1b ENSDARG00000054186 252 1.707 - - 0.943 - - - - - 0.764 neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
5. or115-12 ENSDARG00000044748 2 1.659 - - - - - - - 0.788 0.871 odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
6. lhx2a ENSDARG00000037964 3 1.659 - - - - - - - 0.788 0.871 LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-091118-109]
7. or125-4 ENSDARG00000095417 2 1.659 - - - - - - - 0.788 0.871 odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
8. si:ch73-60p2.1 si:ch73-60p2.1 21 1.656 0.793 - - - 0.863 - - - -
9. TSPAN1 ENSDARG00000052027 4 1.656 - - 0.943 - - - - 0.713 - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
10. taar14h ENSDARG00000090464 22 1.565 - - - - - - - 0.768 0.797 trace amine associated receptor 14h [Source:ZFIN;Acc:ZDB-GENE-041014-32]
11. pvalb5 ENSDARG00000032836 242 1.524 - - - - - - - 0.707 0.817 parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
12. PEG3_9 PEG3_9 3 1.496 - - 0.708 - - - - 0.788 -
13. top3b ENSDARG00000027586 8 1.486 - - 0.712 - - - - - 0.774 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
14. traf1 ENSDARG00000069482 50 1.456 - - 0.739 - 0.717 - - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
15. radil ENSDARG00000079779 14 1 1.000 - - - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
16. foxa ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 6 1 1.000 - - - - - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
17. si:ch211-232d10.3 ENSDARG00000104008 2 1 1.000 - - - - - - - - si:ch211-232d10.3 [Source:ZFIN;Acc:ZDB-GENE-081103-4]
18. XKR8 XKR8 9 1 1.000 - - - - - - - -
19. fpgt ENSDARG00000042139 155 1 1.000 - - - - - - - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
20. ptger1c ENSDARG00000078602, ENSDARG00000110042 2 1 1.000 - - - - - - - - prostaglandin E receptor 1c (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-120917-4]
21. sumf2 ENSDARG00000069497 51 1 1.000 - - - - - - - - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
22. slc25a23b ENSDARG00000024708 51 1 1.000 - - - - - - - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23b [Source:ZFIN;Acc:ZDB-GENE-040724-220]
23. si:dkey-53f14.2 si:dkey-53f14.2 4 1 1.000 - - - - - - - -
24. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1 1.000 - - - - - - - - gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
25. si:ch211-74m13.3 ENSDARG00000076144 55 1 1.000 - - - - - - - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
26. SNORD59 SNORD59 7 1 1.000 - - - - - - - -
27. ccrl1b ccrl1b 154 1 1.000 - - - - - - - -
28. si:ch73-119o17.1 si:ch73-119o17.1 6 1 1.000 - - - - - - - -
29. TRMT12 ENSDARG00000060338 58 1 1.000 - - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
30. CABZ01088930.1 CABZ01088930.1 20 1 1.000 - - - - - - - -
31. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1 1.000 - - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
32. FCHSD2_1 FCHSD2_1 14 1 1.000 - - - - - - - -
33. BX005006.2 BX005006.2 1 1 1.000 - - - - - - - -
34. si:ch211-76l23.4 ENSDARG00000096242 202 1 1.000 - - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
35. si:dkey-63d15.12 ENSDARG00000075480 9 1 1.000 - - - - - - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
36. ZBED1_3 ZBED1_3 7 1 1.000 - - - - - - - -
37. cdh10 cdh10 38 1 1.000 - - - - - - - -
38. KEL ENSDARG00000076950 159 1 1.000 - - - - - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
39. slc4a4b ENSDARG00000044808 9 1 1.000 - - - - - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
40. BX649391.1 BX649391.1 2 1 1.000 - - - - - - - -
41. map3k4 ENSDARG00000104835 34 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
42. ENKD1 ENSDARG00000043550 44 1 1.000 - - - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
43. atad1b ENSDARG00000056609 40 1 1.000 - - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
44. si:ch73-62b13.1 ENSDARG00000093269 11 1 - - 1.000 - - - - - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
45. BX324198.1 BX324198.1 12 1 1.000 - - - - - - - -
46. si:ch211-11i5.3 si:ch211-11i5.3 7 1 1.000 - - - - - - - -
47. GANC ENSDARG00000074556 36 1 1.000 - - - - - - - - glucosidase, alpha; neutral C [Source:ZFIN;Acc:ZDB-GENE-130530-754]
48. mapre3a ENSDARG00000020231 100 1 1.000 - - - - - - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
49. si:zfos-2548d7.1 si:zfos-2548d7.1 3 1 1.000 - - - - - - - -
50. ZBED1_1 ZBED1_1 3 1 1.000 - - - - - - - -
51. SNORD52 SNORD52 23 1 1.000 - - - - - - - -
52. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - - - - - - - 1.000 - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
53. CHST15 ENSDARG00000074527 210 1 1.000 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
54. mylka ENSDARG00000034801 133 1 1.000 - - - - - - - - myosin, light chain kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8207]
55. fgf3 ENSDARG00000101540 75 1 1.000 - - - - - - - - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
56. fut11 ENSDARG00000102402 56 1 1.000 - - - - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
57. U2_5 U2_5 5 1 1.000 - - - - - - - -
58. ccdc33 ENSDARG00000051858 11 1 1.000 - - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
59. GAS2 18 1 1.000 - - - - - - - - growth arrest specific 2, transcript variant X1
60. CU302436.1_1 ENSDARG00000114500 18 1 1.000 - - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
61. BX000348.1 BX000348.1 2 1 1.000 - - - - - - - -
62. CR848814.2 CR848814.2 19 1 1.000 - - - - - - - -
63. CR388163.1 ENSDARG00000096928 5 1 1.000 - - - - - - - -
64. ENSDARG00000089996 ENSDARG00000089996 17 1 1.000 - - - - - - - -
65. CABZ01054405.2 CABZ01054405.2 46 1 1.000 - - - - - - - -
66. il34 ENSDARG00000091003 14 1 1.000 - - - - - - - - interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
67. ZNF70_14 ZNF70_14 19 1 1.000 - - - - - - - -
68. zgc:136930 ENSDARG00000055192 1208 1 1.000 - - - - - - - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
69. cyp46a2 cyp46a2 38 1 1.000 - - - - - - - -
70. si:dkey-57c22.1 ENSDARG00000093846 12 1 1.000 - - - - - - - - si:dkey-57c22.1 [Source:ZFIN;Acc:ZDB-GENE-110914-164]
71. FP245525.1 FP245525.1 3 1 1.000 - - - - - - - -
72. SLC4A8 ENSDARG00000015531 16 1 1.000 - - - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
73. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 1 1.000 - - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
74. klc1a ENSDARG00000009796 10 1 1.000 - - - - - - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
75. si:dkey-151g22.1 ENSDARG00000098452 1 1 1.000 - - - - - - - - si:dkey-151g22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-115]
76. ATG4D_1 ATG4D_1 1 1 1.000 - - - - - - - -
77. si:dkey-19n13.5 si:dkey-19n13.5 36 1 1.000 - - - - - - - -
78. si:dkey-148b12.4 si:dkey-148b12.4 2 1 1.000 - - - - - - - -
79. irf1b ENSDARG00000043249 30 1 1.000 - - - - - - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
80. THSD7B THSD7B 15 1 1.000 - - - - - - - -
81. lcp2a ENSDARG00000055955 23 1 1.000 - - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
82. CR478286.1 CR478286.1 3 1 1.000 - - - - - - - -
83. capn3a ENSDARG00000041864 89 1 1.000 - - - - - - - - calpain 3a, (p94) [Source:ZFIN;Acc:ZDB-GENE-040912-97]
84. si:ch1073-416j23.1 ENSDARG00000055934 4 1 1.000 - - - - - - - - si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
85. CDH18 ENSDARG00000102769 4 1 1.000 - - - - - - - - cadherin 18 [Source:HGNC Symbol;Acc:HGNC:1757]
86. CABZ01112732.1 ENSDARG00000068453 4 1 1.000 - - - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
87. si:dkey-253d23.8 ENSDARG00000094427 26 0.998 - - - - 0.998 - - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
88. U5_2 U5_2 1 0.99 - - - - - - - - 0.990
89. BX511006.2 BX511006.2 29 0.989 - - - - 0.989 - - - -
90. crygm2d16 ENSDARG00000076790 129 0.989 - - - - 0.989 - - - - crystallin, gamma M2d16 [Source:ZFIN;Acc:ZDB-GENE-071004-53]
91. si:ch73-381a20.2 si:ch73-381a20.2 11 0.984 0.984 - - - - - - - -
92. purg ENSDARG00000099187, ENSDARG00000114450 33 0.984 0.984 - - - - - - - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
93. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 0.983 - - - - 0.983 - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
94. si:ch211-234p6.9 ENSDARG00000095730 3 0.983 - - - - 0.983 - - - - si:ch211-234p6.9 [Source:ZFIN;Acc:ZDB-GENE-060503-33]
95. plac8.2 ENSDARG00000094438 3 0.983 - - - - 0.983 - - - - placenta-specific 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070424-12]
96. rargb ENSDARG00000054003 7 0.983 - - - - 0.983 - - - - retinoic acid receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-070314-1]
97. ghrh ENSDARG00000069481, ENSDARG00000111551 9 0.983 - - - - 0.983 - - - - growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
98. b3gnt7 ENSDARG00000038489 29 0.983 - - - - 0.983 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-021210-4]
99. si:dkeyp-9d4.2 ENSDARG00000029720 9 0.983 - - - - 0.983 - - - - si:dkeyp-9d4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-156]
100. si:dkeyp-72h1.1 ENSDARG00000095347 7 0.983 - - - - 0.983 - - - - si:dkeyp-72h1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-447]

There are 485 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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