Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab6bb

Gene Name Gene ID Reads Annotation
rab6bb ENSDARG00000031343 1381 RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]










Genes with expression patterns similar to rab6bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab6bb ENSDARG00000031343 1381 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
2. FP102801.1_1 FP102801.1_1 238 3.119 - 0.804 - - - 0.798 0.721 0.796 -
3. TMEM151A ENSDARG00000077986 78 2.529 0.844 0.895 - - - - 0.790 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
4. si:ch211-278j3.3 ENSDARG00000020284 478 2.498 - 0.877 - - - 0.813 0.808 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
5. ROBO3_1 ROBO3_1 468 2.47 - - - - - 0.888 0.802 0.780 -
6. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.464 - 0.826 - - - 0.774 0.864 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
7. INA INA 950 2.436 - 0.869 - - - 0.716 0.851 - -
8. fmnl2b ENSDARG00000075041 1744 2.424 0.913 - - - - 0.763 0.748 - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
9. gabra5 ENSDARG00000070730 156 2.423 - 0.865 - - - 0.777 0.781 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
10. smarcd1 ENSDARG00000019004 6028 2.419 0.932 - - - - 0.754 0.733 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
11. ppp3ca ENSDARG00000004988 615 2.406 - 0.755 - - - 0.899 0.752 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
12. rab3ab ENSDARG00000043835 1267 2.388 - 0.745 - - - 0.829 0.814 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
13. st8sia5 ENSDARG00000036584 529 2.379 - 0.753 - - - 0.879 0.747 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
14. LANCL2 ENSDARG00000045465 1221 2.361 - 0.817 - - - 0.817 0.727 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
15. skilb ENSDARG00000022904 300 2.359 - - - 0.875 - 0.756 - 0.728 - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
16. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.354 - - - 0.793 - 0.716 0.845 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
17. CR384099.1 ENSDARG00000089193 193 2.334 - 0.824 - - - 0.791 0.719 - -
18. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.31 - 0.723 - - - 0.797 0.790 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
19. rgs20 ENSDARG00000038859 331 2.31 - - - - - 0.813 0.738 0.759 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
20. smad3b ENSDARG00000010207 951 2.289 - - - 0.814 - 0.762 0.713 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
21. adam11 ENSDARG00000079204 298 2.284 - 0.827 - - - 0.712 0.745 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
22. scn8aa ENSDARG00000005775 792 2.282 - - - 0.769 - 0.730 0.783 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
23. smarce1 ENSDARG00000016871 9628 2.268 0.813 - - - - 0.742 0.713 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
24. gtpbp10 ENSDARG00000040300 533 2.25 0.745 - - 0.796 - 0.709 - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
25. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 2.198 0.753 - - - - - 0.714 0.731 - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
26. si:ch211-194k22.8 ENSDARG00000096711 1318 1.821 - 0.904 - - - 0.917 - - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
27. C19H7orf41 C19H7orf41 2243 1.776 - - - - - 0.899 0.877 - -
28. nkx1.2lb ENSDARG00000099427 220 1.765 - - - - - 0.899 0.866 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
29. stmn2a ENSDARG00000033234 2272 1.752 - - - - - 0.881 0.871 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
30. C7H4orf48 C7H4orf48 1455 1.75 - 0.858 - - - 0.892 - - -
31. slc17a9b ENSDARG00000011049 231 1.741 - 0.874 - 0.867 - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
32. pnoca ENSDARG00000025024 467 1.734 - - - - - 0.874 0.860 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
33. tes ENSDARG00000051857 2020 1.733 0.892 - - - - 0.841 - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
34. sft2d3 ENSDARG00000070284 351 1.728 0.835 0.893 - - - - - - - SFT2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070907-1]
35. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.728 0.863 - - - - 0.865 - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
36. TMTC2 TMTC2 478 1.727 0.811 0.916 - - - - - - -
37. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.726 - - - - - 0.885 0.841 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
38. nadl1.2 695 1.725 - 0.870 - - - 0.855 - - - neural adhesion molecule L1.2, transcript variant X1
39. lingo1a ENSDARG00000034165 179 1.723 - - - - - 0.886 0.837 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
40. CU929175.1 CU929175.1 200 1.719 - 0.818 - 0.901 - - - - -
41. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.711 - - - - - 0.832 0.879 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
42. dopey1 438 1.708 - - - 0.832 - 0.876 - - - dopey family member 1, transcript variant X4
43. fam49bb ENSDARG00000045417 513 1.705 - 0.852 - 0.853 - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
44. atcaya ENSDARG00000071678 344 1.705 - - - - - 0.888 0.817 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
45. otpa ENSDARG00000014201 2290 1.699 - - - - - 0.871 0.828 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
46. SLC5A6 SLC5A6 179 1.698 - 0.825 - 0.873 - - - - -
47. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.696 0.916 - - - - 0.780 - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
48. LRCH1 ENSDARG00000078778 407 1.696 - 0.902 - 0.794 - - - - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
49. AL840631.3 AL840631.3 82 1.696 - 0.847 - 0.849 - - - - -
50. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.696 - - - - - 0.825 0.871 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
51. nexmifb ENSDARG00000029296 416 1.695 - - - - - 0.892 0.803 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
52. CT990561.1 ENSDARG00000058284 566 1.695 - 0.855 - - - 0.840 - - - EPH receptor A5 [Source:NCBI gene;Acc:797595]
53. si:dkey-58f10.12 ENSDARG00000092680 258 1.693 0.828 0.865 - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
54. mirlet7a-1 105 1.692 - 0.888 - - - 0.804 - - - microRNA let7a-1
55. hmox2b ENSDARG00000078452, ENSDARG00000117010 884 1.691 - - - - - 0.929 - 0.762 - heme oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-091118-52]
56. SV2B SV2B 208 1.691 - - - - - 0.835 0.856 - -
57. BX957337.1 BX957337.1 1685 1.689 - - - - - 0.878 0.811 - -
58. sh3gl2 sh3gl2 1305 1.689 - - - - - 0.801 0.888 - -
59. TUSC5 TUSC5 1436 1.689 - - - - - 0.852 0.837 - -
60. si:ch73-96b22.1 si:ch73-96b22.1 393 1.687 - 0.876 - - - - - 0.811 -
61. notch1b ENSDARG00000052094 7874 1.687 - - - - - 0.900 0.787 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
62. dcp1a ENSDARG00000100136 714 1.686 - 0.878 - - - 0.808 - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
63. sncgb ENSDARG00000109715 1014 1.685 - - - - - 0.835 0.850 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
64. SNORD18_1 SNORD18_1 5 1.684 - 0.865 - - - - 0.819 - -
65. stxbp1a ENSDARG00000001994 5154 1.683 - - - - - 0.866 0.817 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
66. nxph1 ENSDARG00000033447 182 1.682 - - - - - 0.875 0.807 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
67. atp6ap1a ENSDARG00000041417 898 1.679 - 0.796 - - - 0.883 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
68. lhfpl4a ENSDARG00000111810 206 1.679 - - - 0.866 - - 0.813 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
69. adarb1a ENSDARG00000041609 476 1.675 - - - - - 0.884 0.791 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
70. TTYH1 ENSDARG00000076804 399 1.674 - - - 0.800 - 0.874 - - - tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
71. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.671 - - - - - 0.886 0.785 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
72. lhx5 ENSDARG00000057936 785 1.67 - - - - - 0.843 0.827 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
73. sez6l2 ENSDARG00000076052 360 1.67 - - - - - 0.868 0.802 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
74. srxn1 ENSDARG00000079160 265 1.67 - 0.849 - 0.821 - - - - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
75. thsd7ba ENSDARG00000095022 231 1.67 - - - - - 0.861 0.809 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
76. si:ch211-133l11.10 ENSDARG00000005626 381 1.67 - - - - - 0.814 0.856 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
77. mir34 176 1.668 - - - - - 0.834 0.834 - - microRNA 34
78. RPH3A RPH3A 309 1.668 - - - - - 0.832 0.836 - -
79. MAP1A MAP1A 847 1.667 - - - - - 0.838 0.829 - -
80. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.665 - - - - - 0.855 0.810 - -
81. SNORD27 SNORD27 181 1.665 - 0.840 - 0.825 - - - - -
82. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.664 - - - - - 0.804 0.860 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
83. bcr ENSDARG00000079286 578 1.664 - - - 0.799 - 0.865 - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
84. znf236 ENSDARG00000095890 410 1.664 - 0.857 - 0.807 - - - - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
85. asnsd1 830 1.659 - 0.798 - - - 0.861 - - - asparagine synthetase domain containing 1, transcript variant X1
86. LINGO2 LINGO2 300 1.657 - - - - - 0.870 0.787 - -
87. mdkb ENSDARG00000020708 5393 1.657 - - - - - 0.902 0.755 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
88. dpysl5a ENSDARG00000011141 1827 1.657 - - - - - 0.835 0.822 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
89. entpd3 ENSDARG00000035309 263 1.657 - - - - - 0.838 0.819 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
90. her3 ENSDARG00000076857 131 1.657 - - - - - 0.838 0.819 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
91. si:ch73-21g5.7 ENSDARG00000093156 9412 1.656 - - - - - 0.884 0.772 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
92. ttll7 ENSDARG00000062973 519 1.656 - - - - - 0.865 0.791 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
93. bsk146 ENSDARG00000099069 274 1.656 - - - - - 0.855 0.801 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
94. cadm3 ENSDARG00000057013 1545 1.655 - - - - - 0.801 0.854 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
95. CR387996.1 ENSDARG00000097774 3037 1.655 0.857 - - - - 0.798 - - -
96. LRFN2 118 1.655 - - - - - 0.853 0.802 - - leucine rich repeat and fibronectin type III domain containing 2
97. zgc:153845 62 1.655 - - - - - 0.836 0.819 - - zgc:153845
98. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1.654 - - - 0.858 - - - 0.796 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
99. parp6a ENSDARG00000042703 112 1.654 - 0.868 - - - 0.786 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
100. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.654 - - - - - 0.818 0.836 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]

There are 2980 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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