Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rad18

Gene Name Gene ID Reads Annotation
rad18 ENSDARG00000027938 574 RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]










Genes with expression patterns similar to rad18

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rad18 ENSDARG00000027938 574 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
2. foxd1 ENSDARG00000029179 726 2.673 - 0.894 0.995 0.784 - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
3. fastkd1 ENSDARG00000056128 141 2.558 - - - 0.859 - 0.897 0.802 - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
4. s100a1 ENSDARG00000015543 274 2.507 - 0.749 0.994 - - - 0.764 - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
5. SUOX ENSDARG00000091574 122 2.318 - - - - - 0.749 0.788 0.781 - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
6. ek1 ENSDARG00000020080 742 1.882 - 0.895 0.987 - - - - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
7. tmem205 ENSDARG00000100677 101 1.871 - - - - - 0.908 0.963 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
8. prr18 ENSDARG00000093768 409 1.871 - - 0.995 0.876 - - - - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
9. exosc6 ENSDARG00000036060, ENSDARG00000115735 531 1.823 - 0.839 0.984 - - - - - - exosome component 6 [Source:ZFIN;Acc:ZDB-GENE-050522-362]
10. TMEM30B ENSDARG00000054122 1519 1.819 - - 0.972 - - - 0.847 - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
11. stxbp1a ENSDARG00000001994 5154 1.813 - 0.872 0.941 - - - - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
12. tmem194b tmem194b 724 1.808 - - 0.997 0.811 - - - - -
13. tgm5l ENSDARG00000098837 174 1.8 - - - - - 0.870 0.930 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
14. hrasb ENSDARG00000005651 662 1.795 - - 0.989 - - - - 0.806 - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
15. CREB3L4 1085 1.793 - - 0.985 - - 0.808 - - - cAMP responsive element binding protein 3-like 4
16. CABZ01073740.1 CABZ01073740.1 27 1.787 - - - - - 0.945 - 0.842 -
17. ARHGAP22 ENSDARG00000076434 1406 1.786 - 0.800 0.986 - - - - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
18. hopx ENSDARG00000089368 2342 1.771 - - 0.983 - - - 0.788 - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
19. si:ch211-219f7.3 si:ch211-219f7.3 48 1.751 - - - - - 0.957 0.794 - -
20. phf3 ENSDARG00000034768 1372 1.749 - - 0.977 - - - 0.772 - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
21. nudt22 ENSDARG00000071671 411 1.746 - - - 0.835 - 0.911 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
22. rnf121 ENSDARG00000060282 1809 1.745 - - 0.955 0.790 - - - - - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
23. cry5 ENSDARG00000019498 90 1.731 0.764 - - - - 0.967 - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
24. egfl6 ENSDARG00000045958 335 1.73 - - - 0.857 - - 0.873 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
25. wu:fb52c12 wu:fb52c12 763 1.729 - - 0.990 - - 0.739 - - -
26. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.727 - - 0.987 - - - 0.740 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
27. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.726 - - 0.988 - - - 0.738 - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
28. yaf2 ENSDARG00000015966 1905 1.726 - - 0.984 - - - 0.742 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
29. si:dkey-152b24.7 ENSDARG00000099715 26 1.723 - - - - - 0.895 - 0.828 - si:dkey-152b24.7 [Source:ZFIN;Acc:ZDB-GENE-100921-77]
30. ZFAT ENSDARG00000077987 205 1.711 - - - 0.906 - 0.805 - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
31. zgc:195001 ENSDARG00000070484 3281 1.709 - 0.717 0.992 - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
32. slc24a5 ENSDARG00000024771 107 1.708 - 0.963 - - - - - 0.745 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-031210-1]
33. nlk1 ENSDARG00000006566 1123 1.706 - - 0.993 0.713 - - - - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
34. esyt1a ENSDARG00000034714 129 1.699 - - - - - 0.896 - 0.803 - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
35. med21 ENSDARG00000026839 1083 1.699 - - 0.986 - - - - 0.713 - mediator complex subunit 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2763]
36. hes6 ENSDARG00000019335 4754 1.698 - 0.756 0.942 - - - - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
37. BX088711.1 BX088711.1 125 1.697 - 0.915 - - - - 0.782 - -
38. nes ENSDARG00000088805 2710 1.697 - 0.812 0.885 - - - - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
39. trim25l ENSDARG00000020863 292 1.695 - - - - - 0.966 0.729 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
40. gng13b ENSDARG00000037921 215 1.692 - - - 0.902 - 0.790 - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
41. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.692 0.756 - 0.936 - - - - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
42. kcnh6 kcnh6 59 1.69 - - - 0.902 - - 0.788 - -
43. extl2 ENSDARG00000063191 118 1.687 - - - 0.896 - - 0.791 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
44. tmem50a ENSDARG00000015757 3244 1.685 - - 0.980 - - - 0.705 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
45. poc1bl ENSDARG00000012745 2451 1.681 - - 0.955 - - - 0.726 - - POC1 centriolar protein homolog B (Chlamydomonas), like [Source:ZFIN;Acc:ZDB-GENE-050306-41]
46. CABZ01084007.1 CABZ01084007.1 199 1.677 - - - 0.841 - 0.836 - - -
47. heca ENSDARG00000042877 200 1.672 - 0.804 - 0.868 - - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
48. usp11 ENSDARG00000076303 183 1.67 - - - - - 0.931 0.739 - - ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
49. has2 ENSDARG00000036987 349 1.669 - - - - - 0.890 - 0.779 - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
50. asb4 ENSDARG00000034988 1115 1.669 - - - 0.864 - - - 0.805 - ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
51. pigu ENSDARG00000075530 348 1.668 - - - 0.822 - - - 0.846 - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
52. ccdc85ca ENSDARG00000005232 3218 1.665 0.711 - 0.954 - - - - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
53. GALNT3 ENSDARG00000108649 356 1.66 - - - 0.865 - - 0.795 - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
54. zgc:174651 zgc:174651 90 1.657 - - - - - 0.925 0.732 - -
55. AREL1 ENSDARG00000100359 260 1.655 - - - 0.856 - - - 0.799 - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
56. si:ch211-274p24.5 si:ch211-274p24.5 122 1.654 - 0.772 - 0.882 - - - - -
57. cttnbp2nl cttnbp2nl 166 1.65 - 0.863 - - - - - 0.787 -
58. si:ch1073-263o8.2 ENSDARG00000090870 66 1.646 - - - - - 0.945 - 0.701 - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
59. phf23b ENSDARG00000036305 1073 1.64 - 0.829 - 0.811 - - - - - PHD finger protein 23b [Source:ZFIN;Acc:ZDB-GENE-030131-5895]
60. zgc:113162 ENSDARG00000052923 62 1.631 - - - - - 0.809 - 0.822 - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
61. mon1a ENSDARG00000078585 554 1.631 - - - 0.731 - - 0.900 - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
62. si:ch211-284o19.8 ENSDARG00000053836 43 1.627 - - - - - 0.829 0.798 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
63. wdr35 ENSDARG00000069269 492 1.622 - - - - - 0.817 - 0.805 - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
64. si:dkeyp-69b9.3 ENSDARG00000088881 109 1.615 0.782 0.833 - - - - - - - si:dkeyp-69b9.3 [Source:ZFIN;Acc:ZDB-GENE-100922-275]
65. pigs ENSDARG00000017813 718 1.61 - - - - - - 0.758 0.852 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
66. traf6 ENSDARG00000028058 478 1.599 - - - 0.862 - - - 0.737 - TNF receptor-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5735]
67. mmp9 ENSDARG00000042816 298 1.594 - - - - - 0.856 0.738 - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
68. dnm1b ENSDARG00000009281 219 1.59 - 0.725 - 0.865 - - - - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
69. si:ch211-179l5.5 si:ch211-179l5.5 249 1.588 - - - - - 0.750 0.838 - -
70. si:dkey-43f9.4 si:dkey-43f9.4 180 1.584 - - - 0.866 - - 0.718 - -
71. ARHGEF15 ENSDARG00000100293 553 1.581 - - - 0.826 - - - 0.755 - Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
72. chst3a ENSDARG00000061070 127 1.579 - 0.820 - - - - - 0.759 - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
73. si:dkey-4c15.16 ENSDARG00000097261 154 1.575 - - - - - 0.797 0.778 - - si:dkey-4c15.16 [Source:ZFIN;Acc:ZDB-GENE-050420-215]
74. tnika ENSDARG00000056218 728 1.575 - 0.849 - 0.726 - - - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
75. limk1b ENSDARG00000003022 172 1.575 - - - 0.818 - 0.757 - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
76. hsdl1 ENSDARG00000041736 171 1.574 - - - - - 0.846 0.728 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
77. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.568 - - - - - - 0.861 0.707 - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
78. ncdn ENSDARG00000098544 267 1.565 - - - 0.821 - - 0.744 - - neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
79. FAM3D ENSDARG00000091625 1392 1.563 - - - - - 0.749 0.814 - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
80. nadka_1 ENSDARG00000006577, ENSDARG00000098313 544 1.558 - - - 0.715 - 0.843 - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
81. mlec ENSDARG00000059630 2057 1.55 - - - - - 0.717 0.833 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
82. pdpk1a ENSDARG00000062304 213 1.547 - - - - - - 0.785 0.762 - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
83. pold3 ENSDARG00000076169 694 1.542 - 0.731 - - - 0.811 - - - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
84. si:ch211-135f11.1 166 1.539 - - - - - - 0.790 0.749 - si:ch211-135f11.1, transcript variant X3
85. ndst2a ENSDARG00000086269 754 1.534 - - - - - 0.779 0.755 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
86. trpv6 ENSDARG00000014496, ENSDARG00000110671 128 1.532 - 0.813 - - - - 0.719 - - transient receptor potential cation channel, subfamily V, member 6 [Source:ZFIN;Acc:ZDB-GENE-040624-12]
87. limk1a ENSDARG00000103467 97 1.531 - 0.758 - - - - 0.773 - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
88. TPMT TPMT 138 1.531 - - - - - 0.810 0.721 - -
89. zgc:111974 zgc:111974 1386 1.531 - - - 0.826 - - 0.705 - -
90. spint1b ENSDARG00000012467 97 1.53 - - - - - 0.775 0.755 - - serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
91. edem2 ENSDARG00000028448 236 1.524 - - - - - 0.742 - 0.782 - ER degradation enhancer, mannosidase alpha-like 2 [Source:ZFIN;Acc:ZDB-GENE-060519-1]
92. si:ch211-121j5.2 si:ch211-121j5.2 86 1.524 - 0.765 - - - - 0.759 - -
93. ZBTB11 ENSDARG00000017886 817 1.513 - - - 0.764 - - 0.749 - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
94. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.504 - - - - - 0.738 0.766 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
95. prc1b ENSDARG00000005993 780 1.502 0.743 - - - - 0.759 - - - protein regulator of cytokinesis 1b [Source:ZFIN;Acc:ZDB-GENE-040426-777]
96. PRKD3 ENSDARG00000079967 192 1.499 - 0.745 - - - 0.754 - - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
97. rfc5 ENSDARG00000035634 974 1.498 - 0.796 - - - - 0.702 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
98. bloc1s1 ENSDARG00000014171 597 1.497 - - - 0.745 - - - 0.752 - biogenesis of lysosomal organelles complex-1, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050208-569]
99. si:dkey-229b18.3 ENSDARG00000095912 568 1.485 - - - 0.714 - - - 0.771 - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
100. tmem161b ENSDARG00000055989 680 1.484 - - - 0.738 - 0.746 - - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]

There are 1883 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA