Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rabgef1l

Gene Name Gene ID Reads Annotation
rabgef1l ENSDARG00000015968 38 RAB guanine nucleotide exchange factor (GEF) 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-813]










Genes with expression patterns similar to rabgef1l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rabgef1l ENSDARG00000015968 38 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB guanine nucleotide exchange factor (GEF) 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-813]
2. BICD2_1 BICD2_1 18 1.947 0.958 - - - 0.989 - - - -
3. si:ch211-281g2.4 si:ch211-281g2.4 121 1.769 0.986 0.783 - - - - - - -
4. ftr29 ENSDARG00000075355 172 1.762 0.865 - - - - - 0.897 - - finTRIM family, member 29 [Source:ZFIN;Acc:ZDB-GENE-050417-159]
5. AHNAK2 AHNAK2 33 1.71 - 0.747 - - 0.963 - - - -
6. si:ch73-138e16.8 175 1.71 0.903 - - - - - 0.807 - - si:ch73-138e16.8
7. FP236789.2 FP236789.2 335 1.702 0.905 - - - - - 0.797 - -
8. si:dkey-27n6.9 51 1.692 0.865 - - - 0.827 - - - - si:dkey-27n6.9, transcript variant X4
9. HPS6 265 1.689 0.903 - - - - - 0.786 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
10. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.686 - 0.761 - - - - 0.925 - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
11. DAPK2 DAPK2 283 1.65 0.926 0.724 - - - - - - -
12. chfr ENSDARG00000075347 664 1.619 - 0.768 - - - - 0.851 - - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
13. slc6a11a ENSDARG00000074002 189 1.614 - 0.766 - - - - 0.848 - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
14. PEG3_22 PEG3_22 33 1.607 - 0.772 - - - - 0.835 - -
15. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.607 - 0.864 - - - - 0.743 - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
16. PEG3_40 PEG3_40 186 1.606 0.772 0.834 - - - - - - -
17. cox5aa ENSDARG00000088383 21 1.566 - 0.776 - - - 0.790 - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
18. pex3 ENSDARG00000013973 312 1.56 0.704 0.856 - - - - - - - peroxisomal biogenesis factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-979]
19. BX548000.3 BX548000.3 241 1.55 0.713 - - - - - 0.837 - -
20. nfe2l1a ENSDARG00000030616, ENSDARG00000116760 68 1.541 0.710 - - - - - 0.831 - - nuclear factor, erythroid 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-040630-5]
21. stk17a ENSDARG00000074715 528 1.52 0.812 0.708 - - - - - - - serine/threonine kinase 17a [Source:ZFIN;Acc:ZDB-GENE-030131-5556]
22. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1.515 - 0.776 - - - 0.739 - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
23. ptges ENSDARG00000020136, ENSDARG00000115727 747 1.509 0.734 - - - - - 0.775 - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
24. slc1a7a ENSDARG00000034940 149 1.506 - 0.792 - - - - 0.714 - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
25. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1.483 - - 0.744 - - 0.739 - - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
26. tmem129 ENSDARG00000075346 109 1.474 0.728 - - - - - 0.746 - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
27. itga1 ENSDARG00000074316, ENSDARG00000116602 610 1.462 - 0.734 - - - - 0.728 - - integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]
28. RNF122 RNF122 29 1 - - - - - 1.000 - - -
29. dcbld1 ENSDARG00000015907 36 1 - - - - - 1.000 - - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
30. ANKRD65 ANKRD65 20 1 - - - - - 1.000 - - -
31. ndufa4l2 153 1 - - - - - 1.000 - - - NDUFA4, mitochondrial complex associated like 2
32. CU928126.3 CU928126.3 18 0.996 - - - - 0.996 - - - -
33. PLA2G10 PLA2G10 9 0.994 - - - - 0.994 - - - -
34. grk1a ENSDARG00000058803 13 0.991 - - - - 0.991 - - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
35. CU596012.1 CU596012.1 24 0.99 - - - - 0.990 - - - -
36. CABZ01077218.1 ENSDARG00000089720 8 0.989 - - - - 0.989 - - - -
37. dapp1 ENSDARG00000039535 23 0.989 - - - - 0.989 - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
38. BX119910.6 BX119910.6 11 0.989 - - - - 0.989 - - - -
39. si:dkey-51d8.7 si:dkey-51d8.7 2 0.989 - - - - 0.989 - - - -
40. CU571066.1 ENSDARG00000117795 2 0.989 - - - - 0.989 - - - -
41. PDILT PDILT 6 0.989 - - - - 0.989 - - - -
42. FBXO15 ENSDARG00000016897 4 0.989 - - - - 0.989 - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
43. zmynd10 ENSDARG00000002406, ENSDARG00000110880, ENSDARG00000114303 10 0.989 - - - - 0.989 - - - - zinc finger, MYND-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1218]
44. si:ch211-1k7.1 si:ch211-1k7.1 2 0.989 - - - - 0.989 - - - -
45. BX088646.1 BX088646.1 34 0.989 - - - - 0.989 - - - -
46. lct ENSDARG00000060671 4 0.989 - - - - 0.989 - - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
47. si:ch211-57f7.7 ENSDARG00000093131 8 0.984 - - - - 0.984 - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
48. dhrs13l1 ENSDARG00000098746 102 0.984 - - - - 0.984 - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
49. SIGLEC15 SIGLEC15 10 0.984 - - - - 0.984 - - - -
50. si:dkeyp-13a3.9 si:dkeyp-13a3.9 362 0.983 0.983 - - - - - - - -
51. si:ch1073-221c23.2 si:ch1073-221c23.2 17 0.982 - - - - 0.982 - - - -
52. CT573248.1 ENSDARG00000074029 10 0.981 - - - - 0.981 - - - -
53. BX511189.1 BX511189.1 34 0.981 - - - - 0.981 - - - -
54. SNORA32 SNORA32 10 0.981 - - - - 0.981 - - - -
55. FAM177A1 ENSDARG00000079636 19 0.978 - - - - 0.978 - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
56. zgc:77112 ENSDARG00000015657 24 0.978 - - - - 0.978 - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
57. si:dkey-262g12.3 ENSDARG00000094612 41 0.977 0.977 - - - - - - - - si:dkey-262g12.3 [Source:ZFIN;Acc:ZDB-GENE-060503-255]
58. si:dkey-4i23.7 si:dkey-4i23.7 19 0.977 - - - - 0.977 - - - -
59. CT990569.2 CT990569.2 531 0.976 0.976 - - - - - - - -
60. MAGI3 MAGI3 114 0.973 0.973 - - - - - - - -
61. si:dkey-71b5.2 si:dkey-71b5.2 10 0.972 - - - - 0.972 - - - -
62. si:dkey-208n4.1 si:dkey-208n4.1 10 0.972 - - - - 0.972 - - - -
63. AL929007.2 AL929007.2 117 0.971 0.971 - - - - - - - -
64. ppp1r12c ENSDARG00000052423 183 0.97 0.970 - - - - - - - - protein phosphatase 1, regulatory subunit 12C [Source:ZFIN;Acc:ZDB-GENE-010724-11]
65. cxcr3.1 ENSDARG00000007358, ENSDARG00000078177, ENSDARG00000111607 9 0.968 - - - - 0.968 - - - - chemokine (C-X-C motif) receptor 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060130-38]
66. im:7136021 ENSDARG00000054128 79 0.966 0.966 - - - - - - - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
67. ppp1r37_1 ENSDARG00000078458 36 0.966 - 0.966 - - - - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
68. casp3b ENSDARG00000055045 54 0.962 0.962 - - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
69. CR936408.1 ENSDARG00000078938 15 0.96 - - - - 0.960 - - - - uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
70. zgc:162161 zgc:162161 115 0.959 - - - - - - 0.959 - -
71. nudt6 ENSDARG00000103523 64 0.959 - - - - 0.959 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
72. sv2 ENSDARG00000091833 22 0.958 0.958 - - - - - - - - synaptic vesicle glycoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-000607-80]
73. CU041398.1 CU041398.1 17 0.958 0.958 - - - - - - - -
74. cgna ENSDARG00000055607 11 0.958 0.958 - - - - - - - - cingulin a [Source:ZFIN;Acc:ZDB-GENE-100921-78]
75. bspry ENSDARG00000104875 63 0.958 0.958 - - - - - - - - B-box and SPRY domain containing [Source:ZFIN;Acc:ZDB-GENE-060526-219]
76. BX323448.1 ENSDARG00000116236 10 0.958 0.958 - - - - - - - -
77. si:ch211-199c19.4 si:ch211-199c19.4 27 0.958 0.958 - - - - - - - -
78. AGO3 AGO3 12 0.958 0.958 - - - - - - - -
79. si:ch211-165f21.6 si:ch211-165f21.6 5 0.958 0.958 - - - - - - - -
80. PKN1 PKN1 42 0.958 0.958 - - - - - - - -
81. si:ch211-145h19.2 7 0.958 0.958 - - - - - - - - si:ch211-145h19.2
82. xpnpep2 ENSDARG00000026017 16 0.958 0.958 - - - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
83. irf4b ENSDARG00000055374, ENSDARG00000115381 4 0.958 0.958 - - - - - - - - interferon regulatory factor 4b [Source:ZFIN;Acc:ZDB-GENE-041001-131]
84. cenpv ENSDARG00000092285 10 0.958 0.958 - - - - - - - - centromere protein V [Source:ZFIN;Acc:ZDB-GENE-060526-76]
85. gba2 ENSDARG00000061472 171 0.958 0.958 - - - - - - - - glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
86. gata4 ENSDARG00000098952 11 0.958 0.958 - - - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
87. abhd2b ENSDARG00000045804, ENSDARG00000115068 23 0.958 0.958 - - - - - - - - abhydrolase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061027-74]
88. SLC22A15 ENSDARG00000055445 111 0.958 0.958 - - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
89. CLCN2 CLCN2 8 0.958 0.958 - - - - - - - -
90. si:dkey-88e10.2 si:dkey-88e10.2 7 0.958 0.958 - - - - - - - -
91. si:ch211-92l17.1 ENSDARG00000094584 18 0.958 0.958 - - - - - - - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
92. si:ch211-89f22.1 si:ch211-89f22.1 11 0.958 0.958 - - - - - - - -
93. CU367845.1_1 CU367845.1_1 43 0.958 0.958 - - - - - - - -
94. large 9 0.958 0.958 - - - - - - - - like-glycosyltransferase, transcript variant X1
95. TRIM14_3 TRIM14_3 7 0.958 0.958 - - - - - - - -
96. zgc:114037_1 10 0.955 - - - - 0.955 - - - - zgc:114037
97. soul5l ENSDARG00000089879 20 0.953 0.953 - - - - - - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
98. AL954676.2 AL954676.2 50 0.952 - - - - 0.952 - - - -
99. vstm2l ENSDARG00000098289 19 0.951 - - - - 0.951 - - - - V-set and transmembrane domain containing 2 like [Source:ZFIN;Acc:ZDB-GENE-040426-1548]
100. doc2d ENSDARG00000079962 76 0.951 - - - - - - 0.951 - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]

There are 1056 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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