Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab23

Gene Name Gene ID Reads Annotation
rab23 ENSDARG00000004151 1077 RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]










Genes with expression patterns similar to rab23

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab23 ENSDARG00000004151 1077 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
2. phf10 ENSDARG00000070084 1210 2.506 - - - 0.812 - 0.715 - 0.979 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
3. fzd7b ENSDARG00000027589 2562 2.504 - 0.864 - - - 0.757 - 0.883 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
4. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.439 - 0.799 - 0.810 - 0.830 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
5. unc119b ENSDARG00000044362 1528 2.429 - - - 0.755 - 0.736 - 0.938 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
6. C1H10orf12 C1H10orf12 1663 2.367 - 0.790 - 0.823 - 0.754 - - -
7. cnot11 ENSDARG00000068596 829 2.358 - - - 0.816 - 0.758 0.784 - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
8. cbll1 ENSDARG00000015222 995 1.893 - 0.907 - - - - - 0.986 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
9. elmod2 ENSDARG00000101669 3101 1.868 - - - - - 0.926 - 0.942 - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
10. sp1 ENSDARG00000088347 1697 1.832 - - - - - 0.859 - 0.973 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
11. smcr8a ENSDARG00000052818 559 1.829 - - - - - 0.846 - 0.983 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
12. hmbsb ENSDARG00000055991 3037 1.817 - 0.857 - - - - - 0.960 - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
13. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.793 - - - - - 0.877 - 0.916 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
14. sppl2 ENSDARG00000030448 1040 1.793 - - - - - 0.891 - 0.902 - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
15. prpf31 ENSDARG00000095904 526 1.764 - - - - - 0.782 - 0.982 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
16. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.763 - - - 0.801 - - - 0.962 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
17. atcaya ENSDARG00000071678 344 1.757 - - - - - 0.775 - 0.982 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
18. rdh14b ENSDARG00000002467 991 1.753 - - - 0.775 - - - 0.978 - retinol dehydrogenase 14b [Source:ZFIN;Acc:ZDB-GENE-030131-6605]
19. plat ENSDARG00000062707 491 1.75 - - - - - 0.760 - 0.990 - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
20. gpd1l ENSDARG00000040024 2182 1.747 - 0.793 - - - - - 0.954 - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
21. mast4 1164 1.746 - 0.778 - - - - - 0.968 - microtubule associated serine/threonine kinase family member 4, transcript variant X6
22. asnsd1 830 1.745 - - - - - 0.763 - 0.982 - asparagine synthetase domain containing 1, transcript variant X1
23. snai1a ENSDARG00000056995 1427 1.736 - - - 0.763 - - - 0.973 - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
24. ek1 ENSDARG00000020080 742 1.735 - - - - - 0.753 - 0.982 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
25. nexmifb ENSDARG00000029296 416 1.733 - - - - - 0.776 - 0.957 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
26. ptpn21 ENSDARG00000062248 2010 1.723 - 0.757 - - - - - 0.966 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
27. itga11a ENSDARG00000036086, ENSDARG00000111495 254 1.721 - - - - - 0.738 - 0.983 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
28. CYTH2 ENSDARG00000028800 2349 1.719 - - - - - 0.790 - 0.929 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
29. si:dkey-180p18.9 381 1.718 - - - - - 0.771 - 0.947 - si:dkey-180p18.9
30. CABZ01072954.1 CABZ01072954.1 2330 1.716 - - - - - 0.754 - 0.962 -
31. RNF5 ENSDARG00000075606 1730 1.712 - - - - - 0.739 - 0.973 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
32. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.706 - - - - - - 0.722 0.984 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
33. tceb1a 969 1.701 - 0.717 - - - - - 0.984 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
34. ptrhd1 ENSDARG00000016122 2705 1.699 - 0.729 - - - - - 0.970 - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
35. RBM26 ENSDARG00000104130 1012 1.697 - 0.839 - 0.858 - - - - - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
36. CASKIN2_1 CASKIN2_1 2299 1.69 - 0.707 - - - - - 0.983 -
37. aurka ENSDARG00000012485 3304 1.689 - - - 0.714 - - - 0.975 - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
38. tbl3 ENSDARG00000052344 1530 1.689 - 0.709 - - - - - 0.980 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
39. ppig ENSDARG00000044431 3427 1.681 - - - 0.814 - - - 0.867 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
40. mrpl11 ENSDARG00000013075 2927 1.676 - - - - - - 0.703 0.973 - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
41. tmem30ab ENSDARG00000043555 1344 1.664 - - - 0.740 - - - 0.924 - transmembrane protein 30Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5884]
42. lrig1 ENSDARG00000075625 2027 1.653 - - - 0.791 - - - 0.862 - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
43. map4k5 ENSDARG00000039125 1595 1.652 - - - - - - 0.759 0.893 - mitogen-activated protein kinase kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6497]
44. PHB2 PHB2 3755 1.649 - 0.821 - - - - - 0.828 -
45. ednraa ENSDARG00000011876, ENSDARG00000114764 1573 1.643 - 0.709 - - - - - 0.934 - endothelin receptor type Aa [Source:ZFIN;Acc:ZDB-GENE-010906-2]
46. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 1.642 - - - - - 0.723 - 0.919 - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
47. prkcbp1l ENSDARG00000011932 2714 1.641 - - - 0.763 - 0.878 - - - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
48. vrk1 ENSDARG00000018006 1759 1.641 - - - 0.737 - - - 0.904 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
49. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.637 - - - - - 0.774 - 0.863 - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
50. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.632 - - - - - - 0.750 0.882 - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
51. cadm1a ENSDARG00000031075 2484 1.632 - - - 0.724 - - - 0.908 - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
52. uros ENSDARG00000027491 1147 1.632 - 0.872 - - - 0.760 - - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
53. ap2b1 ENSDARG00000035152 2912 1.63 - - - - - 0.786 - 0.844 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
54. gabpb2a ENSDARG00000007943 1570 1.629 - - - - - 0.770 - 0.859 - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
55. tmem127 ENSDARG00000030981 1389 1.622 - - - - - 0.703 - 0.919 - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
56. xylt1 ENSDARG00000061248 2357 1.62 - - - - - 0.706 - 0.914 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
57. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.618 - - - 0.875 - 0.743 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
58. CDKN1C CDKN1C 667 1.616 - - - 0.828 - 0.788 - - -
59. CLIP3 ENSDARG00000054456 734 1.611 - - - 0.817 - 0.794 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
60. gipc1 ENSDARG00000104483 2913 1.611 - 0.875 - 0.736 - - - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
61. hoxb7a ENSDARG00000056030 1212 1.596 - 0.774 - - - 0.822 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
62. gpm6bb ENSDARG00000001676 2005 1.593 - - - 0.752 - - - 0.841 - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
63. gng2_1 ENSDARG00000056831 113 1.592 - - - 0.805 - 0.787 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
64. palm1b ENSDARG00000007818 2128 1.591 - - - - - 0.815 - 0.776 - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
65. si:dkey-100n10.2 101 1.59 - - - 0.809 - 0.781 - - - si:dkey-100n10.2
66. seta ENSDARG00000031495 39977 1.587 - - - - - 0.799 - 0.788 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
67. atp6ap1a ENSDARG00000041417 898 1.585 - - - 0.787 - 0.798 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
68. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.583 - 0.748 - 0.835 - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
69. golga7 ENSDARG00000057676 4691 1.582 - - - 0.744 - - - 0.838 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
70. CABZ01051991.1 CABZ01051991.1 346 1.576 - - - 0.825 - 0.751 - - -
71. dnajc5ab ENSDARG00000004836 2923 1.572 - 0.738 - 0.834 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
72. TRIM14_6 TRIM14_6 342 1.572 0.775 0.797 - - - - - - -
73. ttc14 ENSDARG00000013845 1192 1.568 - 0.749 - 0.819 - - - - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
74. AL954696.1 ENSDARG00000078442 768 1.563 - 0.779 - 0.784 - - - - - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
75. LDLRAD4 LDLRAD4 1237 1.561 - - - 0.749 - 0.812 - - -
76. cct8 ENSDARG00000008243 6843 1.561 - 0.784 - - - - - 0.777 - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
77. tenm3 ENSDARG00000005479 3799 1.557 - 0.752 - - - 0.805 - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
78. timmdc1 ENSDARG00000053466 2179 1.557 - - - - - 0.769 0.788 - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
79. pcyt1aa ENSDARG00000011233 1985 1.554 - 0.839 - - - 0.715 - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
80. sh3kbp1 ENSDARG00000075853 2838 1.55 - 0.761 - 0.789 - - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
81. TMEM185A TMEM185A 5505 1.547 - - - 0.737 - 0.810 - - -
82. mier2 ENSDARG00000071413 789 1.547 - 0.830 - - - 0.717 - - - mesoderm induction early response 1, family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-795]
83. dnaja1l dnaja1l 1536 1.544 - 0.753 - - - 0.791 - - -
84. cmtm6 ENSDARG00000099631 641 1.544 - - - 0.804 - 0.740 - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
85. PSMG4 1007 1.541 - 0.812 - 0.729 - - - - - proteasome (prosome, macropain) assembly chaperone 4
86. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.54 - - - - 0.775 0.765 - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
87. uvrag ENSDARG00000023815 424 1.539 - - - 0.791 - 0.748 - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
88. CR388231.3 ENSDARG00000105601 2404 1.537 - 0.750 - - - 0.787 - - -
89. st18 663 1.537 - - - 0.814 - 0.723 - - - suppression of tumorigenicity 18, zinc finger
90. BX511086.1 BX511086.1 8308 1.527 - 0.792 - - - - - 0.735 -
91. galnt2 ENSDARG00000003829 891 1.524 - - - 0.784 - 0.740 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
92. lrrfip2 ENSDARG00000010400 2633 1.52 - - - 0.803 - 0.717 - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
93. CABZ01080568.2 CABZ01080568.2 2137 1.518 - 0.758 - 0.760 - - - - -
94. ZCCHC2 ENSDARG00000067950 204 1.517 - - - 0.815 - 0.702 - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
95. C19H7orf41 C19H7orf41 2243 1.516 - - - 0.729 - 0.787 - - -
96. nat15 ENSDARG00000061185 396 1.513 - - - 0.808 - 0.705 - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
97. cwc22 ENSDARG00000014008 2385 1.512 - 0.759 - - - - 0.753 - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
98. flrt3 ENSDARG00000076895 3516 1.512 - 0.705 - - - 0.807 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
99. gak ENSDARG00000090654 695 1.506 - - - 0.723 - 0.783 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
100. eif4a2 ENSDARG00000016477 665 1.505 - 0.779 - 0.726 - - - - - eukaryotic translation initiation factor 4A, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2802]

There are 2051 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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