Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab4b

Gene Name Gene ID Reads Annotation
rab4b ENSDARG00000012177 851 RAB4B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040822-15]










Genes with expression patterns similar to rab4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab4b ENSDARG00000012177 851 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB4B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040822-15]
2. setd5 ENSDARG00000078576 1974 1.529 - 0.788 - - - - 0.741 - - SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
3. aagab ENSDARG00000041170, ENSDARG00000117041 1042 1.518 - - - - - - 0.719 0.799 - alpha and gamma adaptin binding protein [Source:ZFIN;Acc:ZDB-GENE-040718-120]
4. tmem177 ENSDARG00000069301, ENSDARG00000113926 601 1.516 0.731 - - - - - 0.785 - - transmembrane protein 177 [Source:ZFIN;Acc:ZDB-GENE-030131-993]
5. ak4 ENSDARG00000006546 1528 1.497 - - - - 0.751 - 0.746 - - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
6. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.485 - - - - - - 0.772 0.713 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
7. med22 ENSDARG00000014148 1307 1.466 - - - - - - 0.763 0.703 - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
8. CR559945.3 CR559945.3 1029 1.435 - 0.728 - - - - 0.707 - -
9. fam219aa ENSDARG00000016396 1788 1.425 - - - - - 0.722 - 0.703 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
10. fmnl3 ENSDARG00000004372 821 0.902 - - - - - - 0.902 - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
11. arhgef1a ENSDARG00000040380 239 0.888 - - - - - - 0.888 - - Rho guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-030722-5]
12. mmaa ENSDARG00000060383, ENSDARG00000110058, ENSDARG00000115228 317 0.881 - - - - - - 0.881 - - methylmalonic aciduria (cobalamin deficiency) cblA type [Source:ZFIN;Acc:ZDB-GENE-070928-15]
13. phlda3 ENSDARG00000037804 1116 0.875 - - - - - - 0.875 - - pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
14. ctsz ENSDARG00000043081 1073 0.872 - - - - - - 0.872 - - cathepsin Z [Source:ZFIN;Acc:ZDB-GENE-041010-139]
15. cfp ENSDARG00000094451 211 0.86 - - - - - - 0.860 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
16. st3gal5 ENSDARG00000037556, ENSDARG00000109884 662 0.856 - - - - - - 0.856 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-1]
17. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 0.855 - - - - - - 0.855 - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
18. znf511 ENSDARG00000000760 446 0.849 - - - - - - 0.849 - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
19. ctssb.2 ctssb.2 122 0.846 - - - - - - 0.846 - -
20. cept1b ENSDARG00000021177 675 0.836 - - - - - - - 0.836 - choline/ethanolamine phosphotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-071004-33]
21. FRRS1_1 FRRS1_1 831 0.835 - - - - - - 0.835 - -
22. kitlga ENSDARG00000070917 155 0.835 - - - - - - 0.835 - - kit ligand a [Source:ZFIN;Acc:ZDB-GENE-070424-1]
23. KAT5 KAT5 623 0.83 - - - - - - - 0.830 -
24. CABZ01055500.1 CABZ01055500.1 748 0.828 - - - - - - 0.828 - -
25. wdr36 ENSDARG00000004774 887 0.824 - - - - - - 0.824 - - WD repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-030131-464]
26. usp25 ENSDARG00000012314 734 0.822 - - - - - 0.822 - - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
27. s1pr5a ENSDARG00000040526 923 0.82 - - - - - - 0.820 - - sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
28. zgc:136474 zgc:136474 658 0.819 - - - - - - 0.819 - -
29. tcp11l2 ENSDARG00000027316 1906 0.815 - 0.815 - - - - - - - t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
30. aldh3a2a ENSDARG00000028259 591 0.809 - 0.809 - - - - - - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
31. HECW1 HECW1 1531 0.806 - - - - - - - 0.806 -
32. gro2 gro2 1404 0.806 - - - - - - 0.806 - -
33. pnpla3 ENSDARG00000102020 163 0.804 - - - - - - 0.804 - - patatin-like phospholipase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-27]
34. lcp1 ENSDARG00000023188 298 0.804 - - - - - - 0.804 - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
35. letm1 ENSDARG00000056978, ENSDARG00000110254 1079 0.803 - 0.803 - - - - - - - leucine zipper-EF-hand containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-154]
36. dhrs7b ENSDARG00000075726 251 0.802 - - - - - - 0.802 - - dehydrogenase/reductase (SDR family) member 7B [Source:ZFIN;Acc:ZDB-GENE-050417-277]
37. mysm1 ENSDARG00000034693 291 0.802 - - - - - - 0.802 - - Myb-like, SWIRM and MPN domains 1 [Source:ZFIN;Acc:ZDB-GENE-041014-28]
38. tdrkh ENSDARG00000053474, ENSDARG00000115911 277 0.802 - - - - - - 0.802 - - tudor and KH domain containing [Source:ZFIN;Acc:ZDB-GENE-050327-81]
39. ccr12.3 ccr12.3 79 0.802 - - - - - - 0.802 - -
40. ece1 ENSDARG00000061737 91 0.801 - - - - - - 0.801 - - endothelin converting enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-061110-100]
41. sorbs3 ENSDARG00000037476 511 0.799 - - - - - - 0.799 - - sorbin and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-1]
42. snai1a ENSDARG00000056995 1427 0.798 - - - - - - 0.798 - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
43. dact1 ENSDARG00000101635 1303 0.797 - - - - - - 0.797 - - dishevelled-binding antagonist of beta-catenin 1 [Source:ZFIN;Acc:ZDB-GENE-040623-3]
44. csrp2bp 2642 0.797 - - - - - - 0.797 - - csrp2 binding protein
45. si:dkey-226l10.6 ENSDARG00000087483 1651 0.796 - 0.796 - - - - - - - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
46. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 0.795 - 0.795 - - - - - - - ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
47. nudt2 ENSDARG00000058728 371 0.795 - - - - - - 0.795 - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
48. mast4 1164 0.795 - - - - - 0.795 - - - microtubule associated serine/threonine kinase family member 4, transcript variant X6
49. calcrla ENSDARG00000011473 1324 0.795 - - - - - - - 0.795 - calcitonin receptor-like a [Source:ZFIN;Acc:ZDB-GENE-040822-26]
50. ppp3ca ENSDARG00000004988 615 0.794 - - - - - - - 0.794 - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
51. NBL1 428 0.794 - - - - - - 0.794 - - neuroblastoma 1, DAN family BMP antagonist
52. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 0.793 - 0.793 - - - - - - - cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
53. stard13a ENSDARG00000079542 723 0.793 - - - - - - 0.793 - - StAR-related lipid transfer (START) domain containing 13a [Source:ZFIN;Acc:ZDB-GENE-091116-18]
54. cox14 ENSDARG00000092124 2229 0.793 - 0.793 - - - - - - - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
55. rhogb ENSDARG00000004301 358 0.792 - - - - - - 0.792 - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
56. ncs1a ENSDARG00000055229 310 0.792 - - - - - - 0.792 - - neuronal calcium sensor 1a [Source:ZFIN;Acc:ZDB-GENE-021220-1]
57. atp6v0a1a ENSDARG00000020847 1250 0.791 - - - - - - 0.791 - - ATPase H+ transporting V0 subunit a1a [Source:ZFIN;Acc:ZDB-GENE-030131-3027]
58. C10H12orf44 C10H12orf44 787 0.789 - - - - - 0.789 - - -
59. pptc7b ENSDARG00000052658 1756 0.789 - - - - - - - 0.789 - PTC7 protein phosphatase homolog b [Source:ZFIN;Acc:ZDB-GENE-081105-111]
60. il6r ENSDARG00000104474 150 0.788 - - - - - - 0.788 - - interleukin 6 receptor [Source:ZFIN;Acc:ZDB-GENE-080107-7]
61. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.787 - - - - - - 0.787 - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
62. taf7 ENSDARG00000019572 1305 0.787 - - - - - - - 0.787 - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
63. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 0.787 - - - - - 0.787 - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
64. pnp5b ENSDARG00000099802 551 0.786 - - - - - - 0.786 - - purine nucleoside phosphorylase 5b [Source:ZFIN;Acc:ZDB-GENE-040912-54]
65. cpt1a cpt1a 674 0.786 - - - - - - 0.786 - -
66. LRRC10B 94 0.785 - - - - - - 0.785 - - leucine rich repeat containing 10B
67. dgcr6 ENSDARG00000005500 479 0.782 - - - - - - 0.782 - - DiGeorge syndrome critical region gene 6 [Source:ZFIN;Acc:ZDB-GENE-040912-125]
68. ssbp1 ENSDARG00000039350 809 0.782 - - - - - - - 0.782 - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
69. TMEM14A ENSDARG00000095157 611 0.781 - - - - - - - 0.781 - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
70. zbtb7a ENSDARG00000039899 577 0.781 - - - - - - 0.781 - - zinc finger and BTB domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-050208-583]
71. limk2 ENSDARG00000005104 2598 0.78 - 0.780 - - - - - - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
72. FBLIM1 ENSDARG00000071558 1793 0.778 - 0.778 - - - - - - - filamin binding LIM protein 1 [Source:ZFIN;Acc:ZDB-GENE-061013-662]
73. ly75 ENSDARG00000053113 196 0.776 - - - - - - 0.776 - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
74. hoxb10a ENSDARG00000011579 2135 0.775 - 0.775 - - - - - - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
75. kif13ba ENSDARG00000079731 1726 0.774 - - - - - - - 0.774 - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
76. b9d2 ENSDARG00000017385 424 0.774 - - - - - - 0.774 - - B9 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-90]
77. gcm2 ENSDARG00000045413 417 0.774 - - - - - - 0.774 - - glial cells missing homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050127-1]
78. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.773 - - - - - - 0.773 - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
79. si:dkeyp-117b11.2 ENSDARG00000076419 143 0.773 - - - - - - 0.773 - - si:dkeyp-117b11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-454]
80. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 0.773 - - - - - - 0.773 - - tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
81. hspa5 ENSDARG00000103846 4661 0.773 - - - - - - 0.773 - - heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
82. RNF157 ENSDARG00000057481 215 0.773 - - - - - - 0.773 - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
83. nfatc2ip ENSDARG00000011360 603 0.773 - - - - - - - 0.773 - nuclear factor of activated T cells 2 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-9520]
84. zic1 ENSDARG00000015567 2520 0.773 - - - - - - - 0.773 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
85. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.772 - - - - - - 0.772 - -
86. txndc12 ENSDARG00000038980 795 0.771 - - - - - - 0.771 - - thioredoxin domain containing 12 (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-050522-497]
87. ical1 ENSDARG00000057688 357 0.77 - - - - - 0.770 - - - islet cell autoantigen 1-like [Source:ZFIN;Acc:ZDB-GENE-030910-4]
88. ptpn4a ENSDARG00000000631, ENSDARG00000112876 626 0.77 0.770 - - - - - - - - protein tyrosine phosphatase, non-receptor type 4a [Source:ZFIN;Acc:ZDB-GENE-030616-449]
89. sufu ENSDARG00000056801 1543 0.769 - - - - - - 0.769 - - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
90. CU929119.2 CU929119.2 859 0.769 - - 0.769 - - - - - -
91. PPP1R8 PPP1R8 1897 0.769 - 0.769 - - - - - - -
92. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 0.769 0.769 - - - - - - - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
93. cdon ENSDARG00000061328 1441 0.768 - - - - - - - 0.768 - cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-021115-4]
94. atg4a ENSDARG00000014531 481 0.767 - - - - - - 0.767 - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
95. reep5 ENSDARG00000100742 1470 0.767 - - - - - - 0.767 - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
96. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 0.766 - - - - - 0.766 - - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
97. fignl1 ENSDARG00000016427 636 0.766 - - - - - - 0.766 - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
98. ZNF576 ZNF576 1447 0.766 - - - - - - - 0.766 -
99. prrg4 ENSDARG00000030753 1008 0.766 - - - - - - 0.766 - - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
100. slc35d1a ENSDARG00000011973 670 0.766 - - - - - - - 0.766 - solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1a [Source:ZFIN;Acc:ZDB-GENE-040826-5]

There are 291 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA