Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for rab11ba

Gene Name Gene ID Reads Annotation
rab11ba ENSDARG00000041878 4651 RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]










Genes with expression patterns similar to rab11ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. rab11ba ENSDARG00000041878 4651 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
2. ankrd13c ENSDARG00000103831 3593 3.471 - 0.937 - - 0.944 0.763 0.827 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
3. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.89 - 0.936 - - - - 0.954 - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
4. atpif1a 6030 1.871 - 0.928 - - 0.943 - - - - ATPase inhibitory factor 1a
5. ap1b1 ENSDARG00000020621 3874 1.831 - - - - 0.948 - 0.883 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
6. eif4ebp2 ENSDARG00000031819 13168 1.821 - 0.945 - - - - 0.876 - - eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
7. abl1 ENSDARG00000035187 3553 1.811 - - - - 0.943 - 0.868 - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
8. srp72 ENSDARG00000014139 5221 1.806 - 0.889 - - - - 0.917 - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
9. tyms ENSDARG00000042894 3068 1.806 - - - - 0.953 - 0.853 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
10. fam20a ENSDARG00000079486 1199 1.804 - 0.938 - - - - 0.866 - - family with sequence similarity 20, member A [Source:ZFIN;Acc:ZDB-GENE-081022-117]
11. etfa ENSDARG00000101631 2946 1.801 - 0.964 - - - - 0.837 - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
12. si:ch211-22i13.2 ENSDARG00000043485 4719 1.791 - - - - 0.933 - 0.858 - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
13. zdhhc5a ENSDARG00000016263 625 1.788 - - - - 0.981 - 0.807 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
14. eny2 ENSDARG00000070046 3741 1.786 - 0.933 - - - - 0.853 - - enhancer of yellow 2 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040718-124]
15. sp1 ENSDARG00000088347 1697 1.785 - 0.932 - - - - 0.853 - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
16. tmem59 ENSDARG00000019033 2692 1.783 - 0.910 - - - - 0.873 - - transmembrane protein 59 [Source:ZFIN;Acc:ZDB-GENE-070912-397]
17. zgc:162816 ENSDARG00000070416 974 1.781 - - - - 0.961 - 0.820 - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
18. cdc14b ENSDARG00000021483 4958 1.774 - - - - 0.949 - 0.825 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
19. pex14 ENSDARG00000028322 1087 1.771 - 0.943 - - - - 0.828 - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
20. tpd52l2b ENSDARG00000013655 9460 1.769 - 0.859 - - - - 0.910 - - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
21. snrnp70 ENSDARG00000077126 5921 1.769 - - - - 0.955 - 0.814 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
22. yy1a ENSDARG00000042796 4982 1.761 - - - - 0.952 0.809 - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
23. arcn1b ENSDARG00000031214 4529 1.75 - 0.961 - - - - - - 0.789 archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
24. kansl3 ENSDARG00000029556 2487 1.748 - - - - 0.941 - 0.807 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
25. klc2 3058 1.745 - - - - 0.955 - 0.790 - - kinesin light chain 2
26. vps26a ENSDARG00000056549, ENSDARG00000110388 2650 1.739 - - - - 0.949 0.790 - - - VPS26, retromer complex component A [Source:ZFIN;Acc:ZDB-GENE-040426-1108]
27. acadsb ENSDARG00000076780 2382 1.728 - 0.921 - - - - 0.807 - - acyl-CoA dehydrogenase short/branched chain [Source:ZFIN;Acc:ZDB-GENE-070410-109]
28. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.724 - - - - 0.961 0.763 - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
29. map1lc3b ENSDARG00000101127 3958 1.723 - 0.916 - - - - - - 0.807 microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
30. calm2b 3890 1.723 - - - - - - 0.882 - 0.841 calmodulin 2b, (phosphorylase kinase, delta)
31. tecrb ENSDARG00000025904 4612 1.71 - 0.934 - - - - 0.776 - - trans-2,3-enoyl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-030131-5154]
32. slc37a2 ENSDARG00000023394 3997 1.695 - - - - 0.944 0.751 - - - solute carrier family 37 (glucose-6-phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1949]
33. psma6a ENSDARG00000019398 2702 1.692 - 0.939 - - - 0.753 - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
34. sf3a1 ENSDARG00000041887 6702 1.692 0.712 - - - 0.980 - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
35. ube2e1 ENSDARG00000116649 10656 1.679 - - - - 0.828 - 0.851 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
36. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.677 - - - - - 0.800 0.877 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
37. cox7a3 20842 1.675 - 0.940 - - - - 0.735 - - cytochrome c oxidase subunit VIIa polypeptide 3
38. elovl5 ENSDARG00000004979 3032 1.675 - 0.856 - - - - 0.819 - - ELOVL fatty acid elongase 5 [Source:ZFIN;Acc:ZDB-GENE-040407-2]
39. aldh2.1 ENSDARG00000089924 2883 1.671 - - - - - 0.789 0.882 - - aldehyde dehydrogenase 2 family member, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1262]
40. erlin1 ENSDARG00000021991 5664 1.668 - 0.948 - - - 0.720 - - - ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
41. zfhx4 ENSDARG00000075542 6927 1.664 - - - - 0.844 0.820 - - - zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
42. ak2 ENSDARG00000005926 7598 1.662 - - - - - 0.749 0.913 - - adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
43. hnrpdl 14288 1.656 - 0.890 - - - - 0.766 - - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
44. ankhd1 ENSDARG00000077860 5510 1.652 - 0.891 - - - - - - 0.761 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
45. celsr1a ENSDARG00000069185 1894 1.649 - - - - - - 0.855 - 0.794 cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
46. tcf12 ENSDARG00000004714 7606 1.642 - - - - - - 0.822 - 0.820 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
47. lsm7 ENSDARG00000058328 7191 1.641 - - - - 0.781 - 0.860 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
48. ppp1cb ENSDARG00000044153 4748 1.626 - - - - - - 0.856 - 0.770 protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
49. gskip ENSDARG00000038099 5059 1.624 - 0.784 - - - - 0.840 - - gsk3b interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2777]
50. aldh1l1 ENSDARG00000077004, ENSDARG00000114342 2113 1.617 - - - - - 0.701 0.916 - - aldehyde dehydrogenase 1 family, member L1 [Source:ZFIN;Acc:ZDB-GENE-100519-4]
51. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.616 - 0.869 - - - - 0.747 - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
52. PRODH_1 PRODH_1 3400 1.597 - - - - - 0.745 0.852 - -
53. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.592 - - - - 0.765 - 0.827 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
54. rnf10 ENSDARG00000079687 6768 1.584 - 0.849 - - - 0.735 - - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
55. DYNC1I2 DYNC1I2 4131 1.583 - - - - - 0.710 0.873 - -
56. sp3b ENSDARG00000007812 2928 1.576 0.707 - - - - - 0.869 - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
57. tmbim4 ENSDARG00000014361 2549 1.573 - - - - - 0.719 0.854 - - transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
58. adpgk2 ENSDARG00000062785 8229 1.557 - - - - - 0.701 0.856 - - ADP-dependent glucokinase 2 [Source:ZFIN;Acc:ZDB-GENE-090609-3]
59. atp6v1e1b ENSDARG00000030694 5452 1.556 - - - - - 0.708 0.848 - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
60. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.555 - - - - - 0.750 0.805 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
61. rps11 ENSDARG00000053058 16233 1.549 - 0.732 - - 0.817 - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
62. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.54 - - - - - - 0.839 - 0.701 nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
63. zgc:100919 zgc:100919 7746 1.523 - 0.803 - - - 0.720 - - -
64. cul4b ENSDARG00000060510 6053 1.505 - - - - - 0.709 - - 0.796 cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
65. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.494 - - - - - - 0.791 0.703 - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
66. serf2 ENSDARG00000074340, ENSDARG00000117120 21385 1.482 - - - - 0.753 0.729 - - - small EDRK-rich factor 2 [Source:ZFIN;Acc:ZDB-GENE-041108-1]
67. anp32b ENSDARG00000023330 25013 1.423 - 0.714 - - - 0.709 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
68. erc1b ENSDARG00000031930 3670 1.423 - - - - - 0.718 - 0.705 - ELKS/RAB6-interacting/CAST family member 1b [Source:ZFIN;Acc:ZDB-GENE-041210-51]
69. rnf44 ENSDARG00000068582 1612 0.983 - - - - 0.983 - - - - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
70. ndfip2 ENSDARG00000033928 3129 0.981 - - - - 0.981 - - - - Nedd4 family interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2662]
71. dido1 ENSDARG00000057940 3819 0.981 - - - - 0.981 - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
72. tcn2l tcn2l 2428 0.98 - - - - 0.980 - - - -
73. slc47a1 ENSDARG00000046012 1426 0.973 - - - - 0.973 - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
74. zcchc9 ENSDARG00000007531 1748 0.965 - - - - 0.965 - - - - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
75. inppl1a ENSDARG00000104222 6256 0.964 - - - - - - 0.964 - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
76. si:dkey-20i20.2 ENSDARG00000071719 659 0.963 - - - - 0.963 - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
77. hif1ab ENSDARG00000034293 10284 0.963 - - - - 0.963 - - - - hypoxia inducible factor 1 subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-040426-706]
78. azi1_1 azi1_1 1375 0.963 - - - - 0.963 - - - -
79. ppme1 ENSDARG00000009771 1697 0.963 - - - - 0.963 - - - - protein phosphatase methylesterase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7064]
80. rhbdd2 ENSDARG00000092463 937 0.962 - - - - 0.962 - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
81. NDST1 NDST1 1584 0.961 - - - - 0.961 - - - -
82. smarcal1 ENSDARG00000102265 1921 0.961 - - - - 0.961 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
83. st3gal4 ENSDARG00000041006 636 0.961 - - - - 0.961 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
84. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.961 - - - - 0.961 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
85. rnf11a ENSDARG00000010442 592 0.961 - - - - 0.961 - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
86. shisa3 ENSDARG00000075467 485 0.961 - - - - 0.961 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
87. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.961 - - - - 0.961 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
88. commd3 ENSDARG00000045402 1601 0.961 - - - - 0.961 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
89. reep3l reep3l 608 0.961 - - - - 0.961 - - - -
90. gli2b ENSDARG00000020884 1468 0.961 - - - - 0.961 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
91. ypel3 ENSDARG00000055510 1344 0.96 - - - - 0.960 - - - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
92. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 0.96 - - - - 0.960 - - - -
93. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.96 - - - - 0.960 - - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
94. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.96 - - - - 0.960 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
95. MATR3 MATR3 3962 0.96 - - - - 0.960 - - - -
96. znf609 znf609 1049 0.96 - - - - 0.960 - - - -
97. emid1 ENSDARG00000076119 862 0.96 - - - - 0.960 - - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
98. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.96 - - - - 0.960 - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
99. unc119.1 ENSDARG00000009629 1193 0.96 - - - - 0.960 - - - - unc-119 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030219-130]
100. foxi3a ENSDARG00000055926 749 0.96 - - - - 0.960 - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]

There are 995 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA