Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab7

Gene Name Gene ID Reads Annotation
rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]










Genes with expression patterns similar to rab7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
2. hoxb3a ENSDARG00000029263 5493 1.939 - - - - - 0.943 0.996 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
3. meis1 meis1 6937 1.9 - - - - - 0.905 0.995 - -
4. eif3s6ip ENSDARG00000101082 18515 1.884 - - - - - 0.900 0.984 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
5. arpc3 ENSDARG00000057882 10113 1.884 - - - - - 0.895 0.989 - - actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
6. dynll1 ENSDARG00000058454 33932 1.866 - - - - - 0.913 0.953 - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
7. CU929378.1 CU929378.1 514 1.83 - 0.865 - - - 0.965 - - -
8. fubp1 ENSDARG00000029248 15259 1.814 - - - - - 0.818 0.996 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
9. ndufs7 ENSDARG00000074552, ENSDARG00000111455 10753 1.772 - - - - - 0.802 0.970 - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:ZFIN;Acc:ZDB-GENE-041111-261]
10. KRT78 KRT78 10751 1.752 - - - 0.777 - 0.975 - - -
11. ssu72 ENSDARG00000031216 2350 1.738 - 0.763 - - - 0.975 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
12. SH3BGRL ENSDARG00000058302 4525 1.718 - 0.721 - - - - 0.997 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
13. klf5a 1072 1.676 - - - - - 0.970 - 0.706 - Kruppel-like factor 5a
14. GPR112 GPR112 515 1.639 0.837 0.802 - - - - - - -
15. CABZ01070045.1 CABZ01070045.1 1322 1.464 - 0.759 - - - - - 0.705 -
16. cul1b ENSDARG00000007691 719 1.438 - - - 0.723 - - - 0.715 - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
17. chkb ENSDARG00000063167 440 1.42 - - - 0.713 - - - 0.707 - choline kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
18. degs1 ENSDARG00000007347 2481 0.999 - - - - - - 0.999 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
19. cd276 ENSDARG00000003061 2798 0.998 - - - - - - 0.998 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
20. dkk2 ENSDARG00000076420 553 0.998 - - - - - - 0.998 - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
21. irx3a ENSDARG00000101076 3106 0.998 - - - - - - 0.998 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
22. echdc2 ENSDARG00000016607 719 0.998 - - - - - - 0.998 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
23. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 0.998 - - - - - - 0.998 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
24. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 0.998 - - - - - - 0.998 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
25. cux2b ENSDARG00000086345 519 0.998 - - - - - - 0.998 - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
26. arf6b ENSDARG00000052928 4585 0.998 - - - - - - 0.998 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
27. fbl ENSDARG00000053912 5891 0.998 - - - - - - 0.998 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
28. ywhaqa ENSDARG00000042539 7034 0.998 - - - - - - 0.998 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
29. vipr2 ENSDARG00000012353, ENSDARG00000111580, ENSDARG00000115849 485 0.998 - - - - - - 0.998 - - vasoactive intestinal peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-010406-4]
30. ZNF462 ENSDARG00000112909 1132 0.998 - - - - - - 0.998 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
31. dnajc8 ENSDARG00000059373 1858 0.998 - - - - - - 0.998 - - DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-66]
32. ARHGAP35 2409 0.998 - - - - - - 0.998 - - Rho GTPase activating protein 35b, transcript variant X2
33. med6 ENSDARG00000034734 2711 0.998 - - - - - - 0.998 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
34. rbms1a ENSDARG00000074023 2742 0.998 - - - - - - 0.998 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
35. kif5aa ENSDARG00000098936 2428 0.998 - - - - - - 0.998 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
36. USP31 ENSDARG00000074017 628 0.998 - - - - - - 0.998 - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
37. ctdsp1 ENSDARG00000040674 2828 0.998 - - - - - - 0.998 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
38. adssl ENSDARG00000012399 2271 0.998 - - - - - - 0.998 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
39. CABZ01075242.1_1 ENSDARG00000114227 1012 0.998 - - - - - - 0.998 - -
40. SLC29A4 ENSDARG00000059690 470 0.998 - - - - - - 0.998 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
41. pigo ENSDARG00000011743 928 0.998 - - - - - - 0.998 - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
42. inpp5e ENSDARG00000103926 567 0.998 - - - - - - 0.998 - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
43. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 0.998 - - - - - - 0.998 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
44. lgi2a ENSDARG00000111069 965 0.998 - - - - - - 0.998 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
45. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.998 - - - - - - 0.998 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
46. CR388132.2 ENSDARG00000104041 640 0.998 - - - - - - 0.998 - -
47. arrdc3a ENSDARG00000052690 2280 0.998 - - - - - - 0.998 - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
48. galnt11 ENSDARG00000063636 1188 0.998 - - - - - - 0.998 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
49. TNRC18 ENSDARG00000077052 1095 0.998 - - - - - - 0.998 - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
50. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.998 - - - - - - 0.998 - -
51. zbtb18 ENSDARG00000028228 3653 0.998 - - - - - - 0.998 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
52. C20H2orf44 C20H2orf44 486 0.998 - - - - - - 0.998 - -
53. vamp2 ENSDARG00000056877 2158 0.997 - - - - - - 0.997 - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
54. prkacba ENSDARG00000001782 1340 0.997 - - - - - - 0.997 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
55. mapk6 ENSDARG00000032103 6422 0.997 - - - - - - 0.997 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
56. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.997 - - - - - - 0.997 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
57. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.997 - - - - - - 0.997 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
58. mapre1b ENSDARG00000002659 9119 0.997 - - - - - - 0.997 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
59. mtmr14 ENSDARG00000059642 1405 0.997 - - - - - - 0.997 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
60. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.997 - - - - - - 0.997 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
61. GPANK1 ENSDARG00000053995 1535 0.997 - - - - - - 0.997 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
62. prkag1 ENSDARG00000003818 2800 0.997 - - - - - - 0.997 - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
63. TUBB8P7 TUBB8P7 1353 0.997 - - - - - - 0.997 - -
64. h1fx ENSDARG00000054058 4075 0.997 - - - - - - 0.997 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
65. TNRC6C_1 TNRC6C_1 6574 0.997 - - - - - - 0.997 - -
66. igfbp1a ENSDARG00000099351 1717 0.997 - - - - - - 0.997 - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
67. AP2A1 ENSDARG00000054320 5591 0.997 - - - - - - 0.997 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
68. CU457815.1 ENSDARG00000115823 1005 0.997 - - - - - - 0.997 - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
69. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 0.997 - - - - - - 0.997 - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
70. CAMK2G CAMK2G 3537 0.997 - - - - - - 0.997 - -
71. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.997 - - - - - - 0.997 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
72. zranb2 ENSDARG00000044332 6723 0.996 - - - - - - 0.996 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
73. pfkma ENSDARG00000014179 1293 0.996 - - - - - - 0.996 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
74. snrnp27 ENSDARG00000035625 9080 0.996 - - - - - - 0.996 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
75. elmo1 ENSDARG00000098753 6966 0.996 - - - - - - 0.996 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
76. timm13 ENSDARG00000058297 4447 0.996 - - - - - - 0.996 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
77. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 0.996 - - - - - - 0.996 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
78. zgc:110339 ENSDARG00000046030 8180 0.996 - - - - - - 0.996 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
79. gys1 ENSDARG00000016875 2037 0.995 - - - - - - 0.995 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
80. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 0.995 - - - - - - 0.995 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
81. grpel2 ENSDARG00000069421 5673 0.995 - - - - - - 0.995 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
82. fundc2 ENSDARG00000103740 3856 0.994 - - - - - - 0.994 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
83. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 0.994 - - - - - - 0.994 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
84. ppa1b ENSDARG00000030441 9027 0.994 - - - - - - 0.994 - - pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
85. tob1b ENSDARG00000021372 7048 0.994 - - - - - - 0.994 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
86. ctnnb1 ENSDARG00000014571 12004 0.993 - - - - - - 0.993 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
87. si:ch73-110p20.1 5932 0.993 - - - - - - 0.993 - - si:ch73-110p20.1
88. si:rp71-45k5.4 ENSDARG00000035679 10411 0.992 - - - - - - 0.992 - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
89. sept9a ENSDARG00000020235 6881 0.991 - - - - - - 0.991 - - septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
90. fuca1 fuca1 6176 0.991 - - - - - - 0.991 - -
91. vamp1 ENSDARG00000031283 3094 0.99 - - - - - - 0.990 - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
92. ip6k2 ip6k2 3926 0.99 - - - - - 0.990 - - -
93. sub1a ENSDARG00000053446 13383 0.988 - - - - - - 0.988 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
94. edf1 ENSDARG00000009950 10518 0.988 - - - - - - 0.988 - - endothelial differentiation-related factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1710]
95. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 0.987 - - - - - - 0.987 - - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
96. apobec2a ENSDARG00000018881 4790 0.987 - - - - - - 0.987 - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
97. mrpl43 ENSDARG00000076334 4045 0.987 - - - - - - 0.987 - - mitochondrial ribosomal protein L43 [Source:ZFIN;Acc:ZDB-GENE-040718-125]
98. cct5 ENSDARG00000045399 11572 0.987 - - - - - - 0.987 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
99. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 0.986 - - - - - - 0.986 - - chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
100. shmt1 ENSDARG00000052816 5463 0.986 - - - - - - 0.986 - - serine hydroxymethyltransferase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-040426-1558]

There are 626 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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