Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab3aa

Gene Name Gene ID Reads Annotation
rab3aa ENSDARG00000056347, ENSDARG00000114357 160 RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]










Genes with expression patterns similar to rab3aa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
2. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 3.356 0.803 - - - - 0.928 0.908 0.717 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
3. ctnnd2b ENSDARG00000003779 964 3.19 0.786 0.716 - - - 0.873 0.815 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
4. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 2.647 0.888 - - - - 0.921 0.838 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
5. nhlh2 ENSDARG00000025495 1860 2.631 0.940 - - - - 0.934 0.757 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
6. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.627 0.893 - - - - 0.944 0.790 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
7. nell2b ENSDARG00000062797 854 2.625 0.855 - - - - 0.900 0.870 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
8. PRKAR2B ENSDARG00000036446 812 2.622 0.762 - - - - 0.976 0.884 - - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
9. nacad ENSDARG00000012347 1268 2.588 - 0.713 - - - 0.995 0.880 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
10. kcnc3a ENSDARG00000055855 1821 2.582 - 0.875 - - - 0.873 0.834 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
11. grin1a ENSDARG00000027828 1327 2.552 0.820 - - - - 0.904 0.828 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
12. lhx1a ENSDARG00000014018 958 2.531 0.748 - - - - 0.940 0.843 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
13. lrrc4.1 ENSDARG00000069402 323 2.505 0.849 - - - - 0.803 0.853 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
14. nova2 ENSDARG00000017673 7685 2.501 0.795 - - - - 0.858 0.848 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
15. lzts3b ENSDARG00000058558 166 2.484 0.809 - - - - 0.965 0.710 - - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
16. cadpsb ENSDARG00000070567 458 2.47 0.755 - - - - 0.939 0.776 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
17. CABZ01111990.1 CABZ01111990.1 4374 2.454 0.721 - - - - 0.876 0.857 - -
18. nrarpb ENSDARG00000018958 6225 2.451 0.884 - - - - 0.735 0.832 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
19. CHL1 CHL1 1553 2.449 0.750 - - - - 0.846 0.853 - -
20. dtnbp1b ENSDARG00000055206 64 2.429 0.748 - - - - 0.943 0.738 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
21. tmie ENSDARG00000069423 305 2.419 0.738 - - - - 0.825 0.856 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
22. fgf13b ENSDARG00000056633 455 2.411 - - - - - 0.898 0.803 0.710 - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
23. odz4 odz4 822 2.406 - 0.715 - - - 0.846 0.845 - -
24. slc35g2b ENSDARG00000045447 378 2.4 0.768 - - - - 0.914 0.718 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
25. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.39 - 0.752 - - - 0.847 0.791 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
26. her4.1 ENSDARG00000056732 1264 2.389 0.834 - - - - 0.844 0.711 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
27. tuba1c ENSDARG00000055216 8384 2.386 0.741 - - - - 0.804 0.841 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
28. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.38 0.701 - - - - 0.837 0.842 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
29. PPP2R5B ENSDARG00000054931 213 2.354 0.743 - - - - 0.836 0.775 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
30. syt12 ENSDARG00000101776 215 2.352 0.767 - - - - 0.767 0.818 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
31. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.348 0.704 - - - - 0.901 0.743 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
32. CHRNB4 ENSDARG00000101677 128 2.346 0.747 - - - - 0.720 0.879 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
33. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.342 - - - - - 0.802 0.804 0.736 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
34. nes ENSDARG00000088805 2710 2.34 0.813 - - - - 0.764 0.763 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
35. calca ENSDARG00000056590 150 2.322 0.757 - - - - 0.815 0.750 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
36. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 2.321 0.712 - - - - 0.823 0.786 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
37. pitpnab ENSDARG00000044091 306 2.301 0.728 0.797 - - - 0.776 - - - phosphatidylinositol transfer protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-110408-51]
38. fsd1 ENSDARG00000062017 207 2.301 0.775 - - - - 0.726 0.800 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
39. gfap ENSDARG00000025301 5584 2.301 0.729 - - - - 0.727 0.845 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
40. vim ENSDARG00000010008 3551 2.286 0.704 - - - - 0.780 0.802 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
41. fam219ab ENSDARG00000013813 591 2.283 - - - - - 0.769 0.811 0.703 - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
42. fam43b ENSDARG00000070222 92 2.254 0.740 - - - - 0.719 0.795 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
43. BX511121.1 ENSDARG00000029997 1774 2.253 0.706 - - - - 0.791 0.756 - -
44. STMN3 ENSDARG00000038465 1009 2.245 0.703 - - - - 0.719 0.823 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
45. GLRA3 ENSDARG00000011066 242 2.242 0.714 - - - - 0.740 0.788 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
46. SSBP4 ENSDARG00000056483 5156 2.225 - 0.711 - - - 0.736 0.778 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
47. DNER ENSDARG00000061031 123 2.188 0.705 - - - - 0.740 0.743 - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
48. BAI1 BAI1 173 2.155 0.707 - - - - 0.719 0.729 - -
49. atp6v0a1b ENSDARG00000015174 1052 1.859 - - - - - 0.922 0.937 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
50. slc8a2b ENSDARG00000100592 598 1.84 - - - - - 0.987 0.853 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
51. dnajc5aa ENSDARG00000042948 2885 1.826 - - - - - 0.930 0.896 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
52. SPTBN4_1 ENSDARG00000092624 473 1.825 - - - - - 0.883 0.942 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
53. syngr3a ENSDARG00000014871 405 1.818 - - - - - 0.940 0.878 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
54. rbfox3 rbfox3 1443 1.806 - - - - - 0.943 0.863 - -
55. dpysl5b ENSDARG00000059311 600 1.8 - - - - - 0.951 0.849 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
56. bai3 bai3 92 1.798 - - - - - 0.956 0.842 - -
57. ppp2r2c ppp2r2c 441 1.797 - - - - - 0.942 0.855 - -
58. rab11bb ENSDARG00000090086 43 1.792 - 0.930 - - - 0.862 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
59. SPOCK1 ENSDARG00000074644 794 1.786 - - - - - 0.962 0.824 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
60. LRRC4C ENSDARG00000113411 36 1.786 - - - - - 0.869 0.917 - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
61. si:ch73-287n15.1 si:ch73-287n15.1 20 1.786 - - - - - 0.869 0.917 - -
62. FAM171A2 FAM171A2 707 1.783 0.889 - - - - - 0.894 - -
63. gng3 ENSDARG00000009553 2530 1.782 - - - - - 0.973 0.809 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
64. ANK1_1 ANK1_1 507 1.782 - - - - - 0.865 0.917 - -
65. sypb ENSDARG00000002230 262 1.781 - - - - - 0.916 0.865 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
66. NPTXR NPTXR 241 1.78 - - - - - 0.972 0.808 - -
67. rusc1 ENSDARG00000078125 617 1.779 - - - - - 0.921 0.858 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
68. scn8aa ENSDARG00000005775 792 1.777 - - - - - 0.858 0.919 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
69. FGFBP3 FGFBP3 993 1.777 - - - - - 0.896 0.881 - -
70. clstn3 ENSDARG00000073883 590 1.775 - - - - - 0.937 0.838 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
71. IGLON5 ENSDARG00000022176 1353 1.775 - - - - - 0.883 0.892 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
72. syt4 ENSDARG00000036505 421 1.77 - - - - - 0.919 0.851 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
73. CBFA2T3 ENSDARG00000079012 6799 1.766 - - - - - 0.887 0.879 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
74. slc12a5b ENSDARG00000078187 329 1.765 - - - - - 0.985 0.780 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
75. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 1.764 - - - - - 0.930 0.834 - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
76. scn2b ENSDARG00000101713 796 1.759 - - - - - 0.985 0.774 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
77. bhlhe22 ENSDARG00000058039 1673 1.757 - - - - - 0.950 0.807 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
78. clstn1 ENSDARG00000031720 5286 1.757 - - - - - 0.930 0.827 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
79. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.755 - - - - - 0.881 0.874 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
80. dbx2 2971 1.752 - - - - - 0.934 0.818 - - developing brain homeobox 2
81. gsx1 ENSDARG00000035735 1243 1.748 - - - - - 0.928 0.820 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
82. ntrk2a ENSDARG00000059897 185 1.747 - - - - - 0.921 0.826 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
83. map1aa ENSDARG00000059601 599 1.745 - - - - - 0.977 0.768 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
84. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.741 - - - - - 0.955 0.786 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
85. cspg5a ENSDARG00000069981 1699 1.74 - - - - - 0.953 0.787 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
86. mb21d2a mb21d2a 421 1.739 - - - - - 0.850 0.889 - -
87. nlgn3b ENSDARG00000062376 171 1.738 - - - - - 0.893 0.845 - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
88. RBPMS ENSDARG00000099396 61 1.737 0.889 - - - - - 0.848 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
89. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.735 - - - - - 0.895 0.840 - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
90. zgc:153615 ENSDARG00000038981 105 1.733 - - - - - 0.838 0.895 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
91. rab39b rab39b 449 1.731 - - - - - 0.981 0.750 - -
92. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.731 - - - - - 0.907 0.824 - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
93. GRM8_1 GRM8_1 85 1.731 - - - - - 0.914 0.817 - -
94. TRIM67 ENSDARG00000108787 290 1.73 - - - - - 0.901 0.829 - - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
95. dpysl3 ENSDARG00000002587 4381 1.73 - - - - - 0.895 0.835 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
96. kcnd1 ENSDARG00000074746 153 1.729 - - - - - 0.926 0.803 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
97. GJD2 GJD2 1351 1.729 0.842 - - - - - 0.887 - -
98. elavl3 ENSDARG00000014420 8644 1.729 - - - - - 0.909 0.820 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
99. SKOR2 SKOR2 1041 1.729 - - - - - 0.883 0.846 - -
100. pax6a ENSDARG00000103379 3061 1.728 - - - - - 0.884 0.844 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]

There are 2012 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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