Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rad23b

Gene Name Gene ID Reads Annotation
rad23b ENSDARG00000021550 2575 RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]










Genes with expression patterns similar to rad23b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rad23b ENSDARG00000021550 2575 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
2. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 1.982 - - 0.995 - 0.987 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
3. btg2 ENSDARG00000020298 6616 1.893 - - 0.980 - 0.913 - - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
4. gnb4b ENSDARG00000115383 7457 1.818 - - 0.988 - 0.830 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
5. kctd9 kctd9 973 1.75 - 0.762 - - 0.988 - - - -
6. NDST1 NDST1 1584 1.71 - 0.722 - - 0.988 - - - -
7. taok2b_1 ENSDARG00000100620 2082 1.702 - - 0.994 - - 0.708 - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
8. gapdhs ENSDARG00000039914 8760 1.647 - 0.763 - - 0.884 - - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
9. serbp1a ENSDARG00000074242 10818 1.639 - - 0.932 - - 0.707 - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
10. ube2e1 ENSDARG00000116649 10656 1.638 - 0.795 - - 0.843 - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
11. apex1 ENSDARG00000045843 6345 1.62 - - - - 0.910 - 0.710 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
12. rps11 ENSDARG00000053058 16233 1.594 - - - - 0.860 0.734 - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
13. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.577 - 0.742 - - 0.835 - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
14. FNBP4 ENSDARG00000051800 2839 1.544 - 0.770 - - - - - 0.774 - formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
15. waca ENSDARG00000012577 1794 1.498 - - - 0.745 - - - 0.753 - WW domain containing adaptor with coiled-coil a [Source:ZFIN;Acc:ZDB-GENE-030131-2624]
16. rassf1 ENSDARG00000004840 1248 1.493 0.736 - - 0.757 - - - - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
17. syncrip ENSDARG00000040184 24690 1.469 - - 0.736 - 0.733 - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
18. fbxo8 ENSDARG00000007477 603 1.468 - - - - - 0.726 0.742 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
19. CABZ01087568.1 CABZ01087568.1 1487 1.443 - 0.719 - - - 0.724 - - -
20. SPAG5 SPAG5 1117 1.417 - 0.705 - - - - 0.712 - -
21. pgam5 ENSDARG00000035608 4044 0.996 - - 0.996 - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
22. GSG2 GSG2 1162 0.995 - - 0.995 - - - - - -
23. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 0.995 - - 0.995 - - - - - - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
24. ptbp2a ENSDARG00000101947 1921 0.995 - - 0.995 - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
25. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.995 - - 0.995 - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
26. hmbox1a ENSDARG00000027082 2569 0.995 - - 0.995 - - - - - - homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
27. dnajc2 ENSDARG00000070477 902 0.995 - - 0.995 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
28. trps1 ENSDARG00000104082 918 0.995 - - 0.995 - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
29. suz12a ENSDARG00000070256 2229 0.995 - - 0.995 - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
30. FUZ ENSDARG00000079730 821 0.995 - - 0.995 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
31. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 0.995 - - 0.995 - - - - - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
32. map3k3 ENSDARG00000060348 1482 0.995 - - 0.995 - - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
33. PYURF ENSDARG00000045773 4576 0.995 - - 0.995 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
34. pde12 ENSDARG00000030964 615 0.995 - - 0.995 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
35. eif3k ENSDARG00000068289 1102 0.995 - - 0.995 - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
36. lmx1bb ENSDARG00000068365 627 0.995 - - 0.995 - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
37. brd8 ENSDARG00000025071 2605 0.995 - - 0.995 - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
38. rnmt ENSDARG00000070553 1743 0.995 - - 0.995 - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
39. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.995 - - 0.995 - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
40. poc5 ENSDARG00000059982 569 0.995 - - 0.995 - - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
41. si:ch211-10d23.5 ENSDARG00000095510 2632 0.995 - - 0.995 - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
42. CABZ01034082.1 ENSDARG00000099583 2237 0.995 - - 0.995 - - - - - -
43. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.995 - - 0.995 - - - - - - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
44. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.995 - - 0.995 - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
45. fam118b ENSDARG00000078983 1822 0.995 - - 0.995 - - - - - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
46. zdhhc6 ENSDARG00000075721 1494 0.994 - - 0.994 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
47. slc39a10 ENSDARG00000005823 2634 0.994 - - 0.994 - - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
48. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.994 - - 0.994 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
49. tbp ENSDARG00000014994 1591 0.994 - - 0.994 - - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
50. aup1 ENSDARG00000092609 2431 0.994 - - 0.994 - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
51. DACT3_1 DACT3_1 1235 0.994 - - 0.994 - - - - - -
52. METTL18 ENSDARG00000074588 918 0.994 - - 0.994 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
53. sh3bgrl3 ENSDARG00000098075 3071 0.994 - - 0.994 - - - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
54. rab35 rab35 1287 0.994 - - 0.994 - - - - - -
55. egr2a ENSDARG00000044098 1101 0.994 - - 0.994 - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
56. ddx3 ddx3 4076 0.994 - - 0.994 - - - - - -
57. wnt7bb ENSDARG00000071107 1158 0.994 - - 0.994 - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
58. slc4a2b ENSDARG00000052330 1900 0.994 - - 0.994 - - - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
59. pip5k2 pip5k2 5743 0.994 - - 0.994 - - - - - -
60. cops5 ENSDARG00000057624 1485 0.994 - - 0.994 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
61. AL772300.3 AL772300.3 1752 0.994 - - 0.994 - - - - - -
62. lipg ENSDARG00000031044 1516 0.994 - - 0.994 - - - - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
63. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.994 - - 0.994 - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
64. serpine2 ENSDARG00000029353 2274 0.994 - - 0.994 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
65. rad54l ENSDARG00000018623 837 0.994 - - 0.994 - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
66. dnmt1 ENSDARG00000030756 2741 0.994 - - 0.994 - - - - - - DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
67. hyi ENSDARG00000030166 1199 0.994 - - 0.994 - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
68. si:ch211-266d19.4 ENSDARG00000012642 1251 0.994 - - 0.994 - - - - - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
69. C5H2orf68 C5H2orf68 849 0.994 - - 0.994 - - - - - -
70. cdk2 ENSDARG00000026577 2835 0.993 - - 0.993 - - - - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
71. abca3b ENSDARG00000100524 2416 0.993 - - 0.993 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
72. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 0.993 - - 0.993 - - - - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
73. psma6b ENSDARG00000013966 4410 0.993 - - 0.993 - - - - - - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
74. sypl2b ENSDARG00000000690 2006 0.993 - - 0.993 - - - - - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
75. clic4 ENSDARG00000022995 6064 0.992 - - 0.992 - - - - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
76. appb ENSDARG00000055543, ENSDARG00000109552 4461 0.991 - - - - 0.991 - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
77. ENSDARG00000087348 ENSDARG00000087348 2870 0.991 - - 0.991 - - - - - -
78. zfyve21 ENSDARG00000027887 1687 0.99 - - - - 0.990 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
79. st3gal4 ENSDARG00000041006 636 0.99 - - - - 0.990 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
80. zgc:162816 ENSDARG00000070416 974 0.99 - - - - 0.990 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
81. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 0.99 - - - - 0.990 - - - -
82. tle2 5014 0.99 - - 0.990 - - - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
83. si:dkey-20i20.2 ENSDARG00000071719 659 0.99 - - - - 0.990 - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
84. reep3l reep3l 608 0.99 - - - - 0.990 - - - -
85. CR954963.1 ENSDARG00000097153 1135 0.99 - - - - 0.990 - - - -
86. rnf11a ENSDARG00000010442 592 0.989 - - - - 0.989 - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
87. shisa3 ENSDARG00000075467 485 0.989 - - - - 0.989 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
88. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.989 - - - - 0.989 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
89. ndufv3 ENSDARG00000090389 4829 0.989 - - 0.989 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
90. bag1 ENSDARG00000020895 1660 0.989 - - - - 0.989 - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
91. msxc msxc 3142 0.989 - - 0.989 - - - - - -
92. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.989 - - - - 0.989 - - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
93. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.989 - - - - 0.989 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
94. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.989 - - - - 0.989 - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
95. ccdc19 ccdc19 495 0.989 - - - - 0.989 - - - -
96. nrbp1 ENSDARG00000056089, ENSDARG00000114035 1738 0.989 - - - - 0.989 - - - - nuclear receptor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-146]
97. pou4f1 ENSDARG00000005559 821 0.989 - - - - 0.989 - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
98. rasl11a ENSDARG00000046013 1627 0.989 - - - - 0.989 - - - - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
99. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.989 - - - - 0.989 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
100. commd3 ENSDARG00000045402 1601 0.989 - - - - 0.989 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]

There are 884 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA