Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab1bb

Gene Name Gene ID Reads Annotation
rab1bb ENSDARG00000056479, ENSDARG00000109723 551 RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]










Genes with expression patterns similar to rab1bb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
2. leng1 ENSDARG00000037633 351 2.411 - - - - 0.732 - 0.744 0.935 - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
3. PRC1 PRC1 583 2.394 - - - - - 0.722 0.774 0.898 -
4. usp8 ENSDARG00000063719 643 1.729 - 0.851 - - - - - 0.878 - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
5. als2b ENSDARG00000076924 738 1.702 - 0.882 - - - - - 0.820 - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
6. nxph2a ENSDARG00000063224 75 1.702 0.824 - - - - - 0.878 - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
7. ubr1 ENSDARG00000060480 71 1.676 - 0.783 - - - - - 0.893 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
8. chm ENSDARG00000003845 498 1.67 - - - - - 0.807 - 0.863 - choroideremia (Rab escort protein 1) [Source:ZFIN;Acc:ZDB-GENE-030318-2]
9. scrn2 ENSDARG00000043497 204 1.652 - 0.804 - - - - 0.848 - - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
10. gpc1a ENSDARG00000019341, ENSDARG00000110513 935 1.639 0.848 0.791 - - - - - - - glypican 1a [Source:ZFIN;Acc:ZDB-GENE-051120-147]
11. prkab1a ENSDARG00000044183 264 1.632 - - - - - - 0.777 0.855 - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
12. tmem206 ENSDARG00000012271 508 1.628 - 0.837 - - - - - 0.791 - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
13. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 1.624 - 0.774 - - - - - 0.850 - Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
14. SLC5A6 SLC5A6 179 1.608 0.814 0.794 - - - - - - -
15. cep135 ENSDARG00000002991 164 1.606 - 0.764 - - - - 0.842 - - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
16. rfwd2 740 1.598 - - - - - - 0.703 0.895 - ring finger and WD repeat domain 2, transcript variant X1
17. dck ENSDARG00000044807 510 1.569 0.732 - - - - - - 0.837 - deoxycytidine kinase [Source:ZFIN;Acc:ZDB-GENE-041024-3]
18. grin2da ENSDARG00000086207 28 1.567 0.783 0.784 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
19. B3GNT1 B3GNT1 601 1.559 - - - - - 0.761 0.798 - -
20. rn7sk ENSDARG00000081270 149 1.548 - 0.787 - - - - 0.761 - - RNA, 7SK small nuclear [Source:ZFIN;Acc:ZDB-GENE-090323-1]
21. smim15 ENSDARG00000086699, ENSDARG00000114331 1945 1.545 - 0.747 - - - - - 0.798 - small integral membrane protein 15 [Source:ZFIN;Acc:ZDB-GENE-070410-48]
22. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.525 0.724 - - - - - - 0.801 - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
23. fam49bb ENSDARG00000045417 513 1.522 - 0.769 - - - - - 0.753 - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
24. sertad2a ENSDARG00000093412 503 1.517 - - - - - 0.787 0.730 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
25. iars2 ENSDARG00000044134 1990 1.513 0.785 - - - - - 0.728 - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
26. gadd45bb ENSDARG00000013576 331 1.51 0.722 - - - - - 0.788 - - growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
27. TRIM35_4 TRIM35_4 63 1.509 0.735 0.774 - - - - - - -
28. ppp1r26 ENSDARG00000102891 486 1.501 - 0.754 - - - 0.747 - - - protein phosphatase 1, regulatory subunit 26 [Source:ZFIN;Acc:ZDB-GENE-061103-607]
29. EOGT ENSDARG00000022853 366 1.494 0.735 - - - - 0.759 - - - EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [Source:ZFIN;Acc:ZDB-GENE-120813-8]
30. bcl9l ENSDARG00000055054 128 1.487 - 0.750 - - - - 0.737 - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
31. clgn ENSDARG00000009315 993 1.479 - - - - - - 0.713 0.766 - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
32. rbbp8 ENSDARG00000043480 585 1.478 - 0.717 - - - - 0.761 - - retinoblastoma binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-050220-14]
33. RNASEH2C ENSDARG00000089637 1673 1.47 - - - - - - 0.725 0.745 - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
34. fam5ca fam5ca 76 1.447 - - - - 0.732 - 0.715 - -
35. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.431 - - - - - 0.726 - 0.705 - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
36. nmt2 ENSDARG00000021808 510 0.939 - - - - - - - 0.939 - N-myristoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-717]
37. CABZ01102039.1 ENSDARG00000076357 273 0.934 - 0.934 - - - - - - -
38. tfip11 ENSDARG00000056932 479 0.932 - - - - - - - 0.932 - tuftelin interacting protein 11 [Source:ZFIN;Acc:ZDB-GENE-040718-479]
39. nphp4 ENSDARG00000069014 77 0.922 - - - - - - - 0.922 - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
40. DSCAML1 ENSDARG00000098057 321 0.922 0.922 - - - - - - - - Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
41. ZNF362 ZNF362 638 0.922 - - - - - - - 0.922 -
42. rxrgb ENSDARG00000004697 332 0.919 - - - - - - - 0.919 - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
43. ASPH ENSDARG00000055945 214 0.917 - - - - - - - 0.917 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
44. atrip ENSDARG00000063076 385 0.917 - - - - - - - 0.917 - ATR interacting protein [Source:ZFIN;Acc:ZDB-GENE-050208-331]
45. cul1b ENSDARG00000007691 719 0.916 - - - - - - - 0.916 - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
46. zc3h10 ENSDARG00000030335 236 0.915 - - - - - - - 0.915 - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
47. zgc:109744 ENSDARG00000070800 262 0.914 - - - - - - - 0.914 - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
48. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.911 - - - - - - - 0.911 - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
49. chkb ENSDARG00000063167 440 0.911 - - - - - - - 0.911 - choline kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
50. GPR137B GPR137B 50 0.911 - - - - - - - 0.911 -
51. ercc2 ENSDARG00000021985 678 0.91 - - - - - - - 0.910 - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
52. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.91 - - - - - - - 0.910 - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
53. sgta ENSDARG00000019941 238 0.909 - - - - - - - 0.909 - small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-8811]
54. ZBTB8A ENSDARG00000059226 98 0.909 - - - - - - - 0.909 - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
55. PHC3 ENSDARG00000074604 239 0.908 - - - - - - - 0.908 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
56. trmt5 ENSDARG00000069278 228 0.908 - - - - - - - 0.908 - TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5978]
57. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 0.908 - - - - - - - 0.908 - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
58. kcnc1a ENSDARG00000051852 317 0.907 - - - - - - - 0.907 - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
59. CABZ01078431.1 CABZ01078431.1 183 0.907 - - - - - - - 0.907 -
60. slc2a15b ENSDARG00000053269 899 0.904 - - - - - - - 0.904 - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
61. CT573468.1 CT573468.1 283 0.904 - - - - - - - 0.904 -
62. mbip ENSDARG00000019364 238 0.903 - 0.903 - - - - - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
63. pdk1 ENSDARG00000013128 526 0.902 - - - - - - - 0.902 - pyruvate dehydrogenase kinase, isozyme 1 [Source:ZFIN;Acc:ZDB-GENE-091204-402]
64. BX511006.2 BX511006.2 29 0.902 - - - - - - - 0.902 -
65. GABRR1 ENSDARG00000043902 71 0.902 - - - - - - - 0.902 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
66. ba1 69 0.902 - - - - - - - 0.902 - ba1 globin
67. KIF21B ENSDARG00000009733 53 0.901 - - - - - - - 0.901 - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
68. si:ch1073-174d20.2 ENSDARG00000079651 171 0.901 - - - - - - - 0.901 - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
69. zgc:171459 ENSDARG00000077248 224 0.901 - - - - - - - 0.901 - zgc:171459 [Source:ZFIN;Acc:ZDB-GENE-030131-2059]
70. bcl3 ENSDARG00000087832 69 0.901 - - - - - - - 0.901 - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
71. spop ENSDARG00000100519 177 0.901 - - - - - - - 0.901 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
72. si:dkey-238g7.2 si:dkey-238g7.2 181 0.901 - - - - - - - 0.901 -
73. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.901 - - - - - - - 0.901 - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
74. RHBDF1 RHBDF1 131 0.9 - - - - - - - 0.900 -
75. acvrl1 ENSDARG00000018179 308 0.897 - 0.897 - - - - - - - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
76. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 0.897 - - - - - - - 0.897 - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
77. ANKLE1 ANKLE1 346 0.896 - - - - - - - 0.896 -
78. ncaldb ENSDARG00000011334 123 0.896 - 0.896 - - - - - - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
79. lrriq1 ENSDARG00000093781 83 0.895 - - - - - - - 0.895 - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
80. slc5a3a ENSDARG00000010376 134 0.895 - - - - - - - 0.895 - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
81. mier1b ENSDARG00000001447 1680 0.895 - - - - - - - 0.895 - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
82. si:dkey-42p8.3 1117 0.894 - - - - - - - 0.894 - si:dkey-42p8.3, transcript variant X1
83. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.894 - - - - - - - 0.894 - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
84. srd5a2a ENSDARG00000043587 21 0.894 - - - - - - - 0.894 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
85. tmprss13b ENSDARG00000077573 47 0.893 - - - - - - - 0.893 - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
86. tmem180 tmem180 430 0.893 - - - - - - - 0.893 -
87. C3H16orf58 C3H16orf58 487 0.893 - - - - - - - 0.893 -
88. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.892 - - - - - - - 0.892 - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
89. echdc2 ENSDARG00000016607 719 0.892 - - - - - - - 0.892 - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
90. si:ch211-282k23.2 ENSDARG00000093591 447 0.892 - - - - - - - 0.892 - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
91. si:dkey-96h14.3 si:dkey-96h14.3 355 0.892 0.892 - - - - - - - -
92. si:dkey-152b24.6 ENSDARG00000105043 39 0.892 - - - - - - - 0.892 - si:dkey-152b24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-31]
93. fam177a1 ENSDARG00000079636 2391 0.892 - - - - - - - 0.892 - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
94. nlgn1 ENSDARG00000077710 72 0.891 - - - - - - - 0.891 - neuroligin 1 [Source:ZFIN;Acc:ZDB-GENE-090918-1]
95. ovol1 1037 0.89 - - - - - - - 0.890 - ovo-like zinc finger 1, transcript variant X1
96. GFRAL ENSDARG00000089709 167 0.89 - - - - - - - 0.890 - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
97. psmd2 ENSDARG00000103190 141 0.889 - - - - - - - 0.889 - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
98. CU469544.1 CU469544.1 219 0.889 - - - - - - - 0.889 -
99. adnpb ENSDARG00000074293 796 0.889 - - - - - - - 0.889 - activity-dependent neuroprotector homeobox b [Source:ZFIN;Acc:ZDB-GENE-030131-6385]
100. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 0.889 - - - - - - - 0.889 - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]

There are 1139 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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