Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab11fip4a

Gene Name Gene ID Reads Annotation
rab11fip4a ENSDARG00000090170 839 RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]










Genes with expression patterns similar to rab11fip4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab11fip4a ENSDARG00000090170 839 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]
2. si:ch211-194k22.8 ENSDARG00000096711 1318 2.377 - 0.787 - - - - 0.887 - 0.703 si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
3. smarca5 ENSDARG00000052348 15433 2.331 - - - - - 0.735 0.847 - 0.749 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
4. ctnnd2b ENSDARG00000003779 964 2.205 - - 0.775 - - 0.704 - - 0.726 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
5. MAP4K4 ENSDARG00000098670 4665 2.157 - - 0.719 - - 0.716 - - 0.722 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
6. BX511121.1 ENSDARG00000029997 1774 2.144 0.723 0.704 - - - 0.717 - - -
7. TRAPPC10 ENSDARG00000098118 954 1.78 - 0.885 - - - - 0.895 - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
8. zgc:112083 ENSDARG00000037405 306 1.692 - 0.779 - - - - 0.913 - - zgc:112083 [Source:ZFIN;Acc:ZDB-GENE-050417-284]
9. syt2a ENSDARG00000025206 681 1.674 - - - - - 0.709 0.965 - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
10. sarnp ENSDARG00000059357 4768 1.655 - - - - - - 0.808 0.847 - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
11. ptprnb ENSDARG00000077047 2743 1.637 - - - - - 0.804 - 0.833 - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
12. TNRC6C_2 TNRC6C_2 2444 1.631 - - 0.712 - - 0.919 - - -
13. syt11b ENSDARG00000056105 578 1.627 - - - - - 0.746 0.881 - - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
14. mapk11 ENSDARG00000045836 846 1.624 - - - - - 0.716 - 0.908 - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
15. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.619 0.855 - - - - - - - 0.764 minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
16. tfdp2 ENSDARG00000042835 1985 1.617 - - - - - 0.826 - - 0.791 transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
17. zbtb18 ENSDARG00000028228 3653 1.601 - - - - - 0.802 - - 0.799 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
18. cldn19 ENSDARG00000044569 281 1.596 - 0.769 - - - 0.827 - - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
19. foxo3a ENSDARG00000023058 2554 1.595 - - - - - 0.874 0.721 - - forkhead box O3A [Source:ZFIN;Acc:ZDB-GENE-050116-1]
20. whsc1 1701 1.595 - - - - - - 0.882 0.713 - Wolf-Hirschhorn syndrome candidate 1
21. eno2 ENSDARG00000014287 2162 1.594 - 0.758 - - - 0.836 - - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
22. nasp ENSDARG00000039208, ENSDARG00000114134 873 1.587 - 0.780 - - - - 0.807 - - nuclear autoantigenic sperm protein (histone-binding) [Source:ZFIN;Acc:ZDB-GENE-030131-5511]
23. ralgps2 ENSDARG00000026519 1610 1.587 - 0.876 - - - - 0.711 - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
24. msi1 ENSDARG00000010710 2634 1.585 - - 0.738 - - 0.847 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
25. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.584 0.704 - - - - 0.880 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
26. cmtm7 ENSDARG00000010032 875 1.582 0.712 - - - - - - 0.870 - CKLF-like MARVEL transmembrane domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-041111-174]
27. rqcd1 2301 1.576 - - - - - 0.734 0.842 - - RCD1 required for cell differentiation1 homolog (S. pombe)
28. si:dkey-17e16.17 615 1.566 - 0.750 - - - - 0.816 - - si:dkey-17e16.17
29. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 1.563 - 0.770 - - - 0.793 - - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
30. eif4enif1 ENSDARG00000016177 238 1.561 0.733 - - - - - 0.828 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
31. mllt11 ENSDARG00000071026 2518 1.561 - 0.781 - - - 0.780 - - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
32. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.555 - 0.750 - - - - - 0.805 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
33. sh2d3ca ENSDARG00000028099 1037 1.555 - 0.718 - - - - 0.837 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
34. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.554 - - - - - 0.700 0.854 - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
35. chsy1 ENSDARG00000079027 455 1.552 - 0.747 - - - - 0.805 - - chondroitin sulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3127]
36. celf3a ENSDARG00000034668 2432 1.55 - - - - - 0.779 - - 0.771 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
37. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.546 - - - - - 0.836 - 0.710 - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
38. zcchc10 ENSDARG00000091092 1333 1.545 - - - - - 0.727 0.818 - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
39. cuedc1b ENSDARG00000054748 1638 1.542 - - - - - 0.835 0.707 - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
40. fez1 ENSDARG00000023174 701 1.537 - - - - - 0.822 - - 0.715 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
41. otx2 766 1.535 - - - - - - 0.790 - 0.745 orthodenticle homeobox 2, transcript variant X2
42. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.531 - - - - - 0.821 - - 0.710 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
43. si:dkey-51a16.9 ENSDARG00000039483 444 1.53 - 0.763 - - - 0.767 - - - si:dkey-51a16.9 [Source:ZFIN;Acc:ZDB-GENE-030616-560]
44. trrap ENSDARG00000100623 3429 1.529 - 0.714 - - - - 0.815 - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
45. CU638740.3 CU638740.3 164 1.517 - 0.724 - - - - 0.793 - -
46. nadl1.2 695 1.516 - 0.772 - - - 0.744 - - - neural adhesion molecule L1.2, transcript variant X1
47. adcyap1b ENSDARG00000027740 1539 1.516 - 0.767 - - - 0.749 - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
48. sall3a ENSDARG00000079613 257 1.514 - 0.768 - - - 0.746 - - - spalt-like transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-020228-4]
49. si:ch211-278j3.3 ENSDARG00000020284 478 1.513 - 0.750 - - - 0.763 - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
50. C7H4orf48 C7H4orf48 1455 1.508 - 0.752 - - - 0.756 - - -
51. ppp3ca ENSDARG00000004988 615 1.507 - 0.758 - - - 0.749 - - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
52. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.507 - - - - - 0.796 - - 0.711 LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
53. zgc:113531 ENSDARG00000038794 2063 1.506 0.710 - - - - 0.796 - - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
54. KIF26A KIF26A 1077 1.504 - 0.779 - - - 0.725 - - -
55. cdk5r1b ENSDARG00000045087 2075 1.501 - 0.714 - - - 0.787 - - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
56. INA INA 950 1.5 - 0.768 - - - 0.732 - - -
57. NANS NANS 270 1.499 - 0.767 - - - - 0.732 - -
58. scrt1a ENSDARG00000100821 2687 1.498 - 0.769 - - - 0.729 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
59. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.497 - 0.710 - - - 0.787 - - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
60. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.496 - 0.782 - - - - 0.714 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
61. hdac1 ENSDARG00000015427 19804 1.495 - - - - - 0.742 - - 0.753 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
62. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.492 - - - - - 0.769 - - 0.723 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
63. lipg ENSDARG00000031044 1516 1.492 - - - - - 0.746 0.746 - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
64. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.489 - 0.710 - - - 0.779 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
65. si:dkey-7f3.9 ENSDARG00000079008 318 1.489 - 0.701 - - - 0.788 - - - si:dkey-7f3.9 [Source:ZFIN;Acc:ZDB-GENE-100922-197]
66. stmn4l ENSDARG00000043932 654 1.489 - 0.754 - - - 0.735 - - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
67. zfyve21 ENSDARG00000027887 1687 1.488 - 0.745 - - - - - 0.743 - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
68. htatip htatip 1553 1.484 - 0.753 - - - - 0.731 - -
69. fam134c fam134c 1550 1.484 - 0.777 - - - - 0.707 - -
70. CECR2 ENSDARG00000078310 903 1.475 - - - - - 0.761 0.714 - - cat eye syndrome chromosome region, candidate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-533]
71. tox ENSDARG00000032317 9126 1.473 - - - - - 0.731 - - 0.742 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
72. insm1b ENSDARG00000053301 2032 1.47 - - - - - 0.753 - - 0.717 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
73. rap1gap ENSDARG00000056554, ENSDARG00000110356 1284 1.469 - 0.742 - - - - 0.727 - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
74. gap43 ENSDARG00000099744 4114 1.469 - - - - - 0.752 - - 0.717 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
75. arnt2 ENSDARG00000103697 5731 1.468 - - 0.710 - - 0.758 - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
76. nucks1a ENSDARG00000078473 28285 1.468 - - 0.717 - - 0.751 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
77. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.463 - - - - - 0.709 - - 0.754 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
78. emp1 ENSDARG00000069632 251 1.462 - 0.734 - - - 0.728 - - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
79. alkbh6 ENSDARG00000077253 117 1.458 - 0.741 - - - - 0.717 - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
80. vsnl1a ENSDARG00000023228 1584 1.451 - - - - - 0.721 0.730 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
81. hnrnpub ENSDARG00000004735 16496 1.45 - - - - - 0.726 - - 0.724 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
82. ccs ENSDARG00000092003, ENSDARG00000116246 227 1.449 - 0.738 - - - - 0.711 - - copper chaperone for superoxide dismutase [Source:ZFIN;Acc:ZDB-GENE-050417-322]
83. scn4ba ENSDARG00000099031 1634 1.445 - 0.737 - - - 0.708 - - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
84. tuba2 ENSDARG00000045014 1490 1.441 - - - - - 0.731 0.710 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
85. zic1 ENSDARG00000015567 2520 1.439 - - - - - 0.703 - 0.736 - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
86. tmpob ENSDARG00000022978 8121 1.438 - - - - - 0.702 - - 0.736 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
87. ascl1a ENSDARG00000038386 1290 1.436 - - - - - - - 0.735 0.701 achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
88. si:dkey-34m19.3 ENSDARG00000078814 321 1.432 0.723 0.709 - - - - - - - si:dkey-34m19.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2206]
89. NPAS3 ENSDARG00000109820 362 1.429 - - - - - 0.705 - - 0.724 neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
90. pl10 pl10 10795 1.427 - - - - - 0.713 0.714 - -
91. nhlh2 ENSDARG00000025495 1860 1.418 - - - - - 0.715 - - 0.703 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
92. kif5c ENSDARG00000076027 424 1.408 - - - - - 0.702 - 0.706 - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
93. MON1B_1 MON1B_1 697 0.932 - - - - - - 0.932 - -
94. rcor3 ENSDARG00000004502 680 0.932 - - - - - - 0.932 - - REST corepressor 3 [Source:ZFIN;Acc:ZDB-GENE-050208-371]
95. otpb ENSDARG00000058379 1143 0.924 - - - - - - 0.924 - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
96. scdb ENSDARG00000030265 271 0.924 - - - - - - 0.924 - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
97. usf1 ENSDARG00000041689 1619 0.918 - - - - - - 0.918 - - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
98. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 0.918 - - - - - - 0.918 - - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
99. pacsin1b ENSDARG00000042128 1051 0.914 - - - - - 0.914 - - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
100. ccdc9 ENSDARG00000004636 912 0.91 - 0.910 - - - - - - - coiled-coil domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060929-520]

There are 1482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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