Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab40c

Gene Name Gene ID Reads Annotation
rab40c ENSDARG00000061208 1072 RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]










Genes with expression patterns similar to rab40c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab40c ENSDARG00000061208 1072 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
2. tmem150a tmem150a 543 1.749 - 0.955 - - - - 0.794 - -
3. neil3 ENSDARG00000020079, ENSDARG00000111296 397 1.721 0.763 0.958 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
4. map7d1b ENSDARG00000104701 1655 1.676 - 0.912 - - - - 0.764 - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
5. f7 ENSDARG00000034862 405 1.669 0.756 0.913 - - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
6. EDEM3 ENSDARG00000074129 805 1.659 - 0.903 - - - 0.756 - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
7. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.64 0.745 0.895 - - - - - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
8. birc5a ENSDARG00000075621 2256 1.632 - 0.932 - - - - 0.700 - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
9. arhgef16 ENSDARG00000077114 759 1.614 - 0.864 - - - 0.750 - - - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
10. flt4 ENSDARG00000104453 557 1.613 0.703 0.910 - - - - - - - fms-related tyrosine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-980526-326]
11. psmg1 ENSDARG00000040620 1359 1.605 - - - - - - 0.832 0.773 - proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]
12. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.573 0.729 0.844 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
13. setd8b 2528 1.572 - 0.838 - - - - 0.734 - - SET domain containing (lysine methyltransferase) 8b
14. PDZD8 ENSDARG00000088699 844 1.559 0.728 0.831 - - - - - - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
15. ppp6c ENSDARG00000002949 2948 1.546 0.734 - - - - - 0.812 - - protein phosphatase 6, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-949]
16. arpp19b ENSDARG00000039880 4823 1.51 - - - - - 0.743 0.767 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
17. tmem9b ENSDARG00000025693 2693 1.45 0.739 - - - - 0.711 - - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
18. vgll4a ENSDARG00000094332 1410 1.446 0.736 - - - - - 0.710 - - vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]
19. ccdc85ca ENSDARG00000005232 3218 1.424 - 0.716 - - - - 0.708 - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
20. kremen1 ENSDARG00000062579 190 0.969 - 0.969 - - - - - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
21. CABZ01066717.1 CABZ01066717.1 351 0.968 - 0.968 - - - - - - -
22. casp2 ENSDARG00000062052 559 0.967 - 0.967 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
23. pgap2 ENSDARG00000044596 60 0.967 - 0.967 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
24. zgc:113385 zgc:113385 297 0.966 - 0.966 - - - - - - -
25. si:dkey-154p10.3 ENSDARG00000068366 153 0.963 - 0.963 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
26. NUDT8 ENSDARG00000007722 329 0.962 - 0.962 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
27. esrrd ENSDARG00000015064 291 0.962 - 0.962 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
28. CYSTM1 CYSTM1 176 0.962 - 0.962 - - - - - - -
29. CR376783.1 ENSDARG00000074235 259 0.961 - 0.961 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
30. cacng6a ENSDARG00000036457 344 0.96 - 0.960 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
31. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.96 - 0.960 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
32. fam63b 484 0.958 - 0.958 - - - - - - - family with sequence similarity 63, member B
33. foxn4 ENSDARG00000010591 2332 0.957 - 0.957 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
34. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.956 - 0.956 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
35. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.956 - 0.956 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
36. CT573322.1 CT573322.1 38 0.956 - 0.956 - - - - - - -
37. si:ch1073-155h21.1 ENSDARG00000007582 137 0.956 - 0.956 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
38. CABZ01114089.1 CABZ01114089.1 127 0.956 - 0.956 - - - - - - -
39. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.955 - 0.955 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
40. si:dkey-228i19.34 si:dkey-228i19.34 43 0.954 - 0.954 - - - - - - -
41. ppapdc2 ppapdc2 67 0.954 - 0.954 - - - - - - -
42. si:ch73-18b11.2 ENSDARG00000094978 148 0.954 - 0.954 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
43. tex261 ENSDARG00000044584 513 0.954 - 0.954 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
44. U3_5 U3_5 67 0.954 - 0.954 - - - - - - -
45. CABZ01109624.1 CABZ01109624.1 25 0.954 - 0.954 - - - - - - -
46. RNF130 ENSDARG00000089767 559 0.954 - 0.954 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
47. si:ch211-39a7.1 ENSDARG00000037427 31 0.954 - 0.954 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
48. ZP2 ZP2 14 0.954 - 0.954 - - - - - - -
49. SLC38A9 ENSDARG00000032769 35 0.954 - 0.954 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
50. si:ch211-105d18.6 si:ch211-105d18.6 59 0.953 - 0.953 - - - - - - -
51. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.953 - 0.953 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
52. MAP3K2 ENSDARG00000062884 34 0.953 - 0.953 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
53. TEAD1 TEAD1 43 0.953 - 0.953 - - - - - - -
54. TM2D2 ENSDARG00000035515 561 0.953 - 0.953 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
55. UBASH3B UBASH3B 292 0.952 - 0.952 - - - - - - -
56. rnf34a ENSDARG00000038300 179 0.952 - 0.952 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
57. sowahcb ENSDARG00000059582 178 0.952 - 0.952 - - - - - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
58. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.952 - 0.952 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
59. smdt1 smdt1 99 0.952 - 0.952 - - - - - - -
60. cflara ENSDARG00000055966 464 0.952 - 0.952 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
61. kcnk13a ENSDARG00000008212 136 0.951 - 0.951 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
62. lrrc6 ENSDARG00000053318 146 0.951 - 0.951 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
63. usp45 ENSDARG00000075013 227 0.95 - 0.950 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
64. lcn15 ENSDARG00000067851 140 0.95 - 0.950 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
65. C12H10orf2 C12H10orf2 245 0.95 - 0.950 - - - - - - -
66. alg9 ENSDARG00000012840 631 0.949 - 0.949 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
67. serpine2 ENSDARG00000029353 2274 0.949 - 0.949 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
68. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.949 - 0.949 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
69. CR388047.3 ENSDARG00000117023 89 0.948 - 0.948 - - - - - - -
70. ACKR3 ACKR3 235 0.948 - 0.948 - - - - - - -
71. si:dkey-114b16.4 si:dkey-114b16.4 35 0.948 - 0.948 - - - - - - -
72. cyp2aa1 ENSDARG00000099003 297 0.948 - 0.948 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
73. kcnj1a.4 ENSDARG00000090635 356 0.947 - 0.947 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
74. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.947 - 0.947 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
75. fam57ba ENSDARG00000026875 504 0.947 - 0.947 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
76. zgc:109744 ENSDARG00000070800 262 0.947 - 0.947 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
77. unc13d ENSDARG00000078249 91 0.946 - 0.946 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
78. cmasb 499 0.946 - 0.946 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
79. pddc1 pddc1 257 0.946 - 0.946 - - - - - - -
80. BX005085.1 ENSDARG00000089947 230 0.944 - 0.944 - - - - - - -
81. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.944 - 0.944 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
82. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 0.943 - 0.943 - - - - - - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
83. atp11c ENSDARG00000036442, ENSDARG00000116165 336 0.943 - 0.943 - - - - - - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
84. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.943 - 0.943 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
85. plce1 ENSDARG00000087921 44 0.943 - 0.943 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
86. BX005256.1 ENSDARG00000106112 467 0.942 - 0.942 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
87. C13H10orf32 C13H10orf32 465 0.942 - 0.942 - - - - - - -
88. cd74a ENSDARG00000009087 20 0.942 - 0.942 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
89. wnt7aa ENSDARG00000044827 645 0.942 - 0.942 - - - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
90. rab33ba ENSDARG00000052290 914 0.941 - 0.941 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
91. sh3pxd2aa ENSDARG00000060148 913 0.94 - 0.940 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
92. gga3 ENSDARG00000103667 675 0.94 - 0.940 - - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
93. fbxo42 ENSDARG00000087545 262 0.939 - 0.939 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
94. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.939 - 0.939 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
95. casp3b ENSDARG00000055045 54 0.939 - 0.939 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
96. RBMS1 RBMS1 258 0.938 - 0.938 - - - - - - -
97. tspan2 tspan2 948 0.938 - 0.938 - - - - - - -
98. tbcelb ENSDARG00000019525 299 0.938 - 0.938 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
99. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.937 - 0.937 - - - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
100. ATP5J 343 0.937 - 0.937 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2

There are 694 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA