Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rabif

Gene Name Gene ID Reads Annotation
rabif ENSDARG00000002690, ENSDARG00000114340 891 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]










Genes with expression patterns similar to rabif

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rabif ENSDARG00000002690, ENSDARG00000114340 891 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
2. arhgap11a ENSDARG00000100019 1642 2.357 - 0.841 - - - 0.793 0.723 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
3. ndst2a ENSDARG00000086269 754 1.931 - 0.938 - - - - - - 0.993 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
4. exoc3 ENSDARG00000014582, ENSDARG00000114378, ENSDARG00000117037 1155 1.919 - 0.930 - - - - - - 0.989 exocyst complex component 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5947]
5. pou2f1b ENSDARG00000007996 2172 1.859 - 0.889 - - - - - - 0.970 POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
6. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.853 - 0.864 - - - - - - 0.989 RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
7. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.835 - - - - - 0.843 - - 0.992 erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
8. hint2 ENSDARG00000100938 1053 1.795 - 0.804 - - - - - - 0.991 histidine triad nucleotide binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070410-139]
9. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.783 - 0.798 - - - - - - 0.985
10. rcor2 ENSDARG00000008278 1678 1.752 - - - - - 0.788 - - 0.964 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
11. ITPA ENSDARG00000057529 493 1.742 - - - - - 0.751 - - 0.991 inosine triphosphatase (nucleoside triphosphate pyrophosphatase) [Source:ZFIN;Acc:ZDB-GENE-070705-218]
12. prelid1b ENSDARG00000044169 501 1.74 - 0.925 - - - 0.815 - - - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
13. SENP7 SENP7 1097 1.736 - - - - - 0.742 - - 0.994
14. asphd2 ENSDARG00000059629 1005 1.734 - - - - - 0.743 - - 0.991 aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
15. grsf1 ENSDARG00000053021 2752 1.722 - - - - - 0.738 - - 0.984 G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
16. ppig ENSDARG00000044431 3427 1.713 - - - - - - 0.735 - 0.978 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
17. pvrl3l pvrl3l 943 1.709 - - - - - 0.724 - - 0.985
18. arid1aa ENSDARG00000101710 3644 1.703 - 0.945 - - - 0.758 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
19. uhmk1 ENSDARG00000059575 1486 1.695 - - - - - 0.712 - - 0.983 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
20. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.694 - - - - - 0.703 - - 0.991 inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
21. ptpn23a ENSDARG00000070124 1206 1.693 - - - - - - 0.706 - 0.987 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
22. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.692 - - 0.723 - - - - - 0.969 ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
23. nme6 ENSDARG00000016138 207 1.69 - 0.870 - - - 0.820 - - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
24. KCTD14 ENSDARG00000110240 122 1.682 - 0.955 - - - 0.727 - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
25. exo1 ENSDARG00000056832, ENSDARG00000112534 186 1.681 - 0.898 0.783 - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
26. TNFRSF14_3 TNFRSF14_3 135 1.679 - 0.931 0.748 - - - - - -
27. slit1a ENSDARG00000044954 3810 1.676 - 0.736 - - - - - - 0.940 slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
28. cdkn2c ENSDARG00000057610 179 1.673 - 0.904 0.769 - - - - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
29. ENSDARG00000074705 ENSDARG00000074705 507 1.673 0.718 0.955 - - - - - - -
30. ca16b ENSDARG00000060123 389 1.671 - 0.921 - - - 0.750 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
31. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 1.671 - 0.770 - - - - - - 0.901 reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
32. NRBP2 NRBP2 127 1.667 - 0.897 - - - 0.770 - - -
33. rac3b ENSDARG00000020795 1523 1.65 - 0.897 - - - 0.753 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
34. dctn4 ENSDARG00000023988 860 1.644 - 0.807 - - - 0.837 - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
35. spata2 ENSDARG00000063250 501 1.629 - - - - - 0.846 - 0.783 - spermatogenesis associated 2 [Source:ZFIN;Acc:ZDB-GENE-070822-5]
36. tsta3 ENSDARG00000039666 1314 1.623 - 0.894 - - - 0.729 - - - tissue specific transplantation antigen P35B [Source:ZFIN;Acc:ZDB-GENE-040722-1]
37. ift57 ENSDARG00000021022 288 1.622 0.779 - - - - 0.843 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
38. casc3 ENSDARG00000029911 1174 1.621 - 0.860 - - - 0.761 - - - casc3, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-040308-2]
39. fgfr1op2 ENSDARG00000009657 904 1.615 - - - - - 0.893 - 0.722 - FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
40. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.601 - - - - - 0.786 - - 0.815 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
41. DTX4 ENSDARG00000076302 2642 1.599 - - - - - 0.810 - - 0.789 deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
42. ptbp3 ENSDARG00000043757 6760 1.586 - - - - - - 0.705 - 0.881 polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
43. daxx ENSDARG00000000729 734 1.579 - - - - - 0.822 0.757 - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
44. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 1.577 0.702 0.875 - - - - - - - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
45. MALSU1 MALSU1 1251 1.562 - - - - - 0.719 0.843 - -
46. slbp ENSDARG00000100558 3405 1.562 - 0.844 - - - - 0.718 - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
47. commd3 ENSDARG00000045402 1601 1.558 - - - - - 0.756 0.802 - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
48. BX649494.1 BX649494.1 195 1.554 - - 0.806 - - 0.748 - - -
49. sppl2 ENSDARG00000030448 1040 1.553 - 0.851 - - - 0.702 - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
50. ap2b1 ENSDARG00000035152 2912 1.553 - - - - - 0.818 0.735 - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
51. ruvbl1 ENSDARG00000002591 2381 1.545 - - - - - 0.820 - 0.725 - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
52. usp1 ENSDARG00000056414 1816 1.54 - 0.760 - - - 0.780 - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
53. EPT1 EPT1 1912 1.528 - 0.772 - - - - 0.756 - -
54. ARFGAP1 ENSDARG00000101616 2952 1.526 - 0.814 - - - 0.712 - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
55. CDA 491 1.517 - - - - - 0.816 0.701 - - cytidine deaminase
56. chrac1 ENSDARG00000042337 2590 1.51 - - - - - - 0.741 0.769 - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
57. tnika ENSDARG00000056218 728 1.5 - - 0.717 - - 0.783 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
58. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.493 - 0.735 - - - - 0.758 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
59. mettl2a ENSDARG00000008105, ENSDARG00000113100 1036 1.491 - - - - - 0.731 0.760 - - methyltransferase like 2A [Source:ZFIN;Acc:ZDB-GENE-050417-462]
60. si:ch211-266d19.4 ENSDARG00000012642 1251 1.474 0.767 - - - - 0.707 - - - si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
61. vps39 ENSDARG00000074471 684 1.468 - 0.743 - - - 0.725 - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
62. tp53bp2 tp53bp2 1969 1.467 - 0.717 - - - 0.750 - - -
63. txlna ENSDARG00000077037 2614 1.456 - 0.728 - - - - 0.728 - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
64. vps72 1164 1.454 - - - - - 0.745 - - 0.709 vacuolar protein sorting 72 homolog (S. cerevisiae)
65. RBM6 ENSDARG00000077060 3521 1.453 - - - - - 0.749 0.704 - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
66. RNF38 ENSDARG00000062055 3901 1.451 - 0.736 - - - 0.715 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
67. b4galt6 ENSDARG00000010301 2005 1.447 - - - - - 0.714 - 0.733 - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
68. rbm28 ENSDARG00000025332 2685 1.413 0.710 - - - - 0.703 - - - RNA binding motif protein 28 [Source:ZFIN;Acc:ZDB-GENE-040426-960]
69. tmem18 ENSDARG00000036704 1784 1.409 - - - - - - 0.702 - 0.707 transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
70. ARAP2 ARAP2 428 0.994 - - - - - - - - 0.994
71. OTOS ENSDARG00000108475 180 0.994 - - - - - - - - 0.994 otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
72. wdr66 ENSDARG00000059855 276 0.994 - - - - - - - - 0.994 WD repeat domain 66 [Source:ZFIN;Acc:ZDB-GENE-060526-328]
73. eefsec ENSDARG00000004696 791 0.994 - - - - - - - - 0.994 eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
74. SURF2 ENSDARG00000112476 592 0.994 - - - - - - - - 0.994 surfeit 2 [Source:ZFIN;Acc:ZDB-GENE-040801-86]
75. CABZ01073417.1 CABZ01073417.1 232 0.994 - - - - - - - - 0.994
76. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.994 - - - - - - - - 0.994 G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
77. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 0.994 - - - - - - - - 0.994 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
78. nr1d4b ENSDARG00000059370 243 0.994 - - - - - - - - 0.994 nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
79. pcloa ENSDARG00000063299 353 0.994 - - - - - - - - 0.994 piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
80. si:ch73-109d9.1 ENSDARG00000052019 248 0.994 - - - - - - - - 0.994 si:ch73-109d9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-256]
81. PPP1R21 ENSDARG00000103144 385 0.994 - - - - - - - - 0.994 protein phosphatase 1, regulatory subunit 21 [Source:ZFIN;Acc:ZDB-GENE-041114-8]
82. gsg1l ENSDARG00000037390 181 0.993 - - - - - - - - 0.993 gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
83. rhogd ENSDARG00000030608, ENSDARG00000112157 599 0.993 - - - - - - - - 0.993 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
84. plekhg5a ENSDARG00000025902 397 0.993 - - - - - - - - 0.993 pleckstrin homology domain containing, family G (with RhoGef domain) member 5a [Source:ZFIN;Acc:ZDB-GENE-060503-766]
85. syt4 ENSDARG00000036505 421 0.993 - - - - - - - - 0.993 synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
86. lace1a lace1a 561 0.993 - - - - - - - - 0.993
87. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.993 - - - - - - - - 0.993 kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
88. nol10 ENSDARG00000020077 984 0.993 - - - - - - - - 0.993 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
89. ascc2 ENSDARG00000013058 228 0.993 - - - - - - - - 0.993 activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
90. si:ch211-103e16.4 si:ch211-103e16.4 227 0.993 - - - - - - - - 0.993
91. etv2 ENSDARG00000053868 715 0.993 - - - - - - - - 0.993 ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
92. homer3 homer3 1974 0.993 - - - - - - - - 0.993
93. smad2 ENSDARG00000006389 646 0.993 - - - - - - - - 0.993 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
94. TRMT10A ENSDARG00000036678 621 0.992 - - - - - - - - 0.992 tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
95. s100a10a ENSDARG00000037425 237 0.992 - - - - - - - - 0.992 S100 calcium binding protein A10a [Source:ZFIN;Acc:ZDB-GENE-041010-35]
96. NGEF ENSDARG00000076179 445 0.992 - - - - - - - - 0.992 neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]
97. entpd2a.2 ENSDARG00000033953 389 0.992 - - - - - - - - 0.992 ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
98. zgc:112484 zgc:112484 780 0.992 - - - - - - - - 0.992
99. stxbp5b ENSDARG00000029234 760 0.992 - - - - - - - - 0.992 syntaxin binding protein 5b (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-090821-5]
100. CU695232.1 ENSDARG00000098286 1266 0.992 - - - - - - - - 0.992 zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]

There are 1817 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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