Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab18a

Gene Name Gene ID Reads Annotation
rab18a ENSDARG00000055291, ENSDARG00000111917 2088 RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]










Genes with expression patterns similar to rab18a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
2. rgs12b ENSDARG00000036774 5088 2.632 - - - - - 0.734 - 0.959 0.939 regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
3. gigfy2 3194 2.632 0.701 - 0.958 - - - - 0.973 - GRB10 interacting GYF protein 2, transcript variant X1
4. stm ENSDARG00000035694 1567 2.603 0.927 0.707 0.969 - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
5. bcat2 ENSDARG00000054849 4317 2.504 0.779 - 0.949 - - - 0.776 - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
6. slc39a7 ENSDARG00000104451 6368 2.447 0.769 - - - - - - 0.883 0.795 solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
7. zgc:92380 ENSDARG00000041339 1867 2.427 - 0.700 - - - 0.788 - 0.939 - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
8. vps29 ENSDARG00000069521 5599 2.425 0.740 - - - - - 0.729 - 0.956 vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
9. zgc:85975 4738 2.41 0.735 - - - - 0.716 - - 0.959 zgc:85975
10. gna11a ENSDARG00000010002, ENSDARG00000111208 1303 2.355 0.876 - - - - 0.701 0.778 - - guanine nucleotide binding protein (G protein), alpha 11a (Gq class) [Source:ZFIN;Acc:ZDB-GENE-050208-597]
11. sepw2b 3942 2.348 0.747 - - - - - - 0.716 0.885 selenoprotein W, 2b
12. rnps1 ENSDARG00000116743 9994 2.297 - - - - - - 0.764 0.778 0.755 RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
13. copz1 ENSDARG00000017844 7277 2.276 0.799 - - - - 0.745 0.732 - - coatomer protein complex, subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-000406-6]
14. srebf2 ENSDARG00000063438 1982 1.961 - - 0.985 - - - - 0.976 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
15. TUBGCP6 1991 1.955 - - 0.978 - - - - 0.977 - tubulin, gamma complex associated protein 6
16. C10H11orf30 C10H11orf30 1982 1.946 - - 0.979 - - - - - 0.967
17. arhgef25b ENSDARG00000014465 669 1.935 0.963 - - - - - - - 0.972 Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
18. galnt12 ENSDARG00000055490 1653 1.932 0.946 - - - - - - - 0.986 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
19. st6gal2 st6gal2 1570 1.932 - - - - - - - 0.963 0.969
20. arfrp1 ENSDARG00000057857 2840 1.926 0.954 - - - - - - - 0.972 ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
21. twf1a ENSDARG00000115712 3465 1.922 - - 0.959 - - - - - 0.963 twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
22. foxo1a ENSDARG00000099555 288 1.914 0.939 - - - - - - - 0.975 forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
23. arcn1a ENSDARG00000002792 2847 1.903 0.942 - - - - - - - 0.961 archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
24. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.889 0.911 - 0.978 - - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
25. wu:fb12e11 wu:fb12e11 2332 1.88 0.906 - 0.974 - - - - - -
26. fmnl2b ENSDARG00000075041 1744 1.869 0.898 - 0.971 - - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
27. dscr3 1229 1.868 0.892 - 0.976 - - - - - - Down syndrome critical region 3
28. dyrk1b ENSDARG00000070187 2777 1.854 0.887 - - - - - - 0.967 - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
29. s100z ENSDARG00000038729 442 1.853 0.875 - - - - - - - 0.978 S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
30. retsat ENSDARG00000018600 832 1.837 0.874 - - - - - - 0.963 - retinol saturase (all-trans-retinol 13,14-reductase) [Source:ZFIN;Acc:ZDB-GENE-050320-11]
31. thbs1b ENSDARG00000010785 3095 1.825 0.841 - 0.984 - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
32. CABZ01057013.1 CABZ01057013.1 1308 1.823 0.908 - - - - - - 0.915 -
33. reep5 ENSDARG00000100742 1470 1.817 - - 0.970 - - - 0.847 - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
34. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.814 0.837 - 0.977 - - - - - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
35. ip6k2 ip6k2 3926 1.811 - - 0.965 - - - - - 0.846
36. msi2b ENSDARG00000032614 3095 1.811 - - - - - - - 0.901 0.910 musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
37. rbm25 rbm25 3629 1.81 0.894 - 0.916 - - - - - -
38. eps8l1 1598 1.79 0.856 - - - - - - 0.934 - eps8-like1, transcript variant X3
39. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.785 - - 0.884 - - - - 0.901 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
40. psmd11b ENSDARG00000005134 4242 1.783 - - 0.879 - - - - - 0.904 proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
41. C6H2orf40 C6H2orf40 4224 1.779 - 0.817 0.962 - - - - - -
42. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 1.779 - - 0.891 - - - - - 0.888 coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
43. GTSE1 ENSDARG00000013719 1115 1.774 - - 0.978 0.796 - - - - - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
44. CABZ01087568.1 CABZ01087568.1 1487 1.772 - - 0.977 - - - 0.795 - -
45. cebpb ENSDARG00000042725 3921 1.77 - 0.816 - - - - - 0.954 - CCAAT enhancer binding protein beta [Source:ZFIN;Acc:ZDB-GENE-020111-3]
46. irf2a ENSDARG00000007387 915 1.767 - 0.787 0.980 - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
47. hgd ENSDARG00000058005 437 1.766 - - - - - - 0.784 - 0.982 homogentisate 1,2-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-020802-5]
48. SON SON 510 1.757 - 0.776 0.981 - - - - - -
49. ALDH1L2 ENSDARG00000070230 2550 1.757 - - - - - - - 0.802 0.955 aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
50. si:ch211-11k18.4 ENSDARG00000087869 3298 1.757 - - - - - - - 0.914 0.843 si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
51. sh3gl1a ENSDARG00000067958 1105 1.757 0.929 - - - - - - - 0.828 SH3-domain GRB2-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4524]
52. serpinb1l4 ENSDARG00000096888 10462 1.751 - - - - - - - 0.821 0.930 serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7169]
53. pi4k2a ENSDARG00000033666 1257 1.749 - - 0.977 - - 0.772 - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
54. zgc:100918 ENSDARG00000087243 5451 1.749 0.900 - 0.849 - - - - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
55. fbl ENSDARG00000053912 5891 1.745 0.800 - 0.945 - - - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
56. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 1.744 - 0.794 - - - - - 0.950 - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
57. samd10a ENSDARG00000079978, ENSDARG00000112138 430 1.742 - 0.787 - - - - - 0.955 - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
58. entpd2a.2 ENSDARG00000033953 389 1.738 0.932 0.806 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
59. dbf4 ENSDARG00000074796 489 1.734 - 0.747 0.987 - - - - - - DBF4 zinc finger [Source:ZFIN;Acc:ZDB-GENE-091020-13]
60. rapgef2 ENSDARG00000005482 2586 1.731 - - 0.984 - - - 0.747 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
61. elovl6 ENSDARG00000004402, ENSDARG00000114205 2286 1.73 - - - - - 0.757 - - 0.973 ELOVL fatty acid elongase 6 [Source:ZFIN;Acc:ZDB-GENE-030114-1]
62. klf5a 1072 1.725 - 0.745 0.980 - - - - - - Kruppel-like factor 5a
63. rnf10 ENSDARG00000079687 6768 1.724 - - 0.920 - - - - 0.804 - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
64. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 1.724 0.762 - - - - - - - 0.962 golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
65. araf ENSDARG00000054533 1132 1.723 - 0.750 - - - - - 0.973 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
66. DALRD3 ENSDARG00000068602 3062 1.72 - - 0.915 - - 0.805 - - - DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
67. si:ch211-226m16.2 ENSDARG00000036785 2163 1.719 - - 0.836 - - - - 0.883 - si:ch211-226m16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2302]
68. ddrgk1_1 ENSDARG00000037172 1563 1.719 0.944 0.775 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
69. serpinh1a ENSDARG00000075954 6488 1.717 - - - - - - 0.836 0.881 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
70. xpnpep1 ENSDARG00000029011 1723 1.713 0.761 - 0.952 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-999]
71. tmem51a ENSDARG00000068575, ENSDARG00000114656 596 1.708 - - - - - 0.725 - - 0.983 transmembrane protein 51a [Source:ZFIN;Acc:ZDB-GENE-061103-481]
72. si:dkey-66i24.9 ENSDARG00000096689 796 1.707 - 0.734 0.973 - - - - - - si:dkey-66i24.9 [Source:ZFIN;Acc:ZDB-GENE-130531-63]
73. rnaseka ENSDARG00000069461 10304 1.706 - 0.744 - - - - - 0.962 - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
74. hopx ENSDARG00000089368 2342 1.703 0.730 - 0.973 - - - - - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]
75. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 1.701 - - - - - - 0.724 0.977 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
76. anapc16 ENSDARG00000013822 5857 1.7 0.871 - - - - - - 0.829 - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
77. fat1 fat1 3934 1.695 - - 0.913 - - - - - 0.782
78. cks1b ENSDARG00000007971 2739 1.694 0.765 - 0.929 - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
79. adamts9 ENSDARG00000077778 419 1.692 - - - - - - 0.714 - 0.978 ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
80. wnk1b ENSDARG00000039392 3587 1.689 - - 0.970 - - 0.719 - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
81. exoc5 ENSDARG00000060323 2450 1.687 - - - - - - 0.726 - 0.961 exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
82. nr2f6b ENSDARG00000003165 5855 1.686 - - - - - 0.775 - 0.911 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
83. znf185 ENSDARG00000103917 7195 1.683 - - - - - - - 0.786 0.897 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
84. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.683 - - - 0.712 - - - 0.971 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
85. tnfaip3 ENSDARG00000027777 1066 1.681 - - 0.976 - - - 0.705 - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
86. gpx7 ENSDARG00000091511 3045 1.68 0.881 - - - - - - - 0.799 glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
87. sdpra sdpra 4594 1.674 - 0.779 - - - - - - 0.895
88. luc7l ENSDARG00000055903 3357 1.673 0.743 - 0.930 - - - - - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
89. zic2a ENSDARG00000015554 2860 1.672 - - 0.846 - - - - 0.826 - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
90. mdh1a mdh1a 11035 1.668 - - 0.934 - - - - 0.734 -
91. si:ch211-161h7.4 ENSDARG00000087238 4399 1.666 0.873 - 0.793 - - - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
92. rsrc2 ENSDARG00000042534 1756 1.666 0.953 - - - - 0.713 - - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
93. si:ch211-214e3.5 ENSDARG00000074270 755 1.665 0.914 0.751 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
94. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.659 - - - - - - - 0.816 0.843 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
95. amotl2b ENSDARG00000061948 974 1.656 0.945 - - - - 0.711 - - - angiomotin like 2b [Source:ZFIN;Acc:ZDB-GENE-061103-307]
96. atp6v1f ENSDARG00000045543 3445 1.655 - - - - - 0.708 - 0.947 - ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
97. atp2b4 5891 1.652 - - 0.867 - - - - - 0.785 ATPase, Ca++ transporting, plasma membrane 4
98. flot2a ENSDARG00000004830 5276 1.649 0.836 - - - - - - 0.813 - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
99. pkma ENSDARG00000099730 1314 1.648 - 0.728 - - - - - 0.920 - pyruvate kinase M1/2a [Source:ZFIN;Acc:ZDB-GENE-031201-4]
100. tfap2c ENSDARG00000040606 4628 1.644 - - - - - - - 0.900 0.744 transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]

There are 1762 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA