Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for rab11bb_1

Gene Name Gene ID Reads Annotation
rab11bb_1 ENSDARG00000090086 7 RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]










Genes with expression patterns similar to rab11bb_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab11bb_1 ENSDARG00000090086 7 6 1.000 - - 1.000 - 1.000 1.000 1.000 1.000 RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
2. slc5a9 ENSDARG00000005518 16 2.713 0.802 - - - - 0.911 1.000 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
3. ACAP2 ENSDARG00000060783 9 2.647 - - - - - 0.883 1.000 - 0.764 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
4. BX248582.3 BX248582.3 3 2 - - - - - 1.000 1.000 - -
5. rbfox3l rbfox3l 34 2 - - - - - 1.000 1.000 - -
6. si:dkey-266f7.10 ENSDARG00000086613 7 2 - - - - - 1.000 1.000 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
7. TENM2 ENSDARG00000037122 48 2 - - - - - 1.000 1.000 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
8. slitrk3b ENSDARG00000074739 19 1.956 - - - - - 0.956 1.000 - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
9. C6H3orf18 C6H3orf18 7 1.892 - - - 0.892 - 1.000 - - -
10. ebi3 ENSDARG00000053620 5 1.892 - - - 0.892 - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
11. tecrl2 tecrl2 11 1.883 - - - - - 0.883 1.000 - -
12. lzts1 ENSDARG00000075565 23 1.859 - - - - - - 1.000 - 0.859 leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
13. grm1a ENSDARG00000026796 9 1.852 - - - - - - 1.000 0.852 - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
14. opcml ENSDARG00000013005 18 1.849 - - - - - 0.849 1.000 - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
15. cntnap5b ENSDARG00000075189 16 1.849 - - - - - 0.849 1.000 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
16. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.849 - - - - - 0.849 1.000 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
17. pigf ENSDARG00000032780 7 1.847 - - - 0.847 - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
18. si:ch211-39a7.1 ENSDARG00000037427 31 1.844 - - - - - 1.000 0.844 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
19. si:ch211-151h10.2 ENSDARG00000068250 14 1.839 - - - - - - 1.000 - 0.839 si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
20. CU571169.4 CU571169.4 12 1.821 - - - 0.821 - - 1.000 - -
21. zgc:158463_1 ENSDARG00000089382 23 1.818 - - - - - - 1.000 - 0.818 zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
22. si:dkey-233h12.4 si:dkey-233h12.4 2 1.802 0.802 - - - - - 1.000 - -
23. PFKL PFKL 9 1.802 0.802 - - - - - 1.000 - -
24. CABZ01021435.3 CABZ01021435.3 5 1.802 0.802 - - - - 1.000 - - -
25. CABZ01061873.1 CABZ01061873.1 51 1.791 - - - - - 1.000 0.791 - -
26. gpr173 ENSDARG00000042922 238 1.783 - - - - - 0.783 1.000 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
27. mir92b 95 1.758 - - - - - - 1.000 - 0.758 microRNA 92b
28. itm1 itm1 32 1.75 - - - - - 1.000 - - 0.750
29. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.749 - - - - - 0.973 0.776 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
30. SMARCA4 ENSDARG00000104339 48 1.749 0.749 - - - - - 1.000 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
31. KHNYN ENSDARG00000092488 10 1.747 - - - - - 1.000 - 0.747 - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
32. cacng2a ENSDARG00000032565 99 1.737 - - - - - 0.855 0.882 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
33. st8sia1_1 ENSDARG00000098221 16 1.731 - - - - - 0.849 0.882 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
34. C10H5orf63 C10H5orf63 17 1.702 - - - - - 0.702 1.000 - -
35. nefla ENSDARG00000057568 62 1.675 - - - - - 0.847 0.828 - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
36. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.674 - - - - - 0.751 0.923 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
37. secisbp2 ENSDARG00000073892 79 1.672 0.789 - - - - 0.883 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
38. MPP3_1 MPP3_1 88 1.663 - - - - - 0.795 0.868 - -
39. SLC35F4 ENSDARG00000103124 55 1.655 - - - - - 0.782 0.873 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
40. si:ch211-42i9.5 si:ch211-42i9.5 21 1.651 0.802 - - - - 0.849 - - -
41. amigo3 ENSDARG00000074469 39 1.649 - - - - - 0.790 0.859 - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
42. GPR137B GPR137B 50 1.625 - - - - - 0.849 0.776 - -
43. CABZ01063077.1 CABZ01063077.1 22 1.625 - - - - - 0.702 0.923 - -
44. cd74a ENSDARG00000009087 20 1.61 0.802 - - - - - - - 0.808 CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
45. si:dkey-238f9.1 ENSDARG00000079446 51 1.609 - - - - - 0.765 0.844 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
46. pax6b ENSDARG00000045936 349 1.586 - - - - - 0.744 0.842 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
47. ntrk2a ENSDARG00000059897 185 1.579 - - - - - 0.751 0.828 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
48. gphnb ENSDARG00000100851 118 1.576 - - - - - 0.868 0.708 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
49. ntng1a ENSDARG00000014973 23 1.574 - - - - - 0.849 0.725 - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
50. bsx ENSDARG00000068976, ENSDARG00000110782 139 1.557 0.802 - - - - - - - 0.755 brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
51. nbeaa ENSDARG00000070080 862 1.529 - - - - - - 0.822 0.707 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
52. her2 ENSDARG00000038205 3219 1.52 - - - - - - 0.719 - 0.801 hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
53. Mar-03 Mar-03 44 1.513 0.802 - - - - - - - 0.711
54. GRM8_1 GRM8_1 85 1.502 - - - - - 0.726 0.776 - -
55. npffl ENSDARG00000045016 34 1.495 - - - 0.784 - 0.711 - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
56. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.484 - - - - - - 0.752 - 0.732 SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
57. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.457 - - - - - 0.756 0.701 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
58. ENDOD1_7 ENDOD1_7 33 1 - - - - - - 1.000 - -
59. SHANK1_1 SHANK1_1 0 1 - - - - - - 1.000 - -
60. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
61. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
62. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
63. si:dkey-193c22.1 ENSDARG00000093687 104 1 - - - - - - 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
64. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
65. mir124-1 10 1 - - - - - 1.000 - - - microRNA 124-1
66. ftr14l ENSDARG00000078254 2 1 - - - - - - 1.000 - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
67. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
68. sf3b3 ENSDARG00000103553 57 1 - - - - - - 1.000 - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
69. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
70. mkks ENSDARG00000016139 70 1 - - - - - - 1.000 - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
71. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
72. scd ENSDARG00000033662 146 1 - - - - - - 1.000 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
73. si:dkey-121b10.8 si:dkey-121b10.8 3 1 - - - - - - 1.000 - -
74. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
75. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
76. USF2 ENSDARG00000020228 3 1 - - - - - 1.000 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
77. def6a ENSDARG00000012247 20 1 - - - - - - 1.000 - - differentially expressed in FDCP 6a homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1246]
78. adcyap1a ENSDARG00000004015 67 1 - - - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
79. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
80. oard1 ENSDARG00000057426, ENSDARG00000110693 42 1 1.000 - - - - - - - - O-acyl-ADP-ribose deacylase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-480]
81. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
82. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
83. crabp1a ENSDARG00000045926 99 1 - - - - - - 1.000 - - cellular retinoic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-020320-3]
84. fbxl3b ENSDARG00000021882 58 1 - - - - - - 1.000 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
85. Mar-04 Mar-04 21 1 - - - - - - 1.000 - -
86. si:ch211-263p13.7 ENSDARG00000077622 2 1 - - - - - - 1.000 - - si:ch211-263p13.7 [Source:ZFIN;Acc:ZDB-GENE-091204-336]
87. cdk5r1a ENSDARG00000037916 46 1 - - - - - - 1.000 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
88. zgc:174268 ENSDARG00000076807 250 1 - - - - - - 1.000 - - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
89. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - - 1.000 - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
90. KLF8 ENSDARG00000060661 219 1 - - - - - - 1.000 - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
91. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
92. si:dkeyp-69c1.7 ENSDARG00000087165 31 1 - - - - - - 1.000 - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
93. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
94. PCDH10_1 PCDH10_1 57 1 - - - - - - 1.000 - -
95. ush1g ush1g 0 1 - - - - - - 1.000 - -
96. si:ch73-62b13.1 ENSDARG00000093269 11 1 - - - - - - 1.000 - - si:ch73-62b13.1 [Source:ZFIN;Acc:ZDB-GENE-050420-366]
97. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
98. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
99. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
100. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]

There are 1274 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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