Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rad1

Gene Name Gene ID Reads Annotation
rad1 ENSDARG00000040559 750 RAD1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-1873]










Genes with expression patterns similar to rad1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rad1 ENSDARG00000040559 750 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAD1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-1873]
2. C9H2orf49 C9H2orf49 258 1.648 - 0.835 - - - - 0.813 - -
3. cables2b ENSDARG00000017154 131 1.632 - - - - - 0.845 0.787 - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
4. si:dkey-22i16.3 34 1.62 0.802 0.818 - - - - - - - si:dkey-22i16.3
5. ccdc59 ENSDARG00000045755 297 1.603 - - - - - 0.870 0.733 - - coiled-coil domain containing 59 [Source:ZFIN;Acc:ZDB-GENE-041210-91]
6. C5HXorf56 C5HXorf56 880 1.545 - - - 0.811 - - 0.734 - -
7. slc25a32a ENSDARG00000089791 511 1.542 - - - - - - 0.798 - 0.744 solute carrier family 25 (mitochondrial folate carrier), member 32a [Source:ZFIN;Acc:ZDB-GENE-040426-758]
8. nktr ENSDARG00000059097 1998 1.529 - - - 0.766 - - 0.763 - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
9. ddx27 ENSDARG00000091831 1471 1.519 0.724 - - 0.795 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
10. CR788231.1 CR788231.1 61 1.511 - 0.711 - - - 0.800 - - -
11. PSMG4 1007 1.506 - 0.736 - 0.770 - - - - - proteasome (prosome, macropain) assembly chaperone 4
12. tubg1 ENSDARG00000015610 2433 1.49 - - 0.754 - - - 0.736 - - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
13. spata2l ENSDARG00000068814 152 1.484 - 0.708 - - - 0.776 - - - spermatogenesis associated 2-like [Source:ZFIN;Acc:ZDB-GENE-070705-402]
14. tdp1 ENSDARG00000073866 214 1.481 - - - - - 0.700 - - 0.781 tyrosyl-DNA phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-090909-1]
15. si:dkey-15h14.4 si:dkey-15h14.4 118 1.478 0.769 - - - - - 0.709 - -
16. gmeb1 ENSDARG00000062060 456 1.475 - - - - - 0.718 0.757 - - glucocorticoid modulatory element binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-35]
17. zgc:136930 ENSDARG00000055192 1208 1.466 0.750 - - - - - 0.716 - - zgc:136930 [Source:ZFIN;Acc:ZDB-GENE-060312-16]
18. zc3h3 ENSDARG00000090751 206 1.452 0.743 - - - - - - - 0.709 zinc finger CCCH-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9399]
19. CR388095.2 ENSDARG00000117604 76 1.447 - - - - - 0.743 - - 0.704
20. hspa4a ENSDARG00000004754 3439 1.442 - - - - - 0.741 0.701 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
21. CU570983.1 CU570983.1 83 1.427 0.711 - - - - 0.716 - - -
22. park7 ENSDARG00000116835 1229 1.411 - 0.708 - - - - 0.703 - - parkinson protein 7 [Source:ZFIN;Acc:ZDB-GENE-041010-5]
23. si:ch73-234b20.4 112 0.944 - 0.944 - - - - - - - si:ch73-234b20.4, transcript variant X1
24. pip4k2aa ENSDARG00000003776 865 0.928 - - - 0.928 - - - - - phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a [Source:ZFIN;Acc:ZDB-GENE-080721-18]
25. zcchc9 ENSDARG00000007531 1748 0.917 - - - 0.917 - - - - - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
26. FEZ2_1 FEZ2_1 153 0.91 - 0.910 - - - - - - -
27. gpr98 gpr98 717 0.898 - - - 0.898 - - - - -
28. cbx4 ENSDARG00000099441 372 0.896 - - - 0.896 - - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
29. CU467646.1_1 ENSDARG00000075090 128 0.888 - 0.888 - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
30. pde6d ENSDARG00000074892, ENSDARG00000115562, ENSDARG00000115620 506 0.887 - 0.887 - - - - - - - phosphodiesterase 6D, cGMP-specific, rod, delta [Source:ZFIN;Acc:ZDB-GENE-040718-463]
31. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 0.887 - - - 0.887 - - - - - ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
32. cflara ENSDARG00000055966 464 0.874 - - - 0.874 - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
33. zgc:113209 ENSDARG00000100294 176 0.868 - - - - - - 0.868 - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
34. taf9 ENSDARG00000077870 6992 0.866 - - - - - 0.866 - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
35. pwp1 ENSDARG00000015921 1160 0.864 - - - - - - 0.864 - - PWP1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1049]
36. mst4 mst4 1672 0.86 - - - 0.860 - - - - -
37. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.859 - - - 0.859 - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
38. zgc:162945 ENSDARG00000028815, ENSDARG00000116996 439 0.859 - 0.859 - - - - - - - zgc:162945 [Source:ZFIN;Acc:ZDB-GENE-030131-3975]
39. rims3 ENSDARG00000062305 202 0.858 - - - - - - 0.858 - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
40. fadd ENSDARG00000103021 142 0.858 0.858 - - - - - - - - Fas (tnfrsf6)-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-070606-3]
41. zgc:174275 ENSDARG00000099845 172 0.855 0.855 - - - - - - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
42. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 0.855 - - - 0.855 - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
43. gpn2 ENSDARG00000103127 304 0.853 - - - 0.853 - - - - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
44. PGBD4_2 PGBD4_2 184 0.851 - - - - - 0.851 - - -
45. TIAM1 TIAM1 837 0.85 - - - 0.850 - - - - -
46. RPTOR ENSDARG00000098726, ENSDARG00000116019 420 0.849 - 0.849 - - - - - - - regulatory associated protein of MTOR, complex 1 [Source:ZFIN;Acc:ZDB-GENE-130530-685]
47. si:ch211-66k16.20 si:ch211-66k16.20 162 0.849 - 0.849 - - - - - - -
48. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.849 - - - - - - 0.849 - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
49. CABZ01064447.1 CABZ01064447.1 348 0.848 - - - - - 0.848 - - -
50. dpf1 ENSDARG00000099927, ENSDARG00000115986 138 0.847 - - - - - 0.847 - - - D4, zinc and double PHD fingers family 1 [Source:ZFIN;Acc:ZDB-GENE-050913-31]
51. SMARCC2 ENSDARG00000077946 702 0.845 - - - - - - 0.845 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:ZFIN;Acc:ZDB-GENE-100728-1]
52. CABZ01087514.1 ENSDARG00000090861 245 0.844 - 0.844 - - - - - - - peroxisomal membrane protein PMP34-like [Source:NCBI gene;Acc:566378]
53. ppat ENSDARG00000004517 3349 0.844 - - - 0.844 - - - - - phosphoribosyl pyrophosphate amidotransferase [Source:ZFIN;Acc:ZDB-GENE-041210-323]
54. nfatc3b ENSDARG00000051729 239 0.843 - - - - - - 0.843 - - nuclear factor of activated T cells 3b [Source:ZFIN;Acc:ZDB-GENE-100922-25]
55. prkrira 971 0.843 - - - - - - 0.843 - - protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a
56. ubxn7 ENSDARG00000009436 652 0.843 - - - - - - 0.843 - - UBX domain protein 7 [Source:ZFIN;Acc:ZDB-GENE-040704-8]
57. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 0.842 - - - - - 0.842 - - - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
58. BX927290.1 BX927290.1 389 0.841 - - - 0.841 - - - - -
59. si:dkey-188i13.7 ENSDARG00000078389 81 0.84 - 0.840 - - - - - - - si:dkey-188i13.7 [Source:ZFIN;Acc:ZDB-GENE-090312-190]
60. cstf1 ENSDARG00000044820 1663 0.837 - - - - - 0.837 - - - cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
61. ARSB ENSDARG00000108788 774 0.836 - - - 0.836 - - - - - arylsulfatase B [Source:HGNC Symbol;Acc:HGNC:714]
62. ube2t ENSDARG00000063285 716 0.836 - - - - - - 0.836 - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
63. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.832 - 0.832 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
64. ptx3a ENSDARG00000068275 589 0.832 - - - - - 0.832 - - - pentraxin 3, long a [Source:ZFIN;Acc:ZDB-GENE-030131-8720]
65. camk2d1 ENSDARG00000043010 669 0.832 - - - 0.832 - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 1 [Source:ZFIN;Acc:ZDB-GENE-040801-121]
66. zgc:174563_1 zgc:174563_1 146 0.831 - - - - - - 0.831 - -
67. acrc 242 0.831 - - - - - - 0.831 - - acidic repeat containing, transcript variant X3
68. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.831 - - - - - 0.831 - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
69. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 0.83 - - - 0.830 - - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
70. fastkd3 ENSDARG00000100440 144 0.83 - 0.830 - - - - - - - FAST kinase domains 3 [Source:ZFIN;Acc:ZDB-GENE-050208-273]
71. klhl38 klhl38 44 0.83 - 0.830 - - - - - - -
72. snx27b ENSDARG00000016977 2768 0.83 - - - - - - 0.830 - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
73. si:dkey-259p7.1 si:dkey-259p7.1 59 0.829 - - - - - - 0.829 - -
74. WIZ_1 WIZ_1 378 0.827 - - - - - 0.827 - - -
75. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.825 - - - - - 0.825 - - - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
76. si:dkey-102m7.3 ENSDARG00000100366 27 0.824 0.824 - - - - - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
77. PEG3_41 PEG3_41 124 0.824 0.824 - - - - - - - -
78. gatad2ab ENSDARG00000006192 2461 0.824 - - - 0.824 - - - - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
79. CU457778.1 ENSDARG00000098976 38 0.824 0.824 - - - - - - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
80. C19H1orf85 C19H1orf85 1587 0.823 - - - 0.823 - - - - -
81. SEMA4B SEMA4B 1259 0.822 - - - - - 0.822 - - -
82. slc17a9a ENSDARG00000042954 36 0.822 - - - - - - 0.822 - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
83. myo16 ENSDARG00000078582 714 0.822 - 0.822 - - - - - - - myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
84. HECW2 HECW2 691 0.822 - - - - - - 0.822 - -
85. nudcd3 ENSDARG00000098361 538 0.821 - - - - - - 0.821 - - NudC domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2255]
86. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 0.821 - - - - - - 0.821 - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
87. noc3l ENSDARG00000002487 230 0.821 - 0.821 - - - - - - - NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]
88. ablim1a ENSDARG00000060149 228 0.821 - - - - - - 0.821 - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
89. rsad1 ENSDARG00000077698, ENSDARG00000112179 93 0.82 - 0.820 - - - - - - - radical S-adenosyl methionine domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2508]
90. G3BP2_1 G3BP2_1 2390 0.819 - - - 0.819 - - - - -
91. zgc:65997 ENSDARG00000043562, ENSDARG00000114791, ENSDARG00000115351 606 0.819 0.819 - - - - - - - - zgc:65997 [Source:ZFIN;Acc:ZDB-GENE-040426-1502]
92. med13a ENSDARG00000053884, ENSDARG00000112778 931 0.818 - - - - - 0.818 - - - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
93. znf277 ENSDARG00000025346, ENSDARG00000113592 288 0.817 - - - - - 0.817 - - - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
94. ttc1 ENSDARG00000044567 1141 0.817 - - - 0.817 - - - - - tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
95. CABZ01115322.1 CABZ01115322.1 1283 0.816 - - - 0.816 - - - - -
96. WDSUB1 ENSDARG00000090418 357 0.816 - 0.816 - - - - - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
97. gusb ENSDARG00000063126 867 0.816 - - - - - - 0.816 - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
98. fndc5b ENSDARG00000035895 366 0.816 - 0.816 - - - - - - - fibronectin type III domain containing 5b [Source:ZFIN;Acc:ZDB-GENE-060503-916]
99. mob2b ENSDARG00000012005 395 0.814 - 0.814 - - - - - - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
100. sh3glb2a ENSDARG00000008983 452 0.814 - - - - - - 0.814 - - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]

There are 671 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA