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Results for rabgef1

Gene Name Gene ID Reads Annotation
rabgef1 ENSDARG00000014430 1176 RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]










Genes with expression patterns similar to rabgef1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rabgef1 ENSDARG00000014430 1176 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
2. ednrab ENSDARG00000062262 565 2.513 - 0.777 - 0.829 0.907 - - - - endothelin receptor type Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2364]
3. plcd1b ENSDARG00000034080 4074 2.47 - 0.770 - - - 0.971 0.729 - - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
4. pgm2 ENSDARG00000018178 985 1.907 - - - 0.912 - 0.995 - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
5. amotl2a ENSDARG00000061923 4713 1.906 - - - - 0.935 0.971 - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
6. sh3yl1 ENSDARG00000074393 815 1.902 - - - - 0.905 0.997 - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
7. ftr67 ENSDARG00000098820 611 1.862 - - - 0.949 0.913 - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
8. ctsf ENSDARG00000063095 4564 1.851 - - - - 0.860 0.991 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
9. nt5c2b ENSDARG00000058231 3822 1.832 - - - - 0.850 0.982 - - - 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
10. atp2a3 ENSDARG00000060978 1408 1.831 - 0.845 - - - 0.986 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
11. IKZF2 ENSDARG00000069111 1366 1.828 - - - - 0.859 0.969 - - - IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
12. ptp4a2 ptp4a2 3196 1.826 - - - - - 0.992 0.834 - -
13. chrnd ENSDARG00000019342 2728 1.808 - - - - 0.820 0.988 - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
14. mapk3 ENSDARG00000070573 6842 1.806 - - - - 0.867 0.939 - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
15. skia ENSDARG00000042151 1850 1.802 - - - 0.903 0.899 - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
16. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.768 - - - 0.888 0.880 - - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
17. arf1l arf1l 9119 1.743 - - - - - 0.960 0.783 - -
18. rab1ba ENSDARG00000058044 5080 1.743 - - - - 0.756 0.987 - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
19. eva1a ENSDARG00000061405 896 1.742 - - - 0.747 - 0.995 - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
20. zmat5 ENSDARG00000035434 983 1.738 - 0.740 - - - 0.998 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
21. dnajb12b ENSDARG00000087473 3811 1.738 - - - - 0.754 0.984 - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
22. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 1.732 - 0.797 - - 0.935 - - - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
23. cyb5a ENSDARG00000098589 9430 1.724 - - - - - 0.958 0.766 - - cytochrome b5 type A (microsomal) [Source:ZFIN;Acc:ZDB-GENE-040426-2148]
24. usp25 ENSDARG00000012314 734 1.719 - - - 0.796 0.923 - - - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
25. asb2b ENSDARG00000102490 311 1.717 - 0.800 - - 0.917 - - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
26. itpkb ENSDARG00000010059 2352 1.716 - - - 0.722 - 0.994 - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
27. snx12 ENSDARG00000019060 9563 1.716 - - - - - 0.985 0.731 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
28. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.71 - - - - 0.931 - 0.779 - - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
29. padi2 ENSDARG00000044167 6765 1.706 - - - - - 0.917 0.789 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
30. parvaa ENSDARG00000043710 3495 1.693 - - - - 0.705 0.988 - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
31. pigt ENSDARG00000075842 210 1.693 - 0.742 - - 0.951 - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
32. dhdds ENSDARG00000039851 1135 1.69 0.762 - - - 0.928 - - - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
33. dct ENSDARG00000006008 2466 1.675 - - - - 0.910 0.765 - - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
34. AC024175.17 AC024175.17 59065 1.67 - - - - - 0.931 0.739 - -
35. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.669 - - - - 0.858 - 0.811 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
36. gstp1 ENSDARG00000104068 12698 1.667 - - - - 0.852 0.815 - - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
37. rhag ENSDARG00000019253 2974 1.659 - - - - 0.891 0.768 - - - Rh associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8229]
38. mis18a ENSDARG00000035333 555 1.659 - - - - 0.948 - 0.711 - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
39. SCYL2 ENSDARG00000032627 683 1.649 - 0.779 - 0.870 - - - - - SCY1 like pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:19286]
40. arl11 ENSDARG00000036637 707 1.644 - - - - 0.894 - 0.750 - - ADP-ribosylation factor-like 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3410]
41. ARHGEF5 2727 1.644 - - - - - 0.925 0.719 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
42. si:dkey-28b4.8 ENSDARG00000002840 1277 1.643 - 0.715 - - 0.928 - - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
43. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.639 - 0.790 - - 0.849 - - - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
44. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 1.638 - - - - 0.916 - 0.722 - - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
45. prelid1a ENSDARG00000098671 4745 1.637 - - - - 0.919 - 0.718 - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
46. zfand2a ENSDARG00000103511 829 1.635 - - - 0.715 0.920 - - - - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
47. mybbp1a ENSDARG00000078214 2458 1.634 - - - 0.759 0.875 - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
48. b3gnt2b ENSDARG00000091902 4125 1.613 - - - - 0.858 - 0.755 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
49. rasal2 ENSDARG00000036257 3223 1.611 - 0.755 - 0.856 - - - - - RAS protein activator like 2 [Source:ZFIN;Acc:ZDB-GENE-070912-180]
50. rprd1b ENSDARG00000038113 1105 1.607 - - - - 0.891 - 0.716 - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
51. C8H5orf51 C8H5orf51 1199 1.602 - - - - 0.897 - 0.705 - -
52. ZNF337_2 ZNF337_2 260 1.599 - 0.702 - 0.897 - - - - -
53. cmc1 ENSDARG00000103670 1197 1.597 - - - 0.897 - - 0.700 - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
54. mul1a ENSDARG00000021398 438 1.593 - 0.781 - 0.812 - - - - - mitochondrial E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-050102-5]
55. CENPF ENSDARG00000055133 436 1.591 - - - 0.889 - - 0.702 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
56. naa30 ENSDARG00000079686 814 1.579 - - - 0.838 - - 0.741 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
57. prkar1aa ENSDARG00000076128 6565 1.571 - - - - 0.804 - 0.767 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
58. dcun1d1 ENSDARG00000099642 2043 1.571 - 0.739 - 0.832 - - - - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
59. melk ENSDARG00000030759 1150 1.569 - 0.707 - - 0.862 - - - - maternal embryonic leucine zipper kinase [Source:ZFIN;Acc:ZDB-GENE-990603-5]
60. PATZ1 ENSDARG00000076584 1116 1.559 - 0.757 - 0.802 - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
61. ATOX1 ENSDARG00000087693 4016 1.556 - - - - 0.796 - 0.760 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
62. dse ENSDARG00000017988 2169 1.552 - - - - - - 0.833 - 0.719 dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
63. BX957362.1 ENSDARG00000105682 1941 1.551 - - - 0.737 0.814 - - - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
64. slc30a1a ENSDARG00000005463 1011 1.548 - - - 0.758 - - - - 0.790 solute carrier family 30 (zinc transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1840]
65. gsnb ENSDARG00000045262 4382 1.541 - - - - 0.777 - 0.764 - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
66. ovol1 1037 1.525 - - - 0.753 - - 0.772 - - ovo-like zinc finger 1, transcript variant X1
67. fgfr1op2 ENSDARG00000009657 904 1.508 - 0.790 - - - - - - 0.718 FGFR1 oncogene partner 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7451]
68. b4galt6 ENSDARG00000010301 2005 1.508 - - - 0.711 - - 0.797 - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
69. scaf4a ENSDARG00000077093 2408 1.506 - - - - 0.786 - 0.720 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
70. btbd10b ENSDARG00000020252 7251 1.506 - - - 0.744 - - 0.762 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
71. SGPP1 ENSDARG00000060534 1802 1.486 - 0.743 - 0.743 - - - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
72. myrf ENSDARG00000078676 614 1.475 - 0.727 - - - - 0.748 - - myelin regulatory factor [Source:ZFIN;Acc:ZDB-GENE-080204-57]
73. ap1s3b ENSDARG00000027966 1064 1.468 - - - - - - 0.756 - 0.712 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
74. RAC1 RAC1 2008 1.465 - 0.750 - 0.715 - - - - -
75. aktip ENSDARG00000026862, ENSDARG00000115058 2775 1.458 - - - - - - 0.725 0.733 - akt interacting protein [Source:ZFIN;Acc:ZDB-GENE-030909-5]
76. bop1 ENSDARG00000063627 643 1.457 - 0.715 - 0.742 - - - - - block of proliferation 1 [Source:ZFIN;Acc:ZDB-GENE-030219-109]
77. CR762484.3 CR762484.3 395 1.445 - 0.711 - 0.734 - - - - -
78. gsr ENSDARG00000019236, ENSDARG00000114106 1149 1.414 - - - - - - 0.707 - 0.707 glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
79. BRCC3 ENSDARG00000098242 1123 0.997 - - - - - 0.997 - - - BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
80. CASKIN2_1 CASKIN2_1 2299 0.997 - - - - - 0.997 - - -
81. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.997 - - - - - 0.997 - - -
82. pld2 ENSDARG00000034262 952 0.997 - - - - - 0.997 - - - phospholipase D2 [Source:ZFIN;Acc:ZDB-GENE-060216-4]
83. twf1a ENSDARG00000115712 3465 0.997 - - - - - 0.997 - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
84. SMARCA1 ENSDARG00000012776 673 0.997 - - - - - 0.997 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
85. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.997 - - - - - 0.997 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
86. rc3h1 rc3h1 1087 0.997 - - - - - 0.997 - - -
87. si:dkey-3d4.3 ENSDARG00000074079 365 0.997 - - - - - 0.997 - - - si:dkey-3d4.3 [Source:ZFIN;Acc:ZDB-GENE-070912-527]
88. ppp2r2a ppp2r2a 5785 0.997 - - - - - 0.997 - - -
89. tdrd3 ENSDARG00000025421 633 0.996 - - - - - 0.996 - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
90. mcts1 ENSDARG00000025972 4662 0.996 - - - - - 0.996 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
91. lap3 ENSDARG00000061981 1188 0.996 - - - - - 0.996 - - - leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
92. amt ENSDARG00000010862, ENSDARG00000113280 367 0.996 - - - - - 0.996 - - - aminomethyltransferase [Source:ZFIN;Acc:ZDB-GENE-041010-114]
93. FAR2 FAR2 1459 0.996 - - - - - 0.996 - - -
94. nog2 ENSDARG00000043066 233 0.996 - - - - - 0.996 - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
95. mpi ENSDARG00000030786 3052 0.996 - - - - - 0.996 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
96. ndufv2 ENSDARG00000013044 3758 0.996 - - - - - 0.996 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
97. si:ch211-163l21.8 ENSDARG00000042899 724 0.995 - - - - - 0.995 - - - si:ch211-163l21.8 [Source:ZFIN;Acc:ZDB-GENE-041008-93]
98. yes1 ENSDARG00000005941 3577 0.995 - - - - - 0.995 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-050126-1]
99. pank2 ENSDARG00000003311 881 0.995 - - - - - 0.995 - - - pantothenate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1952]
100. C9H2orf76 C9H2orf76 559 0.995 - - - - - 0.995 - - -

There are 1409 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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