Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab1ba

Gene Name Gene ID Reads Annotation
rab1ba ENSDARG00000058044 5080 zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]










Genes with expression patterns similar to rab1ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab1ba ENSDARG00000058044 5080 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
2. hyou1 ENSDARG00000013670 4172 2.481 - 0.784 0.843 - - - - 0.854 - hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
3. mapk3 ENSDARG00000070573 6842 2.399 - 0.713 - - 0.712 0.974 - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
4. ZNF618 ENSDARG00000071469 2347 2.35 - 0.723 0.886 - - - - - 0.741 zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
5. parp1 ENSDARG00000019529 6787 1.985 - - - - - 0.987 0.998 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
6. CABZ01088039.1 CABZ01088039.1 2482 1.931 - - 0.943 - - 0.988 - - -
7. tmem134 ENSDARG00000024828 3241 1.895 - 0.907 - - - 0.988 - - - transmembrane protein 134 [Source:ZFIN;Acc:ZDB-GENE-040426-1345]
8. canx ENSDARG00000037488 4328 1.868 - - 0.878 - - 0.990 - - - calnexin [Source:ZFIN;Acc:ZDB-GENE-040426-2797]
9. cmip ENSDARG00000062933 4521 1.867 - - 0.869 - - - 0.998 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
10. mcts1 ENSDARG00000025972 4662 1.85 - - 0.862 - - 0.988 - - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
11. ube2v1 ENSDARG00000041875 5739 1.841 - - 0.851 - - 0.990 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
12. pbxip1b ENSDARG00000011824 3726 1.83 - - 0.841 - - 0.989 - - - pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
13. rab5aa ENSDARG00000018602 8947 1.813 - - 0.815 - - - 0.998 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
14. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.778 - - 0.837 - - 0.941 - - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
15. qkia ENSDARG00000097478 18572 1.769 - - - 0.776 - - 0.993 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
16. jak1 ENSDARG00000020625, ENSDARG00000117102 5057 1.768 - - - - - 0.969 - - 0.799 Janus kinase 1 [Source:ZFIN;Acc:ZDB-GENE-980526-142]
17. rabgef1 ENSDARG00000014430 1176 1.743 - - - - 0.756 0.987 - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
18. sf3b4 ENSDARG00000018574 7470 1.724 - 0.731 - - - 0.993 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
19. pcl pcl 2862 1.713 - 0.745 - - - 0.968 - - -
20. IKZF2 ENSDARG00000069111 1366 1.711 - - - - 0.752 0.959 - - - IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
21. C9H2orf76 C9H2orf76 559 1.703 - - - - - 0.987 - 0.716 -
22. tfg ENSDARG00000003641, ENSDARG00000115188 3834 1.699 0.710 - - - - 0.989 - - - trk-fused gene [Source:ZFIN;Acc:ZDB-GENE-030131-8410]
23. evpla ENSDARG00000019808 7565 1.692 - - - - - 0.949 - - 0.743 envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
24. parvaa ENSDARG00000043710 3495 1.689 - - - - 0.701 0.988 - - - parvin, alpha a [Source:ZFIN;Acc:ZDB-GENE-040721-2]
25. psmb7 ENSDARG00000037962 11542 1.681 - 0.801 0.880 - - - - - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
26. pdia3 ENSDARG00000102640 7239 1.659 - 0.798 - - - - - 0.861 - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
27. NAIF1_1 NAIF1_1 1336 1.653 - 0.743 0.910 - - - - - -
28. tmem248 ENSDARG00000018825 1560 1.639 - 0.731 0.908 - - - - - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
29. minos1 ENSDARG00000101619 5273 1.638 - 0.731 0.907 - - - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
30. padi2 ENSDARG00000044167 6765 1.63 - - - - 0.720 0.910 - - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
31. smg5 ENSDARG00000041481 1286 1.624 - - 0.904 - 0.720 - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
32. eif3ja ENSDARG00000012603 6324 1.592 - - 0.876 - 0.716 - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
33. xrcc5_1 ENSDARG00000099298 1533 1.592 - - 0.885 - - - - - 0.707 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
34. pleca ENSDARG00000062590 16794 1.591 0.741 - - - - 0.850 - - - plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
35. abi3bp 2170 1.586 - 0.705 - - - 0.881 - - - ABI family member 3 binding protein, transcript variant X3
36. ptbp1a ENSDARG00000019362 6290 1.584 - - 0.831 - - - - - 0.753 polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
37. adam10a ENSDARG00000053468 9308 1.56 - 0.711 0.849 - - - - - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
38. ptplb ptplb 6135 1.539 0.727 - 0.812 - - - - - -
39. wasf2 ENSDARG00000024209 5338 1.521 - 0.789 - - - - - - 0.732 WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
40. tpx2 ENSDARG00000078654 8120 1.501 - 0.790 0.711 - - - - - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
41. cwf19l2 ENSDARG00000091760 1372 1.497 - 0.749 - - 0.748 - - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
42. pfdn6 ENSDARG00000037108 2083 1.486 - 0.767 - - 0.719 - - - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
43. sb:cb252 sb:cb252 2480 1.472 - - 0.757 - - - - 0.715 -
44. mpdu1b ENSDARG00000040265 1968 1.462 - - - - 0.719 - - 0.743 - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
45. gsnb ENSDARG00000045262 4382 1.419 0.711 - - - 0.708 - - - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
46. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.408 0.705 - - - 0.703 - - - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
47. FP102272.1 FP102272.1 9473 0.999 - - - - - - 0.999 - -
48. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.999 - - - - - - 0.999 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
49. chd2 ENSDARG00000060687 3832 0.999 - - - - - - 0.999 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
50. vamp3 ENSDARG00000070161 6396 0.999 - - - - - - 0.999 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
51. stx12 ENSDARG00000098813 2576 0.999 - - - - - - 0.999 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
52. serpine2 ENSDARG00000029353 2274 0.999 - - - - - - 0.999 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
53. sh3gl3a ENSDARG00000013360 3602 0.999 - - - - - - 0.999 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
54. slc16a12b ENSDARG00000089885 3744 0.999 - - - - - - 0.999 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
55. loxl2a ENSDARG00000044010 1906 0.998 - - - - - - 0.998 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
56. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 0.998 - - - - - - 0.998 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
57. PCDH9 ENSDARG00000063264 1309 0.998 - - - - - - 0.998 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
58. ndufa7 ENSDARG00000036684 6051 0.998 - - - - - - 0.998 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
59. efcab7 ENSDARG00000020279 1030 0.998 - - - - - - 0.998 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
60. bin2a ENSDARG00000003219 1369 0.998 - - - - - - 0.998 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
61. loxl1 ENSDARG00000054451 2485 0.998 - - - - - - 0.998 - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
62. cep97 ENSDARG00000102407 1154 0.998 - - - - - - 0.998 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
63. EIF4G1_1 EIF4G1_1 3721 0.998 - - - - - - 0.998 - -
64. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 0.998 - - - - - - 0.998 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
65. phf2 ENSDARG00000018691 3341 0.998 - - - - - - 0.998 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
66. TUBGCP6 1991 0.998 - - - - - - 0.998 - - tubulin, gamma complex associated protein 6
67. rgma ENSDARG00000012248 2238 0.998 - - - - - - 0.998 - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
68. CT955967.1 ENSDARG00000099956 2885 0.998 - - - - - - 0.998 - -
69. BX548078.1 ENSDARG00000093780 1325 0.998 - - - - - - 0.998 - -
70. wu:fj08f03 wu:fj08f03 1337 0.998 - - - - - - 0.998 - -
71. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.998 - - - - - - 0.998 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
72. AL772300.3 AL772300.3 1752 0.998 - - - - - - 0.998 - -
73. aspg ENSDARG00000052942 1406 0.998 - - - - - - 0.998 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
74. cth ENSDARG00000074301 3860 0.998 - - - - - - 0.998 - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
75. rbm39a ENSDARG00000011613 4520 0.998 - - - - - - 0.998 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
76. lgals3l lgals3l 3833 0.997 - - - - - - 0.997 - -
77. eif3c ENSDARG00000016443 18003 0.997 - - - - - - 0.997 - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
78. hoxb8a ENSDARG00000056027 6340 0.997 - - - - - - 0.997 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
79. mat2aa ENSDARG00000040334 10769 0.997 - - - - - - 0.997 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
80. rnaseka ENSDARG00000069461 10304 0.997 - - - - - - 0.997 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
81. zgc:101000 zgc:101000 9041 0.997 - - - - - - 0.997 - -
82. lamc1 ENSDARG00000036279 11025 0.996 - - - - - - 0.996 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
83. psmd6 ENSDARG00000070674 4675 0.996 - - - - - - 0.996 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
84. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.996 - - - - - - 0.996 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
85. CU463857.1 CU463857.1 5541 0.995 - - - - - - 0.995 - -
86. oaz1a ENSDARG00000071403 21112 0.995 - - - - - - 0.995 - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
87. snd1 ENSDARG00000006766 12906 0.995 - - - - - - 0.995 - - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
88. cx43.4 ENSDARG00000007099 16369 0.995 - - - - - - 0.995 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
89. ctsf ENSDARG00000063095 4564 0.995 - - - - - 0.995 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
90. mpi ENSDARG00000030786 3052 0.994 - - - - - 0.994 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
91. si:dkey-29j8.3 1288 0.993 - - - - - 0.993 - - - si:dkey-29j8.3, transcript variant X2
92. rbx1 ENSDARG00000038030 14611 0.993 - - - - - - 0.993 - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
93. CREM CREM 1333 0.992 - - - - - 0.992 - - -
94. ptp4a2 ptp4a2 3196 0.992 - - - - - 0.992 - - -
95. nr2f1a ENSDARG00000052695 5037 0.992 - - - - - - 0.992 - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
96. hmgcl ENSDARG00000021220 2468 0.992 - - - - - - 0.992 - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
97. si:ch211-160e1.5 5586 0.992 - - - - - 0.992 - - - si:ch211-160e1.5
98. olfml2a ENSDARG00000005648 1157 0.991 - - - - - 0.991 - - - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
99. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 0.991 - - - - - 0.991 - - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
100. cxxc5a ENSDARG00000078865 3447 0.991 - - - - - 0.991 - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]

There are 915 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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