Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab43

Gene Name Gene ID Reads Annotation
rab43 ENSDARG00000059404 1118 RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]










Genes with expression patterns similar to rab43

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab43 ENSDARG00000059404 1118 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
2. brd1a ENSDARG00000013596, ENSDARG00000116694 547 1.747 - - - - - 0.763 - 0.984 - bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
3. znf319 znf319 3027 1.724 - - - - - 0.795 - 0.929 -
4. AP3B2 1874 1.72 - 0.751 - - - - - 0.969 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
5. suco ENSDARG00000016532 1609 1.719 - - - - - - 0.744 0.975 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
6. pcif1 ENSDARG00000099084 2851 1.715 - - - - - 0.747 - 0.968 - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
7. mthfd2_1 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 2390 1.713 0.751 - - - - - - 0.962 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
8. actn2 actn2 1054 1.705 - 0.732 - - - - - 0.973 -
9. gipc1 ENSDARG00000104483 2913 1.696 - 0.733 - - - - - 0.963 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
10. DVL3 1098 1.696 - - - - - 0.720 - 0.976 - dishevelled segment polarity protein 3
11. Sep-06 Sep-06 5465 1.694 - 0.724 - - - - - 0.970 -
12. impdh1b ENSDARG00000029524 7472 1.692 - 0.775 - - - - - 0.917 - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
13. slc1a2b ENSDARG00000102453 3136 1.688 - 0.731 - - - - - 0.957 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
14. pcyt1aa ENSDARG00000011233 1985 1.685 - - - - - 0.791 - 0.894 - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
15. casc4 ENSDARG00000074490 2019 1.637 - 0.700 - - - - - 0.937 - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
16. CDCA4 ENSDARG00000042319 7918 1.628 - - - - - 0.708 - 0.920 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
17. dnaja2l ENSDARG00000010745 2367 1.618 - 0.766 - - - - - 0.852 - DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
18. yth2 yth2 3716 1.609 - 0.716 - - - - - 0.893 -
19. nutf2l ENSDARG00000014499 3927 1.597 - - - 0.753 - - - 0.844 - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
20. wdr43 ENSDARG00000077264 1992 1.575 - 0.701 - - - 0.874 - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
21. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.554 - 0.766 - - - 0.788 - - - putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
22. CT027778.1 CT027778.1 265 1.531 - 0.734 - - - - 0.797 - -
23. srcap ENSDARG00000005236 1740 1.512 - - - 0.732 - 0.780 - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
24. nme7 ENSDARG00000056193 291 1.505 - 0.788 - - - 0.717 - - - NME/NM23 family member 7 [Source:ZFIN;Acc:ZDB-GENE-000210-35]
25. cwc22 ENSDARG00000014008 2385 1.501 - - - - - - 0.787 0.714 - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
26. CABZ01085858.1 CABZ01085858.1 355 1.475 - 0.764 - - - 0.711 - - -
27. grm4 ENSDARG00000040156 342 1.473 - - - 0.741 - 0.732 - - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
28. eif3m ENSDARG00000013931 8117 1.467 - 0.731 - - - - - 0.736 - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
29. CR387996.2 CR387996.2 1272 1.464 - 0.708 - 0.756 - - - - -
30. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.434 - 0.706 - - - 0.728 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
31. eftud2 ENSDARG00000012261 3081 1.406 - 0.702 - - - - - - 0.704 elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
32. smad7 ENSDARG00000016858 1660 0.987 - - - - - - - 0.987 - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
33. gltscr1l gltscr1l 782 0.987 - - - - - - - 0.987 -
34. GRM2 GRM2 372 0.987 - - - - - - - 0.987 -
35. GANAB_1 GANAB_1 685 0.984 - - - - - - - 0.984 -
36. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.984 - - - - - - - 0.984 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
37. plk4 ENSDARG00000004576 688 0.983 - - - - - - - 0.983 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
38. wdr47a ENSDARG00000078136 522 0.983 - - - - - - - 0.983 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
39. PRRT2 ENSDARG00000103588 913 0.983 - - - - - - - 0.983 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
40. pcdh10b ENSDARG00000102824 732 0.983 - - - - - - - 0.983 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
41. RBM33 RBM33 1954 0.983 - - - - - - - 0.983 -
42. irf2a ENSDARG00000007387 915 0.983 - - - - - - - 0.983 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
43. epb41a ENSDARG00000099283 860 0.983 - - - - - - - 0.983 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
44. si:ch211-113e8.11 ENSDARG00000076585 721 0.982 - - - - - - - 0.982 - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
45. wdr92 ENSDARG00000037334 329 0.982 - - - - - - - 0.982 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
46. bsk146 ENSDARG00000099069 274 0.982 - - - - - - - 0.982 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
47. psmd5 ENSDARG00000059046 622 0.982 - - - - - - - 0.982 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
48. DEDD ENSDARG00000029783 530 0.982 - - - - - - - 0.982 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
49. sh3bp5a ENSDARG00000100529 642 0.982 - - - - - - - 0.982 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
50. ndnl2 ENSDARG00000058212 1042 0.982 - - - - - - - 0.982 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
51. CR354611.2 CR354611.2 2040 0.982 - - - - - - - 0.982 -
52. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.982 - - - - - - - 0.982 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
53. map7d2b ENSDARG00000045316 702 0.982 - - - - - - - 0.982 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
54. eef1a1a ENSDARG00000039502 234 0.981 - - - - - - - 0.981 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
55. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.981 - - - - - - - 0.981 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
56. ppp1r8 ppp1r8 310 0.981 - - - - - - - 0.981 -
57. ift20 ENSDARG00000040556 285 0.981 - - - - - - - 0.981 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
58. anapc5 ENSDARG00000008461 434 0.981 - - - - - - - 0.981 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
59. crb2a ENSDARG00000060106 1307 0.981 - - - - - - - 0.981 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
60. U6 U6 931 0.981 - - - - - - - 0.981 -
61. tchp ENSDARG00000035605 1695 0.981 - - - - - - - 0.981 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
62. rapgef1a ENSDARG00000043593 416 0.981 - - - - - - - 0.981 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
63. lrrc4.2 ENSDARG00000003020 235 0.981 - - - - - - - 0.981 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
64. KIRREL3 ENSDARG00000115903 206 0.981 - - - - - - - 0.981 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
65. XKR7 ENSDARG00000026333 175 0.98 - - - - - - - 0.980 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
66. dock7 ENSDARG00000078675 1995 0.98 - - - - - - - 0.980 - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
67. TTC28 ENSDARG00000114920 580 0.98 - - - - - - - 0.980 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
68. dennd5a ENSDARG00000017006 3426 0.98 - - - - - - - 0.980 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
69. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.98 - - - - - - - 0.980 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
70. napg napg 645 0.98 - - - - - - - 0.980 -
71. zgc:171727 ENSDARG00000105781 350 0.98 - - - - - - - 0.980 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
72. MANEAL ENSDARG00000056450 262 0.98 - - - - - - - 0.980 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
73. MDFIC ENSDARG00000074223 781 0.98 - - - - - - - 0.980 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
74. SIPA1L3 ENSDARG00000061699 268 0.98 - - - - - - - 0.980 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
75. B3GNT1 B3GNT1 601 0.98 - - - - - - - 0.980 -
76. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 0.98 - - - - - - - 0.980 - kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
77. cetn2 ENSDARG00000101510 541 0.98 - - - - - - - 0.980 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
78. SB:CB827 SB:CB827 245 0.98 - - - - - - - 0.980 -
79. pold3 ENSDARG00000076169 694 0.979 - - - - - - - 0.979 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
80. sgsm3 ENSDARG00000019038 352 0.979 - - - - - - - 0.979 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
81. BX322612.1 BX322612.1 236 0.979 - - - - - - - 0.979 -
82. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.979 - - - - - - - 0.979 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
83. E2F1 ENSDARG00000103868 638 0.979 - - - - - - - 0.979 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
84. zgc:65772 zgc:65772 2092 0.979 - - - - - - - 0.979 -
85. xkr6 xkr6 286 0.979 - - - - - - - 0.979 -
86. ZNF784_2 ZNF784_2 181 0.979 - - - - - - - 0.979 -
87. THEM4 ENSDARG00000061621 364 0.979 - - - - - - - 0.979 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
88. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 0.979 - - - - - - - 0.979 - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
89. ankrd10b ENSDARG00000004771 654 0.979 - - - - - - - 0.979 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
90. chd5 ENSDARG00000105083 132 0.979 - - - - - - - 0.979 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
91. nkain4 ENSDARG00000062699 377 0.979 - - - - - - - 0.979 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
92. grna ENSDARG00000004954 189 0.979 - - - - - - - 0.979 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
93. CABZ01073424.1 ENSDARG00000107858 688 0.978 - - - - - - - 0.978 -
94. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.978 - - - - - - - 0.978 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
95. ift46 ENSDARG00000011240 2499 0.978 - - - - - - - 0.978 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
96. prkag1 ENSDARG00000003818 2800 0.978 - - - - - - - 0.978 - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
97. fstl5 ENSDARG00000040198 213 0.978 - - - - - - - 0.978 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
98. fzd3b ENSDARG00000058692 627 0.978 - - - - - - - 0.978 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
99. mapre3b ENSDARG00000102878 362 0.978 - - - - - - - 0.978 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
100. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.978 - - - - - - - 0.978 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]

There are 881 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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