Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rad50

Gene Name Gene ID Reads Annotation
rad50 ENSDARG00000038917 1105 RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]










Genes with expression patterns similar to rad50

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rad50 ENSDARG00000038917 1105 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
2. ppm1la ENSDARG00000063218 2142 1.995 0.998 - - - 0.997 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
3. sdad1 ENSDARG00000105117 2819 1.882 - - - - 0.993 - 0.889 - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
4. lin52 ENSDARG00000070833 2271 1.855 0.996 - - - - - 0.859 - - lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
5. ppm1k ENSDARG00000010655 1285 1.801 0.999 - - - - - 0.802 - - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
6. tmeff1b ENSDARG00000056740 11253 1.8 0.991 - - - 0.809 - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
7. h2afva ENSDARG00000068820 16427 1.786 0.940 - - - 0.846 - - - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
8. cox6c ENSDARG00000038577 16845 1.77 0.913 - - - 0.857 - - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
9. vac14 ENSDARG00000014303 941 1.749 0.989 - - - - - 0.760 - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
10. gorasp2 ENSDARG00000015126 3923 1.723 - - - - 0.983 - 0.740 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
11. cdk6 ENSDARG00000070228 1778 1.717 - 0.727 - - 0.990 - - - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
12. metap2b_1 ENSDARG00000102571 5507 1.712 0.838 - - - 0.874 - - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
13. hbae1_1 37308 1.7 0.983 0.717 - - - - - - - hemoglobin, alpha embryonic 1
14. tead1a ENSDARG00000028159 3574 1.695 - 0.710 - - 0.985 - - - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
15. entpd6 ENSDARG00000008757, ENSDARG00000111982 1397 1.691 0.990 - - - - - 0.701 - - ectonucleoside triphosphate diphosphohydrolase 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-050417-412]
16. NFATC2 NFATC2 88 1.645 - 0.770 - - - - 0.875 - -
17. CU467832.1 CU467832.1 635 1.593 - 0.705 - - - - 0.888 - -
18. sp5l ENSDARG00000115868 361 1.525 - 0.792 - - - 0.733 - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
19. ror1 ENSDARG00000015176 378 1.419 - - - - - 0.717 0.702 - - receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
20. mycla ENSDARG00000006003 1866 1 1.000 - - - - - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
21. CDIP1 ENSDARG00000076118 1294 1 1.000 - - - - - - - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
22. ZNF385C ENSDARG00000058154 478 1 1.000 - - - - - - - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
23. si:dkey-4c15.19 si:dkey-4c15.19 219 1 1.000 - - - - - - - -
24. dync1li1 ENSDARG00000098317 729 1 1.000 - - - - - - - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
25. HAUS8 HAUS8 625 1 1.000 - - - - - - - -
26. kat2a ENSDARG00000104734 802 1 1.000 - - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
27. baz1a ENSDARG00000063233, ENSDARG00000099745 563 1 1.000 - - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
28. dhrs7c dhrs7c 1173 1 1.000 - - - - - - - -
29. foxj1b ENSDARG00000088290 343 1 1.000 - - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
30. FAM210B ENSDARG00000052638 1755 0.999 0.999 - - - - - - - - family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
31. MEX3D MEX3D 293 0.999 - - - - 0.999 - - - -
32. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.999 0.999 - - - - - - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
33. stk25a ENSDARG00000002210 372 0.999 0.999 - - - - - - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
34. mpp7 mpp7 743 0.999 0.999 - - - - - - - -
35. ZBTB22 ZBTB22 1053 0.999 - - - - 0.999 - - - -
36. gtf2a1 ENSDARG00000011000 2026 0.999 0.999 - - - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
37. e2f5 ENSDARG00000038812 388 0.999 - - - - 0.999 - - - - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
38. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 0.999 0.999 - - - - - - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
39. hmgcrb ENSDARG00000105206 2080 0.999 0.999 - - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
40. cx35.4 ENSDARG00000042866 685 0.999 0.999 - - - - - - - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
41. CT955984.1 ENSDARG00000113577 1482 0.999 0.999 - - - - - - - -
42. nktr ENSDARG00000059097 1998 0.999 0.999 - - - - - - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
43. d2hgdh ENSDARG00000060210 362 0.999 - - - - 0.999 - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
44. sf3b4 ENSDARG00000018574 7470 0.999 0.999 - - - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
45. pon2 ENSDARG00000016856 1382 0.999 0.999 - - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
46. si:ch211-223a21.1 ENSDARG00000098892 306 0.999 - - - - 0.999 - - - - si:ch211-223a21.1 [Source:ZFIN;Acc:ZDB-GENE-110913-137]
47. dnttip2 ENSDARG00000057648 2381 0.998 0.998 - - - - - - - - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
48. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.998 - - - - 0.998 - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
49. dlgap5 ENSDARG00000045167, ENSDARG00000109645 1466 0.998 0.998 - - - - - - - - discs, large (Drosophila) homolog-associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-040912-160]
50. CCDC106 CCDC106 1908 0.998 - - - - 0.998 - - - -
51. ftsjd2 ftsjd2 2694 0.998 - - - - 0.998 - - - -
52. ift140 ENSDARG00000031886 573 0.998 - - - - 0.998 - - - - intraflagellar transport 140 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040724-165]
53. qpctla ENSDARG00000061691 869 0.998 0.998 - - - - - - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
54. zgc:66443 ENSDARG00000057707 624 0.998 - - - - 0.998 - - - - zgc:66443 [Source:ZFIN;Acc:ZDB-GENE-040426-2945]
55. scocb ENSDARG00000002217 1844 0.998 - - - - 0.998 - - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
56. adkb ENSDARG00000095947 990 0.998 0.998 - - - - - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
57. TIMM21 ENSDARG00000071594 722 0.998 - - - - 0.998 - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
58. rc3h1 rc3h1 1087 0.998 - - - - 0.998 - - - -
59. zfand5b ENSDARG00000002271 4145 0.998 0.998 - - - - - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
60. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.998 0.998 - - - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
61. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 0.998 - - - - 0.998 - - - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
62. sptlc2a ENSDARG00000018976 937 0.998 - - - - 0.998 - - - - serine palmitoyltransferase, long chain base subunit 2a [Source:ZFIN;Acc:ZDB-GENE-050522-23]
63. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.998 0.998 - - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
64. ppapdc1b ppapdc1b 2866 0.998 0.998 - - - - - - - -
65. hsf2 ENSDARG00000053097 1188 0.998 - - - - 0.998 - - - - heat shock transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-011128-1]
66. mpi ENSDARG00000030786 3052 0.998 0.998 - - - - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
67. si:ch211-132g1.3 ENSDARG00000089477 769 0.998 - - - - 0.998 - - - - si:ch211-132g1.3 [Source:ZFIN;Acc:ZDB-GENE-090312-148]
68. si:ch211-10d23.5 ENSDARG00000095510 2632 0.997 0.997 - - - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
69. kidins220b ENSDARG00000017338 1937 0.997 - - - - 0.997 - - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
70. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.997 - - - - 0.997 - - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
71. lta4h ENSDARG00000006029, ENSDARG00000112240 3146 0.997 0.997 - - - - - - - - leukotriene A4 hydrolase [Source:ZFIN;Acc:ZDB-GENE-040426-2477]
72. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 0.997 0.997 - - - - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
73. C7H4orf48 C7H4orf48 1455 0.997 - - - - 0.997 - - - -
74. lppr3a lppr3a 1294 0.997 - - - - 0.997 - - - -
75. knop1 ENSDARG00000077721 2198 0.997 0.997 - - - - - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
76. SRR SRR 544 0.997 - - - - 0.997 - - - -
77. parp12b ENSDARG00000057974, ENSDARG00000115844 1435 0.997 - - - - 0.997 - - - - poly (ADP-ribose) polymerase family, member 12b [Source:ZFIN;Acc:ZDB-GENE-030131-2617]
78. drgx ENSDARG00000069329 610 0.997 - - - - 0.997 - - - - dorsal root ganglia homeobox [Source:ZFIN;Acc:ZDB-GENE-070330-1]
79. nxf1 ENSDARG00000055076 3251 0.997 0.997 - - - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
80. CABZ01076275.1 ENSDARG00000100753 5137 0.997 - - - - 0.997 - - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
81. ppp1cc 2361 0.997 0.997 - - - - - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
82. rab14 ENSDARG00000074246 4084 0.997 0.997 - - - - - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
83. anapc10 ENSDARG00000090152 1406 0.997 - - - - 0.997 - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
84. nrg1 ENSDARG00000104314 1081 0.997 0.997 - - - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
85. syf2 ENSDARG00000004706 2463 0.997 0.997 - - - - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
86. dab2 ENSDARG00000031761 2000 0.997 0.997 - - - - - - - - Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040303-1]
87. chd2 ENSDARG00000060687 3832 0.997 - - - - 0.997 - - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
88. NUAK1_1 NUAK1_1 1782 0.997 0.997 - - - - - - - -
89. apaf1 ENSDARG00000021239 1185 0.996 0.996 - - - - - - - - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
90. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 0.996 - - - - 0.996 - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
91. dgkh ENSDARG00000018716 795 0.996 - - - - 0.996 - - - - diacylglycerol kinase, eta [Source:ZFIN;Acc:ZDB-GENE-070912-328]
92. cicb ENSDARG00000055502 1356 0.996 - - - - 0.996 - - - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
93. zgc:100919 zgc:100919 7746 0.996 0.996 - - - - - - - -
94. MAP4_1 MAP4_1 1153 0.996 - - - - 0.996 - - - -
95. hnrnpua ENSDARG00000015206 4012 0.996 0.996 - - - - - - - - heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
96. rnd3b ENSDARG00000007396 881 0.996 0.996 - - - - - - - - Rho family GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-040718-331]
97. cdc26 ENSDARG00000077815, ENSDARG00000115575 1460 0.996 - - - - 0.996 - - - - cell division cycle 26 homolog [Source:ZFIN;Acc:ZDB-GENE-040822-18]
98. acsbg2 ENSDARG00000004094 2445 0.996 0.996 - - - - - - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]
99. csde1_1 ENSDARG00000074758 2759 0.996 0.996 - - - - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
100. sas sas 1783 0.996 0.996 - - - - - - - -

There are 840 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA