Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rabep2

Gene Name Gene ID Reads Annotation
rabep2 ENSDARG00000061213 465 rabaptin, RAB GTPase binding effector protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-572]










Genes with expression patterns similar to rabep2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rabep2 ENSDARG00000061213 465 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 rabaptin, RAB GTPase binding effector protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-572]
2. tab3 ENSDARG00000062063 525 3.162 - 0.719 - 0.723 - 0.891 0.829 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-408]
3. si:dkey-169i5.4 ENSDARG00000077862 511 1.696 - - - 0.808 - 0.888 - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
4. nod2 ENSDARG00000010756 294 1.691 - - - - - 0.920 0.771 - - nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
5. si:dkey-92i15.4 ENSDARG00000078387 428 1.687 - - - 0.731 - 0.956 - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
6. gale ENSDARG00000002401 5489 1.682 - - - - - 0.876 - 0.806 - UDP-galactose-4-epimerase [Source:ZFIN;Acc:ZDB-GENE-060421-6479]
7. plaa ENSDARG00000042728 1284 1.68 - - - - - 0.924 0.756 - - phospholipase A2-activating protein [Source:ZFIN;Acc:ZDB-GENE-030826-13]
8. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.678 - - - - - 0.934 0.744 - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
9. ABI3_1 ABI3_1 511 1.677 - - - 0.763 - 0.914 - - -
10. ARSJ ENSDARG00000077590 684 1.67 - - - 0.738 - 0.932 - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
11. adhfe1 ENSDARG00000053518 499 1.658 - - - - - 0.904 - 0.754 - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
12. mrpl48 ENSDARG00000035167 1008 1.635 - - - 0.771 - 0.864 - - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
13. sbds ENSDARG00000027803 846 1.624 - - - - - 0.792 0.832 - - SBDS, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-040426-1116]
14. tom1 ENSDARG00000104581 1457 1.598 - 0.706 - - - 0.892 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
15. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.592 - - - - - 0.861 0.731 - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
16. rgl3a ENSDARG00000071213 350 1.577 - - - - - 0.843 0.734 - - ral guanine nucleotide dissociation stimulator-like 3a [Source:ZFIN;Acc:ZDB-GENE-101130-1]
17. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.577 - - - - - 0.819 0.758 - - pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
18. kif18a ENSDARG00000008022 546 1.56 - 0.790 - - - - 0.770 - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
19. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.559 - - - - - 0.794 - 0.765 - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
20. pno1 ENSDARG00000008502 4547 1.542 - - - 0.764 - - 0.778 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
21. gmppab ENSDARG00000023498 1272 1.52 - - - - - 0.799 - 0.721 - GDP-mannose pyrophosphorylase Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1550]
22. NFRKB ENSDARG00000091512 646 1.506 - 0.802 - 0.704 - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
23. fam206a ENSDARG00000070407 537 1.473 - - - 0.718 - - 0.755 - - family with sequence similarity 206, member A [Source:ZFIN;Acc:ZDB-GENE-060503-602]
24. si:dkey-117n7.5 ENSDARG00000089640 452 0.991 - - - - - 0.991 - - - si:dkey-117n7.5 [Source:ZFIN;Acc:ZDB-GENE-060503-331]
25. mif ENSDARG00000071336 1328 0.986 - - - - - 0.986 - - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
26. znf750 ENSDARG00000102267 327 0.986 - - - - - 0.986 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
27. FP236334.1 FP236334.1 345 0.986 - - - - - 0.986 - - -
28. slco2a1 ENSDARG00000061896 58 0.986 - - - - - 0.986 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
29. AC024175.9 AC024175.9 56 0.985 - - - - - 0.985 - - -
30. si:zfos-364h11.1 99 0.983 - - - - - 0.983 - - - si:zfos-364h11.1, transcript variant X4
31. inhbab ENSDARG00000024759 29 0.983 - - - - - 0.983 - - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
32. tmem53 ENSDARG00000038789 411 0.982 - - - - - 0.982 - - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
33. rdh8b ENSDARG00000105060 183 0.982 - - - - - 0.982 - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
34. ube2j1 ENSDARG00000033489 497 0.981 - - - - - 0.981 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
35. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.981 - - - - - 0.981 - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
36. TESK1_1 TESK1_1 276 0.98 - - - - - 0.980 - - -
37. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.98 - - - - - 0.980 - - - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
38. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 0.98 - - - - - 0.980 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
39. RECQL4 ENSDARG00000077516 462 0.979 - - - - - 0.979 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
40. SLC22A15 ENSDARG00000055445 111 0.979 - - - - - 0.979 - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
41. CCDC64B CCDC64B 337 0.979 - - - - - 0.979 - - -
42. CU929417.2 CU929417.2 94 0.979 - - - - - 0.979 - - -
43. egr3 ENSDARG00000089156 71 0.979 - - - - - 0.979 - - - early growth response 3 [Source:ZFIN;Acc:ZDB-GENE-040718-394]
44. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 0.979 - - - - - 0.979 - - - abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
45. ngly1 ENSDARG00000003205 733 0.978 - - - - - 0.978 - - - N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
46. zgc:110286 92 0.978 - - - - - 0.978 - - - zgc:110286
47. FYCO1 FYCO1 194 0.978 - - - - - 0.978 - - -
48. si:dkey-57h18.2 33 0.978 - - - - - 0.978 - - - si:dkey-57h18.2, transcript variant X1
49. pcgf5b ENSDARG00000052388 163 0.978 - - - - - 0.978 - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
50. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.978 - - - - - 0.978 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
51. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 0.978 - - - - - 0.978 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
52. si:ch211-105d18.6 si:ch211-105d18.6 59 0.978 - - - - - 0.978 - - -
53. CR759791.3 CR759791.3 134 0.978 - - - - - 0.978 - - -
54. si:dkey-115f9.2 si:dkey-115f9.2 18 0.978 - - - - - 0.978 - - -
55. ccdc173 ENSDARG00000077928 260 0.978 - - - - - 0.978 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
56. ankrd39 ENSDARG00000041350 73 0.978 - - - - - 0.978 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
57. CIR1 ENSDARG00000099733 66 0.978 - - - - - 0.978 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
58. tph2 ENSDARG00000057239, ENSDARG00000109777 55 0.978 - - - - - 0.978 - - - tryptophan hydroxylase 2 (tryptophan 5-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-040624-4]
59. CR759816.1 ENSDARG00000098977 27 0.978 - - - - - 0.978 - - -
60. slc6a19b ENSDARG00000056719 140 0.978 - - - - - 0.978 - - - solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
61. bace2 ENSDARG00000044781 17 0.978 - - - - - 0.978 - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
62. ccnt2a ENSDARG00000036685 168 0.978 - - - - - 0.978 - - - cyclin T2a [Source:ZFIN;Acc:ZDB-GENE-030131-5779]
63. rprd2a ENSDARG00000058089 743 0.977 - - - - - 0.977 - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
64. CABZ01072083.1 CABZ01072083.1 56 0.977 - - - - - 0.977 - - -
65. crybb3 ENSDARG00000041301 48 0.977 - - - - - 0.977 - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
66. TDRD15 TDRD15 46 0.977 - - - - - 0.977 - - -
67. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.977 - - - - - 0.977 - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
68. dennd1b ENSDARG00000101868 328 0.976 - - - - - 0.976 - - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
69. ZC3H11A ENSDARG00000009754 281 0.976 - - - - - 0.976 - - - zinc finger CCCH-type containing 11A [Source:ZFIN;Acc:ZDB-GENE-030131-3272]
70. slc12a9 ENSDARG00000060366 293 0.976 - - - - - 0.976 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
71. si:dkey-240e12.6 ENSDARG00000110137 674 0.976 - - - - - 0.976 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
72. CU929328.1 ENSDARG00000105332 31 0.976 - - - - - 0.976 - - -
73. rhoab ENSDARG00000094673 26 0.975 - - - - - 0.975 - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
74. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.975 - - - - - 0.975 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
75. CU302436.3 CU302436.3 174 0.975 - - - - - 0.975 - - -
76. PCSK6 ENSDARG00000104574 710 0.974 - - - - - 0.974 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
77. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.974 - - - - - 0.974 - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
78. traf2b ENSDARG00000101036 429 0.974 - - - - - 0.974 - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
79. gdap1l1 ENSDARG00000028628 233 0.974 - - - - - 0.974 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
80. dscc1 ENSDARG00000019907 720 0.974 - - - - - 0.974 - - - DNA replication and sister chromatid cohesion 1 [Source:ZFIN;Acc:ZDB-GENE-040912-35]
81. stra13 598 0.974 - - - - - 0.974 - - - stimulated by retinoic acid 13 homolog (mouse)
82. dre-mir-429b ENSDARG00000082968 212 0.974 - - - - - 0.974 - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
83. myh14 ENSDARG00000073732 502 0.973 - - - - - 0.973 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
84. col17a1b ENSDARG00000079011 143 0.973 - - - - - 0.973 - - - collagen, type XVII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-7145]
85. sez6a ENSDARG00000100876 35 0.973 - - - - - 0.973 - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
86. kmt2e ENSDARG00000007523 1851 0.973 - - - - - 0.973 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
87. sc:d0139 sc:d0139 233 0.973 - - - - - 0.973 - - -
88. si:ch211-207c6.14 si:ch211-207c6.14 19 0.972 - - - - - 0.972 - - -
89. RBMS1 RBMS1 258 0.972 - - - - - 0.972 - - -
90. samd11 ENSDARG00000077852 631 0.972 - - - - - 0.972 - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
91. si:dkeyp-110g5.4 ENSDARG00000092482 249 0.972 - - - - - 0.972 - - - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
92. mesdc2 776 0.972 - - - - - 0.972 - - - mesoderm development candidate 2, transcript variant X2
93. sowahcb ENSDARG00000059582 178 0.972 - - - - - 0.972 - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
94. nphp3 ENSDARG00000078261 110 0.971 - - - - - 0.971 - - - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
95. GDPD2 ENSDARG00000073870 229 0.971 - - - - - 0.971 - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
96. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.971 - - - - - 0.971 - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
97. si:ch211-86h15.1 ENSDARG00000074098 354 0.97 - - - - - 0.970 - - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
98. sema6d ENSDARG00000002748 133 0.97 - - - - - 0.970 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
99. GCNT7 ENSDARG00000040608 91 0.969 - - - - - 0.969 - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
100. fosb ENSDARG00000055751 170 0.969 - - - - - 0.969 - - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]

There are 935 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA