Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab3ip

Gene Name Gene ID Reads Annotation
rab3ip ENSDARG00000101908 556 RAB3A interacting protein (rabin3) [Source:ZFIN;Acc:ZDB-GENE-050522-323]










Genes with expression patterns similar to rab3ip

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab3ip ENSDARG00000101908 556 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB3A interacting protein (rabin3) [Source:ZFIN;Acc:ZDB-GENE-050522-323]
2. plcd3a ENSDARG00000052957 467 1.598 - 0.810 - - - - 0.788 - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
3. GPRC5B GPRC5B 897 1.598 0.771 - - - - 0.827 - - -
4. vamp4 ENSDARG00000043510 595 1.58 - 0.850 - - - - - 0.730 - vesicle-associated membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-92]
5. DHX36 ENSDARG00000101059 314 1.574 - - - - - - 0.781 0.793 - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
6. eml3 ENSDARG00000058038 449 1.573 - 0.870 - - - - 0.703 - - echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
7. PTGER3 ENSDARG00000055781 187 1.561 - 0.835 - - - - 0.726 - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
8. myo7aa ENSDARG00000099871 23 1.557 0.734 0.823 - - - - - - - myosin VIIAa [Source:ZFIN;Acc:ZDB-GENE-020709-1]
9. mcu ENSDARG00000101175 1287 1.547 - 0.786 - - - - 0.761 - - mitochondrial calcium uniporter [Source:ZFIN;Acc:ZDB-GENE-061013-24]
10. sb:cb252 sb:cb252 2480 1.539 - 0.748 - - - - - 0.791 -
11. hs3st3l ENSDARG00000059903 184 1.535 0.750 - - - - - - 0.785 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
12. cyth3 cyth3 120 1.519 - 0.736 - - - - - 0.783 -
13. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 1.515 - 0.735 - - - - - 0.780 - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
14. CR848745.1 CR848745.1 814 1.507 - 0.736 - - - 0.771 - - -
15. CERS4 CERS4 319 1.506 - 0.781 - - - - - 0.725 -
16. alox5 alox5 406 1.504 - 0.751 - - - - - 0.753 -
17. tmem68 ENSDARG00000086737 209 1.497 - 0.735 - - - - - 0.762 - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
18. LRRC4C ENSDARG00000113411 36 1.495 0.708 - - - - - - 0.787 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
19. ap1s3b ENSDARG00000027966 1064 1.49 - 0.781 - - - - - 0.709 - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
20. CR382298.2 CR382298.2 1083 1.485 - 0.780 - - - - 0.705 - -
21. FAM98C FAM98C 225 1.48 - - - - - - 0.715 0.765 -
22. osbpl2a ENSDARG00000053804 1883 1.474 0.748 - - - - - 0.726 - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
23. gpd2 ENSDARG00000062430 185 1.47 - - - - - - 0.740 0.730 - glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-030131-4869]
24. tmem196b ENSDARG00000090140 20 1.469 0.708 - - - - - - 0.761 - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
25. csdc2b 82 1.456 0.741 0.715 - - - - - - - cold shock domain containing C2, RNA binding b
26. im:6904045 ENSDARG00000115174 179 1.45 - 0.702 - - - - 0.748 - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
27. CABZ01041804.1 CABZ01041804.1 312 1.449 0.708 - - - - - 0.741 - -
28. rragcb ENSDARG00000099049 631 1.43 - 0.714 - - - - - 0.716 - Ras-related GTP binding Cb [Source:ZFIN;Acc:ZDB-GENE-070705-380]
29. becn1 ENSDARG00000079128 581 1.415 0.704 - - - - 0.711 - - - beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]
30. KIF1A KIF1A 1686 0.946 - - - - - 0.946 - - -
31. CR388015.1 CR388015.1 311 0.928 - 0.928 - - - - - - -
32. tet3 ENSDARG00000062646 6672 0.927 - - - - - 0.927 - - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
33. swap70a ENSDARG00000051819 115 0.92 - 0.920 - - - - - - - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
34. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 0.92 - 0.920 - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
35. G3BP2_1 G3BP2_1 2390 0.915 - - - - - 0.915 - - -
36. golga7ba ENSDARG00000036295 1460 0.914 - - - - - 0.914 - - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
37. rnf145b ENSDARG00000032373 601 0.911 - - - - - 0.911 - - - ring finger protein 145b [Source:ZFIN;Acc:ZDB-GENE-030131-5264]
38. asap1a ENSDARG00000029463 1566 0.91 - - - - - 0.910 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
39. nudt2 ENSDARG00000058728 371 0.909 - 0.909 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
40. adam17a ENSDARG00000043213 1305 0.901 - - - - - 0.901 - - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
41. nos2b ENSDARG00000031976 935 0.896 - - - - - 0.896 - - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
42. PLEKHA2 PLEKHA2 43 0.893 - 0.893 - - - - - - -
43. kcnh6 kcnh6 59 0.892 - 0.892 - - - - - - -
44. ZBTB41 ENSDARG00000054984 464 0.891 - 0.891 - - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
45. BX548021.2_1 BX548021.2_1 164 0.889 - 0.889 - - - - - - -
46. PRKDC ENSDARG00000075083 693 0.886 - 0.886 - - - - - - - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
47. si:dkey-20i20.2 ENSDARG00000071719 659 0.885 - 0.885 - - - - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
48. CU929089.1 CU929089.1 479 0.884 - 0.884 - - - - - - -
49. SLC46A3 ENSDARG00000077313 162 0.879 - 0.879 - - - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
50. MYO5C ENSDARG00000104235 1285 0.879 - 0.879 - - - - - - - myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
51. acss3 ENSDARG00000032218 226 0.879 - 0.879 - - - - - - - acyl-CoA synthetase short chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-816]
52. prep ENSDARG00000057151 3016 0.878 - - - - - 0.878 - - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
53. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 0.877 - 0.877 - - - - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
54. zgc:66014 817 0.876 - 0.876 - - - - - - - zgc:66014, transcript variant X6
55. usp44 ENSDARG00000089861 1532 0.876 - 0.876 - - - - - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
56. SUOX ENSDARG00000091574 122 0.874 - 0.874 - - - - - - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
57. BX855614.1 ENSDARG00000094551 1294 0.873 - 0.873 - - - - - - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
58. col7a1l ENSDARG00000069692 44 0.873 - 0.873 - - - - - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
59. si:rp71-1i20.2 ENSDARG00000043198 113 0.872 - 0.872 - - - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
60. ZACN ZACN 502 0.872 - 0.872 - - - - - - -
61. strumpellin 212 0.871 - 0.871 - - - - - - - strumpellin
62. si:ch211-253p2.2 ENSDARG00000071772 64 0.869 - 0.869 - - - - - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
63. usp14 ENSDARG00000025889 2701 0.869 - - - - - 0.869 - - - ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) [Source:ZFIN;Acc:ZDB-GENE-030131-7676]
64. TBC1D8B ENSDARG00000062192 1031 0.866 - 0.866 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
65. zgc:113100 zgc:113100 647 0.866 - 0.866 - - - - - - -
66. BX890577.1 BX890577.1 257 0.866 - 0.866 - - - - - - -
67. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.866 0.866 - - - - - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
68. atp10a ENSDARG00000061039, ENSDARG00000110280 869 0.866 - 0.866 - - - - - - - ATPase phospholipid transporting 10A [Source:ZFIN;Acc:ZDB-GENE-101102-1]
69. dnajb1a ENSDARG00000099383 871 0.864 - - - - - - 0.864 - - DnaJ (Hsp40) homolog, subfamily B, member 1a [Source:ZFIN;Acc:ZDB-GENE-040801-90]
70. gucy1a3 89 0.864 - 0.864 - - - - - - - guanylate cyclase 1, soluble, alpha 3
71. erh ENSDARG00000032866 20633 0.864 - - - - - 0.864 - - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
72. hmcn1 ENSDARG00000016936 1706 0.862 - - - - - 0.862 - - - hemicentin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-322]
73. naa30 ENSDARG00000079686 814 0.862 - 0.862 - - - - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
74. crsp7 ENSDARG00000105102 1169 0.862 - - - - - - 0.862 - - cofactor required for Sp1 transcriptional activation, subunit 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2005]
75. zdhhc16b ENSDARG00000015989 193 0.861 - 0.861 - - - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
76. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 0.861 - 0.861 - - - - - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
77. MYO9B ENSDARG00000078313 97 0.859 - 0.859 - - - - - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
78. srp9 ENSDARG00000042851 3254 0.859 - - - - - 0.859 - - - signal recognition particle 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1106]
79. tmem176l.2 ENSDARG00000089399 22 0.858 - 0.858 - - - - - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
80. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.858 - 0.858 - - - - - - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
81. ticrr ENSDARG00000045605 739 0.856 - - - - - 0.856 - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
82. TTF1 ENSDARG00000091967 307 0.855 - - - - - - 0.855 - - transcription termination factor, RNA polymerase I [Source:ZFIN;Acc:ZDB-GENE-030131-6913]
83. EPS8L2 ENSDARG00000058108 484 0.853 - 0.853 - - - - - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
84. si:dkey-100n23.5 ENSDARG00000086911 427 0.853 - 0.853 - - - - - - - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
85. p2rx5 ENSDARG00000004455, ENSDARG00000112664 309 0.853 0.853 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 5 [Source:ZFIN;Acc:ZDB-GENE-030319-5]
86. atp1a1a.2 ENSDARG00000007739 121 0.853 - 0.853 - - - - - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]
87. CABZ01039859.1 ENSDARG00000076361 540 0.853 - 0.853 - - - - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
88. vezf1a ENSDARG00000008247 1449 0.852 - 0.852 - - - - - - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
89. pde4ba ENSDARG00000032868, ENSDARG00000110575 1024 0.852 - - - - - 0.852 - - - phosphodiesterase 4B, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-030131-9570]
90. rfx2 ENSDARG00000013575 1275 0.85 - - - - - 0.850 - - - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
91. si:ch211-212o1.2 ENSDARG00000011498, ENSDARG00000110768 378 0.849 - 0.849 - - - - - - - si:ch211-212o1.2 [Source:ZFIN;Acc:ZDB-GENE-041111-310]
92. CCL19_1 CCL19_1 40 0.848 - 0.848 - - - - - - -
93. si:dkey-229d2.7 ENSDARG00000092460 15 0.847 - 0.847 - - - - - - - si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
94. foxl2 61 0.847 - - - - - - - 0.847 - forkhead box L2, transcript variant X1
95. CABZ01047562.1 CABZ01047562.1 355 0.846 - 0.846 - - - - - - -
96. RNF157 ENSDARG00000057481 215 0.846 - 0.846 - - - - - - - ring finger protein 157 [Source:HGNC Symbol;Acc:HGNC:29402]
97. si:ch211-208f21.2 ENSDARG00000094177 61 0.846 - 0.846 - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
98. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 0.845 - - - - - 0.845 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
99. gnpnat1 ENSDARG00000039892 709 0.845 - - - - - 0.845 - - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
100. srek1ip1 ENSDARG00000043728 985 0.844 - 0.844 - - - - - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]

There are 1028 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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