Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab11fip3

Gene Name Gene ID Reads Annotation
rab11fip3 ENSDARG00000016490 661 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]










Genes with expression patterns similar to rab11fip3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab11fip3 ENSDARG00000016490 661 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
2. si:ch211-133l11.10 ENSDARG00000005626 381 1.804 - - - 0.815 - - - - 0.989 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
3. DDX47_1 DDX47_1 453 1.752 - - - 0.771 - - - - 0.981
4. lysmd3 ENSDARG00000024693 754 1.751 - 0.796 - - - - - - 0.955 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
5. adam17b ENSDARG00000093093 792 1.722 - - - 0.761 - - - - 0.961 ADAM metallopeptidase domain 17b [Source:ZFIN;Acc:ZDB-GENE-041001-199]
6. ube3d ENSDARG00000026178 244 1.714 - - - - - - 0.723 - 0.991 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
7. CCDC88C ENSDARG00000053713 1026 1.708 - 0.774 - - - - - - 0.934 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
8. ptprk ENSDARG00000063416 742 1.697 - - - 0.707 - - - - 0.990 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
9. memo1 ENSDARG00000010823 1681 1.693 - - - 0.848 - - - - 0.845 mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
10. polr1d ENSDARG00000037570 860 1.678 - 0.742 - - - - - - 0.936 RNA polymerase I and III subunit D [Source:ZFIN;Acc:ZDB-GENE-040930-4]
11. fastkd2 ENSDARG00000074031 748 1.677 - - - 0.720 - - - - 0.957 FAST kinase domains 2 [Source:ZFIN;Acc:ZDB-GENE-090313-7]
12. MIB1 ENSDARG00000102184 3285 1.673 - 0.777 - - - - - - 0.896 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
13. BX088708.1 BX088708.1 6503 1.645 - - - - - - 0.727 - 0.918
14. rassf9 ENSDARG00000074721 448 1.641 - - - 0.800 - - 0.841 - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
15. nr5a2 ENSDARG00000100940 1488 1.609 - - - 0.876 - - 0.733 - - nuclear receptor subfamily 5, group A, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-79]
16. C3H17orf103 C3H17orf103 973 1.599 - - - - - - 0.703 - 0.896
17. fli1b ENSDARG00000040080 348 1.598 0.814 - - - - - 0.784 - - Fli-1 proto-oncogene, ETS transcription factor b [Source:ZFIN;Acc:ZDB-GENE-031114-3]
18. pes ENSDARG00000018902 3286 1.591 - 0.705 - - - - - - 0.886 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
19. mrps2 ENSDARG00000103198 2410 1.59 - - - - - - 0.731 - 0.859 mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
20. si:dkey-272j9.2 si:dkey-272j9.2 91 1.583 - - - 0.812 - - 0.771 - -
21. esrrb ENSDARG00000100847 636 1.583 - - - - - 0.739 0.844 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
22. CABZ01018247.1 CABZ01018247.1 609 1.58 - - - 0.775 - - 0.805 - -
23. SLC3A2 SLC3A2 135 1.561 - - - - - 0.710 0.851 - -
24. brd3a ENSDARG00000006527 1636 1.558 - 0.743 - - - - - - 0.815 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
25. rnf144aa ENSDARG00000020600 768 1.556 - 0.833 - - - 0.723 - - - ring finger protein 144aa [Source:ZFIN;Acc:ZDB-GENE-041001-88]
26. trpm1b ENSDARG00000103476 369 1.546 - - - 0.766 - - 0.780 - - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
27. ms4a17a.9 ENSDARG00000094854 933 1.531 0.714 - - - - - 0.817 - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
28. CU596012.2 CU596012.2 1046 1.522 - - - - - 0.710 0.812 - -
29. sult1st1 ENSDARG00000028275 806 1.514 - 0.762 - 0.752 - - - - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
30. pxk ENSDARG00000063195 851 1.505 - 0.716 - - - - 0.789 - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
31. si:ch211-207j7.2 ENSDARG00000090793 316 1.475 - - - - - 0.710 0.765 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
32. u2af2b ENSDARG00000011740 6946 1.45 - - - - - 0.709 - - 0.741 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
33. GPR141_1 GPR141_1 33 1.432 - - - - - 0.700 0.732 - -
34. si:dkey-27i16.2 ENSDARG00000098293 48 1.423 0.714 - - - - - 0.709 - - si:dkey-27i16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9667]
35. nupl2 ENSDARG00000029043 105 0.996 - - - - - - - - 0.996 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
36. zgc:173480 171 0.996 - - - - - - - - 0.996 zgc:173480
37. abcg1 ENSDARG00000063475 97 0.996 - - - - - - - - 0.996 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
38. oraov1 497 0.995 - - - - - - - - 0.995 oral cancer overexpressed 1
39. PRDM12 PRDM12 133 0.995 - - - - - - - - 0.995
40. CABZ01054405.1 CABZ01054405.1 115 0.995 - - - - - - - - 0.995
41. si:dkey-156k2.6 si:dkey-156k2.6 848 0.994 - - - - - - - - 0.994
42. ZNFX1 ENSDARG00000100280 118 0.994 - - - - - - - - 0.994 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
43. flrt1a 107 0.994 - - - - - - - - 0.994 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
44. slc6a6a ENSDARG00000012534 183 0.994 - - - - - - - - 0.994 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
45. KLF8 ENSDARG00000060661 219 0.993 - - - - - - - - 0.993 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
46. ptn ENSDARG00000102340 229 0.993 - - - - - - - - 0.993 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
47. CTIF ENSDARG00000090617 270 0.993 - - - - - - - - 0.993 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
48. SNAP91 ENSDARG00000098809 556 0.993 - - - - - - - - 0.993 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
49. AKAP12 AKAP12 140 0.992 - - - - - - - - 0.992
50. rxrgb ENSDARG00000004697 332 0.992 - - - - - - - - 0.992 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
51. ltc4s ENSDARG00000062598 138 0.992 - - - - - - - - 0.992 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
52. gpr143 ENSDARG00000034572 559 0.992 - - - - - - - - 0.992 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
53. ZFAT ENSDARG00000077987 205 0.991 - - - - - - - - 0.991 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
54. CR678040.1 CR678040.1 117 0.991 - - - - - - - - 0.991
55. dkk3b ENSDARG00000070683 209 0.991 - - - - - - - - 0.991 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
56. ttc21b ENSDARG00000012368 229 0.991 - - - - - - - - 0.991 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
57. ror1 ENSDARG00000015176 378 0.991 - - - - - - - - 0.991 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
58. CR376785.2 CR376785.2 175 0.99 - - - - - - - - 0.990
59. cenpk ENSDARG00000039616 744 0.99 - - - - - - - - 0.990 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
60. slc25a43 ENSDARG00000102048 489 0.99 - - - - - - - - 0.990 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
61. nrxn3b ENSDARG00000062693 192 0.99 - - - - - - - - 0.990 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
62. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.99 - - - - - - - - 0.990 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
63. ncam2 ENSDARG00000017466 175 0.99 - - - - - - - - 0.990 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
64. nol8 ENSDARG00000044143 425 0.99 - - - - - - - - 0.990 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
65. prmt6 ENSDARG00000069706 484 0.99 - - - - - - - - 0.990 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
66. rnf121 ENSDARG00000060282 1809 0.989 - - - - - - - - 0.989 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
67. RABEPK ENSDARG00000112165 112 0.989 - - - - - - - - 0.989 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
68. pif1 ENSDARG00000020289 216 0.989 - - - - - - - - 0.989 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
69. rcbtb1 ENSDARG00000036645 255 0.988 - - - - - - - - 0.988 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
70. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.988 - - - - - - - - 0.988 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
71. RFFL_1 RFFL_1 157 0.987 - - - - - - - - 0.987
72. jph3 ENSDARG00000102204 175 0.987 - - - - - - - - 0.987 junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
73. AL929322.1 AL929322.1 300 0.987 - - - - - - - - 0.987
74. TAF2 ENSDARG00000102307 1401 0.987 - - - - - - - - 0.987 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
75. trim16 ENSDARG00000010673 519 0.986 - - - - - - - - 0.986 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
76. nsun2 ENSDARG00000056665 740 0.986 - - - - - - - - 0.986 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
77. st8sia5 ENSDARG00000036584 529 0.986 - - - - - - - - 0.986 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
78. vcp ENSDARG00000020008, ENSDARG00000116074 2284 0.986 - - - - - - - - 0.986 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
79. ZNF337_4 ZNF337_4 409 0.986 - - - - - - - - 0.986
80. TUBB8P7_2 TUBB8P7_2 565 0.985 - - - - - - - - 0.985
81. GANAB_1 GANAB_1 685 0.985 - - - - - - - - 0.985
82. CU861453.1 ENSDARG00000097192 271 0.985 - - - - - - - - 0.985
83. hck ENSDARG00000058647 318 0.985 - - - - - - - - 0.985 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]
84. etv1 ENSDARG00000101959 358 0.985 - - - - - - - - 0.985 ets variant 1 [Source:ZFIN;Acc:ZDB-GENE-070104-1]
85. dvl1b ENSDARG00000055552 146 0.985 - - - - - - - - 0.985 dishevelled segment polarity protein 1b [Source:ZFIN;Acc:ZDB-GENE-071004-1]
86. thsd7ba ENSDARG00000095022 231 0.984 - - - - - - - - 0.984 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
87. CEP152 ENSDARG00000075725 391 0.984 - - - - - - - - 0.984 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
88. C7H11orf68 C7H11orf68 446 0.984 - - - - - - - - 0.984
89. umps ENSDARG00000012215 4564 0.984 - - - - - - - - 0.984 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
90. pus7 ENSDARG00000031774 195 0.984 - - - - - - - - 0.984 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
91. hdac10 ENSDARG00000086458 676 0.983 - - - - - - - - 0.983 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
92. pigl ENSDARG00000067752, ENSDARG00000116105 282 0.983 - - - - - - - - 0.983 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
93. brms1lb ENSDARG00000018047 453 0.983 - - - - - - - - 0.983 BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
94. slc16a8 ENSDARG00000045153 478 0.983 - - - - - - - - 0.983 solute carrier family 16 (monocarboxylate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-121128-1]
95. hprt1l ENSDARG00000014866 696 0.983 - - - - - - - - 0.983 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
96. dopey1 438 0.983 - - - - - - - - 0.983 dopey family member 1, transcript variant X4
97. qser1 ENSDARG00000074750 597 0.983 - - - - - - - - 0.983 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
98. sema4ab ENSDARG00000062352 409 0.983 - - - - - - - - 0.983 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
99. mafg2 mafg2 1041 0.983 - - - - - - - - 0.983
100. lsm1 ENSDARG00000043177 767 0.981 - - - - - - - - 0.981 LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]

There are 1198 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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