Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rac3b

Gene Name Gene ID Reads Annotation
rac3b ENSDARG00000020795 1523 Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]










Genes with expression patterns similar to rac3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rac3b ENSDARG00000020795 1523 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
2. mapta ENSDARG00000089314 2038 2.617 0.752 - - - - 0.898 0.967 - - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
3. znf710a ENSDARG00000014680 582 2.534 - 0.894 - 0.849 - 0.791 - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
4. ARHGAP23 ARHGAP23 3946 2.499 - 0.873 - - - 0.725 0.901 - -
5. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.478 0.749 - - 0.827 - 0.902 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
6. CLIP3 ENSDARG00000054456 734 2.454 0.721 - - 0.824 - 0.909 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
7. si:dkey-100n10.2 101 2.446 0.721 - - 0.820 - 0.905 - - - si:dkey-100n10.2
8. atp6ap1a ENSDARG00000041417 898 2.439 0.729 - - 0.810 - 0.900 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
9. vps39 ENSDARG00000074471 684 2.377 - 0.829 - 0.842 - 0.706 - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
10. ndrg4 ENSDARG00000103937 1234 2.353 0.726 - - 0.818 - 0.809 - - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
11. plp1a ENSDARG00000103732 3544 2.315 0.717 - - 0.706 - 0.892 - - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
12. suv39h1b ENSDARG00000055753 1540 2.29 0.776 - - 0.786 - 0.728 - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
13. bub1bb ENSDARG00000074927 1667 2.242 - 0.833 - 0.702 - 0.707 - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
14. TDG TDG 1191 2.231 - - - 0.700 0.704 0.827 - - -
15. LANCL2 ENSDARG00000045465 1221 2.23 - - - 0.817 - 0.709 - 0.704 - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
16. NTAN1 ENSDARG00000105182 844 1.966 - 0.976 - - - - 0.990 - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
17. myof ENSDARG00000006112 618 1.934 - 0.962 - - - - 0.972 - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
18. kif2c ENSDARG00000076228 2281 1.934 - 0.956 - - - - 0.978 - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
19. ankrd50l ENSDARG00000007077 1115 1.907 - 0.939 - - - - 0.968 - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
20. ca16b ENSDARG00000060123 389 1.883 - 0.961 - - - 0.922 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
21. zdhhc6 ENSDARG00000075721 1494 1.859 - 0.977 - 0.882 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
22. RNF111 ENSDARG00000078802 1357 1.851 - 0.876 - - - - 0.975 - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
23. svopl ENSDARG00000057983, ENSDARG00000116460 975 1.842 - 0.886 - - - - 0.956 - - SVOP-like [Source:ZFIN;Acc:ZDB-GENE-041114-109]
24. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.834 - 0.887 - - - - 0.947 - - glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
25. fbln2 ENSDARG00000015156 1694 1.83 - 0.916 - - - - 0.914 - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
26. tjp2b ENSDARG00000023443 1654 1.827 - 0.922 - - - - 0.905 - - tight junction protein 2b (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-040718-58]
27. timm23 timm23 2712 1.823 - - - 0.836 - - 0.987 - -
28. actr10 ENSDARG00000038432 1598 1.818 - - - - - 0.831 0.987 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
29. tdrd3 ENSDARG00000025421 633 1.817 - 0.966 - 0.851 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
30. AL844567.1 AL844567.1 1605 1.804 - 0.812 - - - - 0.992 - -
31. srrm2 ENSDARG00000037965 1967 1.802 - - - 0.815 - - 0.987 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
32. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 1.799 - - - - - 0.804 0.995 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
33. wdr82 ENSDARG00000014083 3159 1.799 - - - - - 0.831 0.968 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
34. NRBP2 NRBP2 127 1.798 - 0.962 - - - 0.836 - - -
35. laptm4a ENSDARG00000006397 1698 1.797 - 0.805 - - - - 0.992 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
36. ncapg2 ENSDARG00000060023 993 1.797 - - - 0.816 - - 0.981 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
37. phf21ab ENSDARG00000021378 1706 1.796 - 0.810 - - - - 0.986 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
38. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.795 - - - - - 0.800 0.995 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
39. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.779 - - - 0.789 - - 0.990 - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
40. esm1 ENSDARG00000104370 186 1.779 - 0.979 - - - 0.800 - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
41. cxxc1 cxxc1 914 1.778 - 0.877 - 0.901 - - - - -
42. PARD3B PARD3B 401 1.777 - 0.941 - 0.836 - - - - -
43. bbs4 ENSDARG00000063522 247 1.776 - 0.974 - 0.802 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
44. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.767 - - - - - 0.776 0.991 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
45. zic5 ENSDARG00000016022 1034 1.766 - 0.974 - - - 0.792 - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
46. kansl3 ENSDARG00000029556 2487 1.766 - - - - - 0.776 0.990 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
47. cadm1a ENSDARG00000031075 2484 1.759 - - - 0.806 - - 0.953 - - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
48. eny2 ENSDARG00000070046 3741 1.755 0.781 - - - - - 0.974 - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
49. cpsf1 ENSDARG00000034178 2036 1.751 - - - - - 0.768 0.983 - - cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
50. lipf ENSDARG00000018529 1849 1.751 - 0.908 - - - - 0.843 - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
51. lzic ENSDARG00000055899 638 1.745 - - - 0.753 - - 0.992 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
52. st18 663 1.745 - - - 0.822 - 0.923 - - - suppression of tumorigenicity 18, zinc finger
53. epb41l4a ENSDARG00000040087 1013 1.745 - 0.979 - 0.766 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
54. ldb1a ENSDARG00000010137 3035 1.741 - 0.957 - 0.784 - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
55. abcb7 ENSDARG00000062795 1404 1.737 - - - - - 0.782 0.955 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
56. ttc1 ENSDARG00000044567 1141 1.736 - - - 0.750 - - 0.986 - - tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
57. rfc3 ENSDARG00000055969, ENSDARG00000112402 1448 1.731 - 0.969 - - - - - 0.762 - replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]
58. lamb4 ENSDARG00000039133 1220 1.73 - 0.777 - - - - 0.953 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
59. mdkb ENSDARG00000020708 5393 1.726 - - - 0.814 - 0.912 - - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
60. zic1 ENSDARG00000015567 2520 1.712 0.771 - - - - 0.941 - - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
61. aplp1 ENSDARG00000098368 2317 1.711 0.797 - - - - 0.914 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
62. ddb1 ENSDARG00000074431 1054 1.71 - - - 0.722 - - 0.988 - - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
63. casc3 ENSDARG00000029911 1174 1.71 - 0.894 - - - 0.816 - - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
64. plxna4 ENSDARG00000019328 782 1.708 - - - - - 0.713 0.995 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
65. klc2 3058 1.708 - - - 0.719 - - 0.989 - - kinesin light chain 2
66. VPS37B_1 VPS37B_1 1816 1.706 - - - 0.739 - - 0.967 - -
67. eno2 ENSDARG00000014287 2162 1.706 0.807 - - - - 0.899 - - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
68. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.704 - - - - - 0.724 0.980 - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
69. gipc1 ENSDARG00000104483 2913 1.704 - - - 0.814 - 0.890 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
70. usp1 ENSDARG00000056414 1816 1.702 - 0.915 - 0.787 - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
71. uhrf1 ENSDARG00000103409 3282 1.7 - - - - - 0.715 0.985 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
72. fermt1 ENSDARG00000052652 2394 1.697 - 0.826 - - - - 0.871 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
73. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 1.692 - 0.748 - - - - 0.944 - - chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
74. ARFGAP1 ENSDARG00000101616 2952 1.69 - 0.898 - - - 0.792 - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
75. ctdspla ENSDARG00000071673 1447 1.689 - 0.973 - 0.716 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
76. ADAM22 ENSDARG00000060532 2259 1.685 - - - - - 0.881 - 0.804 - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
77. lrrfip2 ENSDARG00000010400 2633 1.684 - 0.893 - 0.791 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
78. C1H10orf12 C1H10orf12 1663 1.683 - - - 0.835 - 0.848 - - -
79. prelid1b ENSDARG00000044169 501 1.682 - 0.905 - - - 0.777 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
80. ccnb1 ENSDARG00000051923 3226 1.681 0.802 0.879 - - - - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
81. KCTD14 ENSDARG00000110240 122 1.677 - 0.941 - - - 0.736 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
82. C19H7orf41 C19H7orf41 2243 1.676 - - - 0.755 - 0.921 - - -
83. atp1b4 ENSDARG00000053262 1337 1.674 - - - 0.758 - 0.916 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
84. CABZ01079427.1 CABZ01079427.1 1682 1.672 - 0.704 - - - - 0.968 - -
85. hspb9 ENSDARG00000078674 2755 1.671 - 0.908 - - - 0.763 - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
86. supt4h1 ENSDARG00000113969 1024 1.67 - - - 0.700 - - 0.970 - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
87. spock2 ENSDARG00000075393 791 1.668 0.761 - - - - 0.907 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
88. CR548630.1 CR548630.1 3301 1.667 - 0.887 - 0.780 - - - - -
89. aldh5a1 ENSDARG00000076544, ENSDARG00000113300 1021 1.665 - - - 0.714 - - 0.951 - - aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]
90. arid1aa ENSDARG00000101710 3644 1.662 - 0.876 - - - 0.786 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
91. sp1 ENSDARG00000088347 1697 1.661 - - - - - 0.700 0.961 - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
92. rgs20 ENSDARG00000038859 331 1.66 - - - 0.777 - 0.883 - - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
93. BX957337.1 BX957337.1 1685 1.658 0.751 - - - - 0.907 - - -
94. FP102071.1 ENSDARG00000097994 170 1.658 0.759 - - - - 0.899 - - - si:ch211-87j1.7 [Source:NCBI gene;Acc:103909886]
95. arhgap11a ENSDARG00000100019 1642 1.657 - 0.881 - - - 0.776 - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
96. sppl2 ENSDARG00000030448 1040 1.653 - 0.878 - - - 0.775 - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
97. TTYH1 ENSDARG00000076804 399 1.652 - - - - - 0.903 - 0.749 - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
98. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.65 - 0.897 - - - 0.753 - - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
99. phf10 ENSDARG00000070084 1210 1.65 - - - 0.837 - 0.813 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
100. snai1a ENSDARG00000056995 1427 1.649 - 0.855 - 0.794 - - - - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]

There are 2552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA