Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab4a

Gene Name Gene ID Reads Annotation
rab4a ENSDARG00000019144 192 RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]










Genes with expression patterns similar to rab4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab4a ENSDARG00000019144 192 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB4a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040525-1]
2. ZBTB22 ZBTB22 1053 2.504 - 0.750 - 0.919 - - 0.835 - -
3. myo1f ENSDARG00000078734 100 2.393 - 0.724 - 0.905 - - - - 0.764 myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
4. adam8a ENSDARG00000001452 316 2.36 0.717 - 0.725 0.918 - - - - - ADAM metallopeptidase domain 8a [Source:ZFIN;Acc:ZDB-GENE-030616-622]
5. iscub ENSDARG00000026582, ENSDARG00000115112 147 2.297 - 0.760 - - - - 0.716 - 0.821 iron-sulfur cluster assembly enzyme b [Source:ZFIN;Acc:ZDB-GENE-050417-332]
6. si:dkey-15h14.4 si:dkey-15h14.4 118 1.788 - 0.855 - 0.933 - - - - -
7. ANKRD13D ENSDARG00000098140 88 1.786 0.888 - - 0.898 - - - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
8. KBTBD13_1 KBTBD13_1 116 1.719 - - - 0.866 - 0.853 - - -
9. si:ch211-110p13.9 ENSDARG00000093821 82 1.706 0.888 - - 0.818 - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
10. zgc:112977 ENSDARG00000071741 109 1.68 - 0.774 - - - 0.906 - - - zgc:112977 [Source:ZFIN;Acc:ZDB-GENE-050327-98]
11. KCNG2 ENSDARG00000035961 58 1.676 0.888 - - - - - - - 0.788 potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
12. cntn5 ENSDARG00000021584 30 1.671 0.823 - - - - 0.848 - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
13. fam19a5 fam19a5 8 1.668 0.823 - - - - 0.845 - - -
14. si:dkey-156m18.1 si:dkey-156m18.1 13 1.668 0.823 - - - - 0.845 - - -
15. si:dkey-208k4.1 si:dkey-208k4.1 15 1.668 0.823 - - - - 0.845 - - -
16. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1.668 0.823 - - - - 0.845 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
17. si:ch73-155e10.1 si:ch73-155e10.1 13 1.668 0.823 - - - - 0.845 - - -
18. si:dkey-23a23.2 ENSDARG00000023036 123 1.654 0.864 - - 0.790 - - - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
19. CD44 CD44 11 1.652 0.823 - - - - 0.829 - - -
20. ncam2 ENSDARG00000017466 175 1.647 0.888 - - - - 0.759 - - - neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
21. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.645 - - - - 0.800 0.845 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
22. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.644 0.823 - - 0.821 - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
23. arhgap35 254 1.637 - 0.839 - - - 0.798 - - - Rho GTPase activating protein 35b, transcript variant X2
24. BX323449.2 BX323449.2 50 1.637 - - - 0.932 - - - - 0.705
25. tecrl2 tecrl2 11 1.636 0.823 - - - - 0.813 - - -
26. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1.635 0.790 - - - - 0.845 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
27. mms19 ENSDARG00000079067 65 1.629 0.823 - - - 0.806 - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
28. dclk2 dclk2 719 1.625 - - - 0.845 - 0.780 - - -
29. RSF1_1 RSF1_1 62 1.613 0.771 0.842 - - - - - - -
30. FP017295.1 ENSDARG00000091185 22 1.609 0.823 0.786 - - - - - - -
31. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.599 - - - - - 0.825 0.774 - - ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
32. dnajc17 ENSDARG00000104959 70 1.591 - 0.771 - - - - 0.820 - - DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:ZFIN;Acc:ZDB-GENE-040426-894]
33. igsf21a ENSDARG00000031049 165 1.586 - - - 0.874 - 0.712 - - - immunoglobin superfamily, member 21a [Source:ZFIN;Acc:ZDB-GENE-050809-118]
34. ch25hl2 ENSDARG00000038728 100 1.584 0.823 - - - 0.761 - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
35. KCNJ3 KCNJ3 24 1.583 - 0.724 - - - 0.859 - - -
36. scpp8 ENSDARG00000093124 54 1.569 - 0.724 - - - 0.845 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
37. CR847511.1 CR847511.1 80 1.568 0.812 - - - - - 0.756 - -
38. NPAS3 ENSDARG00000109820 362 1.559 0.766 - - - 0.793 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
39. asic4a ENSDARG00000025162 25 1.559 0.820 - - - - - - - 0.739 acid-sensing (proton-gated) ion channel family member 4a [Source:ZFIN;Acc:ZDB-GENE-040513-5]
40. inpp5e ENSDARG00000103926 567 1.556 0.840 - - - - - - - 0.716 inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
41. BX640547.1_1 ENSDARG00000092775 76 1.556 - 0.736 - - - - 0.820 - - uncharacterized LOC110439536 [Source:NCBI gene;Acc:110439536]
42. arnt ENSDARG00000021855, ENSDARG00000115999 32 1.552 - - - - 0.806 - - - 0.746 aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
43. KCNAB1 KCNAB1 918 1.548 0.823 - - - - 0.725 - - -
44. rgs7bpa ENSDARG00000060601 138 1.541 - 0.710 - - - 0.831 - - - regulator of G protein signaling 7 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060929-380]
45. pik3r5 ENSDARG00000102762 56 1.538 - 0.724 - - - 0.814 - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
46. zgc:91811 zgc:91811 186 1.537 0.796 0.741 - - - - - - -
47. ANO7 ANO7 54 1.528 - - - - 0.757 - - - 0.771
48. crygn2 ENSDARG00000030411 2551 1.521 0.740 - - - - - 0.781 - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
49. cx34.4 ENSDARG00000075854 168 1.519 0.756 0.763 - - - - - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
50. gng2_1 ENSDARG00000056831 113 1.505 - 0.724 - - 0.781 - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
51. vrk3 ENSDARG00000036056 424 1.483 - - - 0.781 - 0.702 - - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
52. rapgef5b ENSDARG00000074307 112 1.479 - - - - - 0.747 - - 0.732 Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
53. ncam1a ENSDARG00000056181 193 1.476 0.710 - - - - 0.766 - - - neural cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-990415-31]
54. p2rx3b ENSDARG00000029718 105 1.467 0.760 - - - - 0.707 - - - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
55. mapk11 ENSDARG00000045836 846 1.44 0.712 - - - - 0.728 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
56. CR382298.2 CR382298.2 1083 1.415 - - - 0.708 - - 0.707 - -
57. GPSM3 GPSM3 257 0.965 - 0.965 - - - - - - -
58. CABZ01102038.1 ENSDARG00000116210 132 0.956 - - - 0.956 - - - - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
59. cdk5rap3 ENSDARG00000045092, ENSDARG00000115530 717 0.948 - - - 0.948 - - - - - CDK5 regulatory subunit associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040625-90]
60. fasn ENSDARG00000087657 99 0.946 - - - 0.946 - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
61. fer ENSDARG00000012196 83 0.934 - - - 0.934 - - - - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
62. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 0.932 - - - 0.932 - - - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
63. TRPM6 ENSDARG00000103454 15 0.932 - - - 0.932 - - - - - transient receptor potential cation channel, subfamily M, member 6 [Source:ZFIN;Acc:ZDB-GENE-111212-1]
64. zgc:162180 zgc:162180 31 0.932 - - - 0.932 - - - - -
65. strn4 ENSDARG00000102902 24 0.932 - - - 0.932 - - - - - striatin, calmodulin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-070501-3]
66. zgc:153345 ENSDARG00000055622 29 0.931 - - - 0.931 - - - - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
67. SLC39A8 ENSDARG00000056757 52 0.93 - - - 0.930 - - - - - solute carrier family 39 (zinc transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-050419-124]
68. CYP27A1_2 CYP27A1_2 5 0.928 - - - - - 0.928 - - -
69. fam151a ENSDARG00000058218 40 0.928 - - - 0.928 - - - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
70. vti1b ENSDARG00000039270 295 0.925 - - - 0.925 - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
71. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 0.924 0.924 - - - - - - - -
72. napepld ENSDARG00000009252 228 0.924 - - - 0.924 - - - - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
73. zgc:92880 zgc:92880 56 0.924 - - - 0.924 - - - - -
74. zgc:153615 ENSDARG00000038981 105 0.923 - - - 0.923 - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
75. fuom ENSDARG00000039422 82 0.922 - 0.922 - - - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
76. BX890577.2 BX890577.2 94 0.922 - 0.922 - - - - - - -
77. ankmy2a ENSDARG00000005948 141 0.919 - 0.919 - - - - - - - ankyrin repeat and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6321]
78. CABZ01067743.1 CABZ01067743.1 48 0.918 - - - 0.918 - - - - -
79. tmco4 ENSDARG00000078924 330 0.918 - - - 0.918 - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
80. LRFN2 118 0.917 - - - 0.917 - - - - - leucine rich repeat and fibronectin type III domain containing 2
81. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 0.915 - 0.915 - - - - - - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
82. fkbp10a ENSDARG00000099183 314 0.915 - - - 0.915 - - - - - FK506 binding protein 10a [Source:ZFIN;Acc:ZDB-GENE-100921-75]
83. porcn ENSDARG00000052558, ENSDARG00000111556 110 0.914 - - - 0.914 - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
84. cc2d1b ENSDARG00000099445 253 0.911 - - - 0.911 - - - - - coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]
85. gulp1b ENSDARG00000057833 382 0.911 - - - 0.911 - - - - - GULP, engulfment adaptor PTB domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-120228-2]
86. pdk4 ENSDARG00000054848 258 0.91 - - - 0.910 - - - - - pyruvate dehydrogenase kinase, isozyme 4 [Source:ZFIN;Acc:ZDB-GENE-060503-754]
87. gnai3 ENSDARG00000030644 29 0.91 - - - - - 0.910 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
88. zbtb43 ENSDARG00000045983 343 0.91 - - - - - 0.910 - - - zinc finger and BTB domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-060526-378]
89. MAP3K6 MAP3K6 181 0.908 - - - 0.908 - - - - -
90. glg1b ENSDARG00000101210 177 0.907 - - - 0.907 - - - - - golgi glycoprotein 1b [Source:ZFIN;Acc:ZDB-GENE-060825-255]
91. mid1 ENSDARG00000060482 154 0.906 - - - 0.906 - - - - - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
92. GAB3 GAB3 72 0.905 - - - 0.905 - - - - -
93. PEG3_12 PEG3_12 128 0.904 - 0.904 - - - - - - -
94. CR376785.2 CR376785.2 175 0.902 - - - 0.902 - - - - -
95. mettl20 56 0.902 - - - 0.902 - - - - - methyltransferase like 20
96. mtmr7a ENSDARG00000037101, ENSDARG00000111336 161 0.901 - - - 0.901 - - - - - myotubularin related protein 7a [Source:ZFIN;Acc:ZDB-GENE-060421-7754]
97. pif1 ENSDARG00000020289 216 0.9 - - - 0.900 - - - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
98. matk ENSDARG00000074670 225 0.899 - - - 0.899 - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
99. dclre1a ENSDARG00000091768 94 0.899 0.899 - - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
100. slc8a4a ENSDARG00000055154 90 0.899 0.899 - - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-060110-2]

There are 1307 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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